Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01056:01044
Extra
PDB:
ATOM 1 O3' U A1055 15.767 92.450 111.043 1.00 41.89 O
ATOM 2 P A A1056 17.165 92.681 111.774 1.00 40.99 P
ATOM 3 OP1 A A1056 17.501 91.474 112.568 1.00 40.82 O
ATOM 4 OP2 A A1056 17.065 94.000 112.444 1.00 39.84 O
ATOM 5 O5' A A1056 18.200 92.805 110.570 1.00 41.67 O
ATOM 6 C5' A A1056 18.667 91.647 109.846 1.00 40.51 C
ATOM 7 C4' A A1056 19.925 91.994 109.077 1.00 40.58 C
ATOM 8 O4' A A1056 19.608 92.961 108.047 1.00 39.97 O
ATOM 9 C3' A A1056 21.025 92.660 109.894 1.00 40.49 C
ATOM 10 O3' A A1056 21.830 91.679 110.545 1.00 40.00 O
ATOM 11 C2' A A1056 21.814 93.426 108.838 1.00 41.21 C
ATOM 12 O2' A A1056 22.753 92.632 108.147 1.00 41.54 O
ATOM 13 C1' A A1056 20.710 93.830 107.858 1.00 41.46 C
ATOM 14 N9 A A1056 20.258 95.217 107.974 1.00 42.51 N
ATOM 15 C8 A A1056 19.106 95.716 108.540 1.00 42.81 C
ATOM 16 N7 A A1056 18.998 97.021 108.456 1.00 42.09 N
ATOM 17 C5 A A1056 20.156 97.408 107.795 1.00 42.60 C
ATOM 18 C6 A A1056 20.640 98.662 107.393 1.00 41.72 C
ATOM 19 N6 A A1056 19.991 99.806 107.595 1.00 41.69 N
ATOM 20 N1 A A1056 21.832 98.699 106.761 1.00 42.31 N
ATOM 21 C2 A A1056 22.480 97.550 106.545 1.00 41.86 C
ATOM 22 N3 A A1056 22.128 96.313 106.866 1.00 40.50 N
ATOM 23 C4 A A1056 20.943 96.309 107.498 1.00 42.34 C
ATOM 24 P A A1057 22.378 91.943 112.028 1.00 39.18 P
ATOM 25 OP1 A A1057 22.954 90.664 112.499 1.00 38.71 O
ATOM 26 OP2 A A1057 21.322 92.605 112.827 1.00 39.11 O
ATOM 27 O5' A A1057 23.558 92.981 111.804 1.00 38.05 O
TER
ATOM 1 O3' C B1043 30.145 91.790 108.593 1.00 35.42 O
ATOM 2 P C B1044 29.516 91.113 107.287 1.00 36.35 P
ATOM 3 OP1 C B1044 29.049 89.770 107.704 1.00 35.91 O
ATOM 4 OP2 C B1044 30.480 91.238 106.177 1.00 36.82 O
ATOM 5 O5' C B1044 28.254 92.021 106.947 1.00 36.71 O
ATOM 6 C5' C B1044 27.115 92.064 107.830 1.00 38.63 C
ATOM 7 C4' C B1044 26.052 92.991 107.286 1.00 39.56 C
ATOM 8 O4' C B1044 26.477 94.376 107.395 1.00 40.78 O
ATOM 9 C3' C B1044 25.703 92.822 105.817 1.00 37.93 C
ATOM 10 O3' C B1044 24.798 91.756 105.617 1.00 36.93 O
ATOM 11 C2' C B1044 25.063 94.159 105.494 1.00 39.14 C
ATOM 12 O2' C B1044 23.729 94.224 105.948 1.00 38.22 O
ATOM 13 C1' C B1044 25.940 95.116 106.310 1.00 41.88 C
ATOM 14 N1 C B1044 27.052 95.658 105.507 1.00 45.45 N
ATOM 15 C2 C B1044 26.785 96.695 104.608 1.00 47.57 C
ATOM 16 O2 C B1044 25.635 97.155 104.546 1.00 48.71 O
ATOM 17 N3 C B1044 27.784 97.173 103.832 1.00 48.52 N
ATOM 18 C4 C B1044 29.013 96.666 103.938 1.00 47.69 C
ATOM 19 N4 C B1044 29.961 97.172 103.148 1.00 47.77 N
ATOM 20 C5 C B1044 29.321 95.621 104.855 1.00 47.48 C
ATOM 21 C6 C B1044 28.321 95.153 105.615 1.00 46.97 C
ATOM 22 P A B1045 24.868 90.892 104.268 1.00 39.23 P
ATOM 23 OP1 A B1045 23.701 89.972 104.252 1.00 39.17 O
ATOM 24 OP2 A B1045 26.236 90.331 104.141 1.00 38.03 O
ATOM 25 O5' A B1045 24.670 91.979 103.125 1.00 37.63 O
TER
ATOM 2 P A A1056 17.165 92.681 111.774 1.00 40.99 P
ATOM 3 OP1 A A1056 17.501 91.474 112.568 1.00 40.82 O
ATOM 4 OP2 A A1056 17.065 94.000 112.444 1.00 39.84 O
ATOM 5 O5' A A1056 18.200 92.805 110.570 1.00 41.67 O
ATOM 6 C5' A A1056 18.667 91.647 109.846 1.00 40.51 C
ATOM 7 C4' A A1056 19.925 91.994 109.077 1.00 40.58 C
ATOM 8 O4' A A1056 19.608 92.961 108.047 1.00 39.97 O
ATOM 9 C3' A A1056 21.025 92.660 109.894 1.00 40.49 C
ATOM 10 O3' A A1056 21.830 91.679 110.545 1.00 40.00 O
ATOM 11 C2' A A1056 21.814 93.426 108.838 1.00 41.21 C
ATOM 12 O2' A A1056 22.753 92.632 108.147 1.00 41.54 O
ATOM 13 C1' A A1056 20.710 93.830 107.858 1.00 41.46 C
ATOM 14 N9 A A1056 20.258 95.217 107.974 1.00 42.51 N
ATOM 15 C8 A A1056 19.106 95.716 108.540 1.00 42.81 C
ATOM 16 N7 A A1056 18.998 97.021 108.456 1.00 42.09 N
ATOM 17 C5 A A1056 20.156 97.408 107.795 1.00 42.60 C
ATOM 18 C6 A A1056 20.640 98.662 107.393 1.00 41.72 C
ATOM 19 N6 A A1056 19.991 99.806 107.595 1.00 41.69 N
ATOM 20 N1 A A1056 21.832 98.699 106.761 1.00 42.31 N
ATOM 21 C2 A A1056 22.480 97.550 106.545 1.00 41.86 C
ATOM 22 N3 A A1056 22.128 96.313 106.866 1.00 40.50 N
ATOM 23 C4 A A1056 20.943 96.309 107.498 1.00 42.34 C
ATOM 24 P A A1057 22.378 91.943 112.028 1.00 39.18 P
ATOM 25 OP1 A A1057 22.954 90.664 112.499 1.00 38.71 O
ATOM 26 OP2 A A1057 21.322 92.605 112.827 1.00 39.11 O
ATOM 27 O5' A A1057 23.558 92.981 111.804 1.00 38.05 O
TER
ATOM 1 O3' C B1043 30.145 91.790 108.593 1.00 35.42 O
ATOM 2 P C B1044 29.516 91.113 107.287 1.00 36.35 P
ATOM 3 OP1 C B1044 29.049 89.770 107.704 1.00 35.91 O
ATOM 4 OP2 C B1044 30.480 91.238 106.177 1.00 36.82 O
ATOM 5 O5' C B1044 28.254 92.021 106.947 1.00 36.71 O
ATOM 6 C5' C B1044 27.115 92.064 107.830 1.00 38.63 C
ATOM 7 C4' C B1044 26.052 92.991 107.286 1.00 39.56 C
ATOM 8 O4' C B1044 26.477 94.376 107.395 1.00 40.78 O
ATOM 9 C3' C B1044 25.703 92.822 105.817 1.00 37.93 C
ATOM 10 O3' C B1044 24.798 91.756 105.617 1.00 36.93 O
ATOM 11 C2' C B1044 25.063 94.159 105.494 1.00 39.14 C
ATOM 12 O2' C B1044 23.729 94.224 105.948 1.00 38.22 O
ATOM 13 C1' C B1044 25.940 95.116 106.310 1.00 41.88 C
ATOM 14 N1 C B1044 27.052 95.658 105.507 1.00 45.45 N
ATOM 15 C2 C B1044 26.785 96.695 104.608 1.00 47.57 C
ATOM 16 O2 C B1044 25.635 97.155 104.546 1.00 48.71 O
ATOM 17 N3 C B1044 27.784 97.173 103.832 1.00 48.52 N
ATOM 18 C4 C B1044 29.013 96.666 103.938 1.00 47.69 C
ATOM 19 N4 C B1044 29.961 97.172 103.148 1.00 47.77 N
ATOM 20 C5 C B1044 29.321 95.621 104.855 1.00 47.48 C
ATOM 21 C6 C B1044 28.321 95.153 105.615 1.00 46.97 C
ATOM 22 P A B1045 24.868 90.892 104.268 1.00 39.23 P
ATOM 23 OP1 A B1045 23.701 89.972 104.252 1.00 39.17 O
ATOM 24 OP2 A B1045 26.236 90.331 104.141 1.00 38.03 O
ATOM 25 O5' A B1045 24.670 91.979 103.125 1.00 37.63 O
TER
Atoms:
OP1: (17.501,91.474,112.568)
OP2: (17.065,94.000,112.444)
C3': (21.025,92.660,109.894)
C1': (20.710,93.830,107.858)
C5': (18.667,91.647,109.846)
O4': (19.608,92.961,108.047)
C8: (19.106,95.716,108.540)
O2': (22.753,92.632,108.147)
C6: (20.640,98.662,107.393)
C5: (20.156,97.408,107.795)
C4: (20.943,96.309,107.498)
P: (17.165,92.681,111.774)
C4': (19.925,91.994,109.077)
C2': (21.814,93.426,108.838)
C2: (22.480,97.550,106.545)
N1: (21.832,98.699,106.761)
N3: (22.128,96.313,106.866)
N6: (19.991,99.806,107.595)
N7: (18.998,97.021,108.456)
N9: (20.258,95.217,107.974)
O5': (18.200,92.805,110.570)
O3': (21.830,91.679,110.545)
OP2: (17.065,94.000,112.444)
C3': (21.025,92.660,109.894)
C1': (20.710,93.830,107.858)
C5': (18.667,91.647,109.846)
O4': (19.608,92.961,108.047)
C8: (19.106,95.716,108.540)
O2': (22.753,92.632,108.147)
C6: (20.640,98.662,107.393)
C5: (20.156,97.408,107.795)
C4: (20.943,96.309,107.498)
P: (17.165,92.681,111.774)
C4': (19.925,91.994,109.077)
C2': (21.814,93.426,108.838)
C2: (22.480,97.550,106.545)
N1: (21.832,98.699,106.761)
N3: (22.128,96.313,106.866)
N6: (19.991,99.806,107.595)
N7: (18.998,97.021,108.456)
N9: (20.258,95.217,107.974)
O5': (18.200,92.805,110.570)
O3': (21.830,91.679,110.545)
C2: (26.785,96.695,104.608)
OP1: (29.049,89.770,107.704)
OP2: (30.480,91.238,106.177)
C4: (29.013,96.666,103.938)
O5': (28.254,92.021,106.947)
C3': (25.703,92.822,105.817)
C1': (25.940,95.116,106.310)
O4': (26.477,94.376,107.395)
C5': (27.115,92.064,107.830)
P: (29.516,91.113,107.287)
O2: (25.635,97.155,104.546)
C4': (26.052,92.991,107.286)
C2': (25.063,94.159,105.494)
O2': (23.729,94.224,105.948)
N1: (27.052,95.658,105.507)
N3: (27.784,97.173,103.832)
N4: (29.961,97.172,103.148)
C6: (28.321,95.153,105.615)
C5: (29.321,95.621,104.855)
O3': (24.798,91.756,105.617)
OP1: (29.049,89.770,107.704)
OP2: (30.480,91.238,106.177)
C4: (29.013,96.666,103.938)
O5': (28.254,92.021,106.947)
C3': (25.703,92.822,105.817)
C1': (25.940,95.116,106.310)
O4': (26.477,94.376,107.395)
C5': (27.115,92.064,107.830)
P: (29.516,91.113,107.287)
O2: (25.635,97.155,104.546)
C4': (26.052,92.991,107.286)
C2': (25.063,94.159,105.494)
O2': (23.729,94.224,105.948)
N1: (27.052,95.658,105.507)
N3: (27.784,97.173,103.832)
N4: (29.961,97.172,103.148)
C6: (28.321,95.153,105.615)
C5: (29.321,95.621,104.855)
O3': (24.798,91.756,105.617)
Image (generated by PyMOL):