Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.828 79.145 67.908 1.00 53.18 O
ATOM 2 P C A1234 5.096 79.294 66.330 1.00 53.81 P
ATOM 3 OP1 C A1234 4.438 78.128 65.674 1.00 55.68 O
ATOM 4 OP2 C A1234 6.543 79.533 66.111 1.00 54.07 O
ATOM 5 O5' C A1234 4.288 80.605 65.931 1.00 50.19 O
ATOM 6 C5' C A1234 2.861 80.604 65.954 1.00 50.68 C
ATOM 7 C4' C A1234 2.321 81.984 65.681 1.00 52.01 C
ATOM 8 O4' C A1234 2.707 82.886 66.750 1.00 53.08 O
ATOM 9 C3' C A1234 2.829 82.684 64.436 1.00 52.07 C
ATOM 10 O3' C A1234 2.199 82.215 63.258 1.00 52.46 O
ATOM 11 C2' C A1234 2.476 84.131 64.744 1.00 53.62 C
ATOM 12 O2' C A1234 1.103 84.409 64.572 1.00 55.49 O
ATOM 13 C1' C A1234 2.811 84.204 66.236 1.00 53.54 C
ATOM 14 N1 C A1234 4.182 84.705 66.458 1.00 53.24 N
ATOM 15 C2 C A1234 4.397 86.087 66.440 1.00 53.39 C
ATOM 16 O2 C A1234 3.425 86.847 66.291 1.00 54.34 O
ATOM 17 N3 C A1234 5.654 86.561 66.588 1.00 53.65 N
ATOM 18 C4 C A1234 6.668 85.716 66.759 1.00 53.00 C
ATOM 19 N4 C A1234 7.889 86.231 66.890 1.00 53.85 N
ATOM 20 C5 C A1234 6.475 84.305 66.803 1.00 52.87 C
ATOM 21 C6 C A1234 5.228 83.848 66.653 1.00 52.42 C
ATOM 22 P U A1235 3.080 81.949 61.943 1.00 53.05 P
ATOM 23 OP1 U A1235 2.179 81.506 60.846 1.00 56.56 O
ATOM 24 OP2 U A1235 4.218 81.090 62.338 1.00 52.62 O
ATOM 25 O5' U A1235 3.623 83.396 61.561 1.00 55.20 O
TER
ATOM 1 O3' A B1239 7.958 97.808 65.958 1.00 92.30 O
ATOM 2 P C B1240 7.315 97.664 67.428 1.00 91.40 P
ATOM 3 OP1 C B1240 7.338 99.008 68.064 1.00 91.10 O
ATOM 4 OP2 C B1240 7.948 96.511 68.123 1.00 92.00 O
ATOM 5 O5' C B1240 5.793 97.293 67.153 1.00 89.47 O
ATOM 6 C5' C B1240 4.989 96.723 68.192 1.00 85.79 C
ATOM 7 C4' C B1240 3.612 96.402 67.673 1.00 82.77 C
ATOM 8 O4' C B1240 3.705 95.513 66.529 1.00 81.98 O
ATOM 9 C3' C B1240 2.760 95.634 68.662 1.00 81.28 C
ATOM 10 O3' C B1240 2.164 96.503 69.606 1.00 79.25 O
ATOM 11 C2' C B1240 1.753 94.943 67.758 1.00 80.87 C
ATOM 12 O2' C B1240 0.716 95.805 67.334 1.00 80.77 O
ATOM 13 C1' C B1240 2.641 94.572 66.567 1.00 80.54 C
ATOM 14 N1 C B1240 3.219 93.216 66.677 1.00 78.97 N
ATOM 15 C2 C B1240 2.367 92.102 66.572 1.00 78.28 C
ATOM 16 O2 C B1240 1.148 92.285 66.397 1.00 79.11 O
ATOM 17 N3 C B1240 2.895 90.859 66.666 1.00 77.41 N
ATOM 18 C4 C B1240 4.208 90.702 66.859 1.00 76.46 C
ATOM 19 N4 C B1240 4.685 89.459 66.948 1.00 75.41 N
ATOM 20 C5 C B1240 5.091 91.813 66.970 1.00 76.88 C
ATOM 21 C6 C B1240 4.561 93.038 66.876 1.00 77.48 C
ATOM 22 P U B1241 2.187 96.110 71.156 1.00 77.83 P
ATOM 23 OP1 U B1241 1.368 97.120 71.871 1.00 78.22 O
ATOM 24 OP2 U B1241 3.597 95.881 71.563 1.00 76.80 O
ATOM 25 O5' U B1241 1.413 94.721 71.196 1.00 76.59 O
TER
ATOM 2 P C A1234 5.096 79.294 66.330 1.00 53.81 P
ATOM 3 OP1 C A1234 4.438 78.128 65.674 1.00 55.68 O
ATOM 4 OP2 C A1234 6.543 79.533 66.111 1.00 54.07 O
ATOM 5 O5' C A1234 4.288 80.605 65.931 1.00 50.19 O
ATOM 6 C5' C A1234 2.861 80.604 65.954 1.00 50.68 C
ATOM 7 C4' C A1234 2.321 81.984 65.681 1.00 52.01 C
ATOM 8 O4' C A1234 2.707 82.886 66.750 1.00 53.08 O
ATOM 9 C3' C A1234 2.829 82.684 64.436 1.00 52.07 C
ATOM 10 O3' C A1234 2.199 82.215 63.258 1.00 52.46 O
ATOM 11 C2' C A1234 2.476 84.131 64.744 1.00 53.62 C
ATOM 12 O2' C A1234 1.103 84.409 64.572 1.00 55.49 O
ATOM 13 C1' C A1234 2.811 84.204 66.236 1.00 53.54 C
ATOM 14 N1 C A1234 4.182 84.705 66.458 1.00 53.24 N
ATOM 15 C2 C A1234 4.397 86.087 66.440 1.00 53.39 C
ATOM 16 O2 C A1234 3.425 86.847 66.291 1.00 54.34 O
ATOM 17 N3 C A1234 5.654 86.561 66.588 1.00 53.65 N
ATOM 18 C4 C A1234 6.668 85.716 66.759 1.00 53.00 C
ATOM 19 N4 C A1234 7.889 86.231 66.890 1.00 53.85 N
ATOM 20 C5 C A1234 6.475 84.305 66.803 1.00 52.87 C
ATOM 21 C6 C A1234 5.228 83.848 66.653 1.00 52.42 C
ATOM 22 P U A1235 3.080 81.949 61.943 1.00 53.05 P
ATOM 23 OP1 U A1235 2.179 81.506 60.846 1.00 56.56 O
ATOM 24 OP2 U A1235 4.218 81.090 62.338 1.00 52.62 O
ATOM 25 O5' U A1235 3.623 83.396 61.561 1.00 55.20 O
TER
ATOM 1 O3' A B1239 7.958 97.808 65.958 1.00 92.30 O
ATOM 2 P C B1240 7.315 97.664 67.428 1.00 91.40 P
ATOM 3 OP1 C B1240 7.338 99.008 68.064 1.00 91.10 O
ATOM 4 OP2 C B1240 7.948 96.511 68.123 1.00 92.00 O
ATOM 5 O5' C B1240 5.793 97.293 67.153 1.00 89.47 O
ATOM 6 C5' C B1240 4.989 96.723 68.192 1.00 85.79 C
ATOM 7 C4' C B1240 3.612 96.402 67.673 1.00 82.77 C
ATOM 8 O4' C B1240 3.705 95.513 66.529 1.00 81.98 O
ATOM 9 C3' C B1240 2.760 95.634 68.662 1.00 81.28 C
ATOM 10 O3' C B1240 2.164 96.503 69.606 1.00 79.25 O
ATOM 11 C2' C B1240 1.753 94.943 67.758 1.00 80.87 C
ATOM 12 O2' C B1240 0.716 95.805 67.334 1.00 80.77 O
ATOM 13 C1' C B1240 2.641 94.572 66.567 1.00 80.54 C
ATOM 14 N1 C B1240 3.219 93.216 66.677 1.00 78.97 N
ATOM 15 C2 C B1240 2.367 92.102 66.572 1.00 78.28 C
ATOM 16 O2 C B1240 1.148 92.285 66.397 1.00 79.11 O
ATOM 17 N3 C B1240 2.895 90.859 66.666 1.00 77.41 N
ATOM 18 C4 C B1240 4.208 90.702 66.859 1.00 76.46 C
ATOM 19 N4 C B1240 4.685 89.459 66.948 1.00 75.41 N
ATOM 20 C5 C B1240 5.091 91.813 66.970 1.00 76.88 C
ATOM 21 C6 C B1240 4.561 93.038 66.876 1.00 77.48 C
ATOM 22 P U B1241 2.187 96.110 71.156 1.00 77.83 P
ATOM 23 OP1 U B1241 1.368 97.120 71.871 1.00 78.22 O
ATOM 24 OP2 U B1241 3.597 95.881 71.563 1.00 76.80 O
ATOM 25 O5' U B1241 1.413 94.721 71.196 1.00 76.59 O
TER
Atoms:
C2: (4.397,86.087,66.440)
OP1: (4.438,78.128,65.674)
OP2: (6.543,79.533,66.111)
C4: (6.668,85.716,66.759)
O5': (4.288,80.605,65.931)
C3': (2.829,82.684,64.436)
C1': (2.811,84.204,66.236)
O4': (2.707,82.886,66.750)
C5': (2.861,80.604,65.954)
P: (5.096,79.294,66.330)
O2: (3.425,86.847,66.291)
C4': (2.321,81.984,65.681)
C2': (2.476,84.131,64.744)
O2': (1.103,84.409,64.572)
N1: (4.182,84.705,66.458)
N3: (5.654,86.561,66.588)
N4: (7.889,86.231,66.890)
C6: (5.228,83.848,66.653)
C5: (6.475,84.305,66.803)
O3': (2.199,82.215,63.258)
OP1: (4.438,78.128,65.674)
OP2: (6.543,79.533,66.111)
C4: (6.668,85.716,66.759)
O5': (4.288,80.605,65.931)
C3': (2.829,82.684,64.436)
C1': (2.811,84.204,66.236)
O4': (2.707,82.886,66.750)
C5': (2.861,80.604,65.954)
P: (5.096,79.294,66.330)
O2: (3.425,86.847,66.291)
C4': (2.321,81.984,65.681)
C2': (2.476,84.131,64.744)
O2': (1.103,84.409,64.572)
N1: (4.182,84.705,66.458)
N3: (5.654,86.561,66.588)
N4: (7.889,86.231,66.890)
C6: (5.228,83.848,66.653)
C5: (6.475,84.305,66.803)
O3': (2.199,82.215,63.258)
C2: (2.367,92.102,66.572)
OP1: (7.338,99.008,68.064)
OP2: (7.948,96.511,68.123)
C4: (4.208,90.702,66.859)
O5': (5.793,97.293,67.153)
C3': (2.760,95.634,68.662)
C1': (2.641,94.572,66.567)
O4': (3.705,95.513,66.529)
C5': (4.989,96.723,68.192)
P: (7.315,97.664,67.428)
O2: (1.148,92.285,66.397)
C4': (3.612,96.402,67.673)
C2': (1.753,94.943,67.758)
O2': (0.716,95.805,67.334)
N1: (3.219,93.216,66.677)
N3: (2.895,90.859,66.666)
N4: (4.685,89.459,66.948)
C6: (4.561,93.038,66.876)
C5: (5.091,91.813,66.970)
O3': (2.164,96.503,69.606)
OP1: (7.338,99.008,68.064)
OP2: (7.948,96.511,68.123)
C4: (4.208,90.702,66.859)
O5': (5.793,97.293,67.153)
C3': (2.760,95.634,68.662)
C1': (2.641,94.572,66.567)
O4': (3.705,95.513,66.529)
C5': (4.989,96.723,68.192)
P: (7.315,97.664,67.428)
O2: (1.148,92.285,66.397)
C4': (3.612,96.402,67.673)
C2': (1.753,94.943,67.758)
O2': (0.716,95.805,67.334)
N1: (3.219,93.216,66.677)
N3: (2.895,90.859,66.666)
N4: (4.685,89.459,66.948)
C6: (4.561,93.038,66.876)
C5: (5.091,91.813,66.970)
O3': (2.164,96.503,69.606)
Image (generated by PyMOL):