ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1957:A1848

Extra

PDB:
ATOM 1 O3' A A1956 114.050 119.402 92.498 1.00 46.44 O
ATOM 2 P A A1957 114.574 118.914 91.054 1.00 47.18 P
ATOM 3 OP1 A A1957 113.688 117.794 90.718 1.00 47.99 O
ATOM 4 OP2 A A1957 116.047 118.694 91.042 1.00 49.99 O
ATOM 5 O5' A A1957 114.211 120.117 90.072 1.00 47.06 O
ATOM 6 C5' A A1957 112.836 120.368 89.745 1.00 51.51 C
ATOM 7 C4' A A1957 112.673 121.601 88.877 1.00 52.58 C
ATOM 8 O4' A A1957 113.349 122.758 89.390 1.00 54.03 O
ATOM 9 C3' A A1957 112.887 121.533 87.374 1.00 51.46 C
ATOM 10 O3' A A1957 111.643 121.724 86.700 1.00 48.94 O
ATOM 11 C2' A A1957 113.838 122.695 87.084 1.00 53.03 C
ATOM 12 O2' A A1957 113.396 123.396 85.941 1.00 52.75 O
ATOM 13 C1' A A1957 113.696 123.593 88.318 1.00 54.58 C
ATOM 14 N9 A A1957 114.943 124.282 88.670 1.00 57.44 N
ATOM 15 C8 A A1957 116.072 123.768 89.272 1.00 58.54 C
ATOM 16 N7 A A1957 117.039 124.643 89.415 1.00 58.85 N
ATOM 17 C5 A A1957 116.510 125.812 88.882 1.00 59.22 C
ATOM 18 C6 A A1957 117.032 127.111 88.729 1.00 60.53 C
ATOM 19 N6 A A1957 118.265 127.470 89.094 1.00 61.35 N
ATOM 20 N1 A A1957 116.229 128.045 88.173 1.00 60.97 N
ATOM 21 C2 A A1957 114.996 127.688 87.794 1.00 60.22 C
ATOM 22 N3 A A1957 114.401 126.506 87.873 1.00 59.20 N
ATOM 23 C4 A A1957 115.218 125.604 88.433 1.00 58.31 C
ATOM 24 P U A1958 110.558 120.531 86.647 1.00 45.99 P
ATOM 25 OP1 U A1958 111.236 119.270 86.283 1.00 45.69 O
ATOM 26 OP2 U A1958 109.386 120.964 85.860 1.00 46.56 O
ATOM 27 O5' U A1958 110.095 120.450 88.162 1.00 44.81 O
TER

ATOM 1 O3' C B1847 124.111 122.397 96.239 1.00 55.83 O
ATOM 2 P U B1848 124.462 121.580 94.910 1.00 55.00 P
ATOM 3 OP1 U B1848 125.307 120.469 95.387 1.00 56.56 O
ATOM 4 OP2 U B1848 124.972 122.503 93.855 1.00 53.70 O
ATOM 5 O5' U B1848 123.056 120.987 94.461 1.00 56.46 O
ATOM 6 C5' U B1848 122.243 120.259 95.408 1.00 58.02 C
ATOM 7 C4' U B1848 120.860 120.023 94.855 1.00 58.95 C
ATOM 8 O4' U B1848 120.161 121.280 94.690 1.00 59.29 O
ATOM 9 C3' U B1848 120.857 119.401 93.474 1.00 59.43 C
ATOM 10 O3' U B1848 120.966 118.000 93.578 1.00 59.19 O
ATOM 11 C2' U B1848 119.513 119.825 92.914 1.00 60.46 C
ATOM 12 O2' U B1848 118.461 118.990 93.358 1.00 62.45 O
ATOM 13 C1' U B1848 119.391 121.230 93.503 1.00 59.79 C
ATOM 14 N1 U B1848 119.859 122.289 92.598 1.00 59.33 N
ATOM 15 C2 U B1848 118.958 122.759 91.660 1.00 59.69 C
ATOM 16 O2 U B1848 117.858 122.258 91.488 1.00 59.93 O
ATOM 17 N3 U B1848 119.396 123.825 90.915 1.00 58.62 N
ATOM 18 C4 U B1848 120.617 124.429 90.979 1.00 58.38 C
ATOM 19 O4 U B1848 120.811 125.458 90.327 1.00 57.59 O
ATOM 20 C5 U B1848 121.519 123.844 91.925 1.00 59.14 C
ATOM 21 C6 U B1848 121.117 122.821 92.687 1.00 58.70 C
ATOM 22 P G B1849 121.610 117.177 92.378 1.00 60.46 P
ATOM 23 OP1 G B1849 122.749 118.012 91.902 1.00 59.73 O
ATOM 24 OP2 G B1849 120.521 116.817 91.428 1.00 60.87 O
ATOM 25 O5' G B1849 122.127 115.856 93.105 1.00 60.40 O
TER

Atoms:
OP1: (113.688,117.794,90.718)
OP2: (116.047,118.694,91.042)
C3': (112.887,121.533,87.374)
C1': (113.696,123.593,88.318)
C5': (112.836,120.368,89.745)
O4': (113.349,122.758,89.390)
C8: (116.072,123.768,89.272)
O2': (113.396,123.396,85.941)
C6: (117.032,127.111,88.729)
C5: (116.510,125.812,88.882)
C4: (115.218,125.604,88.433)
P: (114.574,118.914,91.054)
C4': (112.673,121.601,88.877)
C2': (113.838,122.695,87.084)
C2: (114.996,127.688,87.794)
N1: (116.229,128.045,88.173)
N3: (114.401,126.506,87.873)
N6: (118.265,127.470,89.094)
N7: (117.039,124.643,89.415)
N9: (114.943,124.282,88.670)
O5': (114.211,120.117,90.072)
O3': (111.643,121.724,86.700)
C4: (120.617,124.429,90.979)
N3: (119.396,123.825,90.915)
OP1: (125.307,120.469,95.387)
OP2: (124.972,122.503,93.855)
C2: (118.958,122.759,91.660)
C1': (119.391,121.230,93.503)
C3': (120.857,119.401,93.474)
O5': (123.056,120.987,94.461)
O4': (120.161,121.280,94.690)
C5': (122.243,120.259,95.408)
P: (124.462,121.580,94.910)
C4': (120.860,120.023,94.855)
C2': (119.513,119.825,92.914)
O2': (118.461,118.990,93.358)
N1: (119.859,122.289,92.598)
O4: (120.811,125.458,90.327)
O2: (117.858,122.258,91.488)
C6: (121.117,122.821,92.687)
C5: (121.519,123.844,91.925)
O3': (120.966,118.000,93.578)
Image (generated by PyMOL):
PyMOL image
show in jmol