Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12283:12300
Extra
PDB:
ATOM 1 O3' G A2282 -7.534 -26.072 169.215 1.00 99.67 O
ATOM 2 P C A2283 -9.038 -25.943 169.750 1.00109.97 P
ATOM 3 OP1 C A2283 -9.239 -27.017 170.763 1.00110.69 O
ATOM 4 OP2 C A2283 -9.931 -25.900 168.561 1.00109.38 O
ATOM 5 O5' C A2283 -9.020 -24.530 170.451 1.00110.34 O
ATOM 6 C5' C A2283 -9.470 -23.395 169.758 1.00109.93 C
ATOM 7 C4' C A2283 -9.003 -22.133 170.416 1.00110.22 C
ATOM 8 O4' C A2283 -8.111 -21.438 169.516 1.00109.51 O
ATOM 9 C3' C A2283 -10.111 -21.143 170.772 1.00110.59 C
ATOM 10 O3' C A2283 -10.532 -21.275 172.128 1.00111.51 O
ATOM 11 C2' C A2283 -9.524 -19.769 170.448 1.00110.27 C
ATOM 12 O2' C A2283 -8.874 -19.213 171.587 1.00110.87 O
ATOM 13 C1' C A2283 -8.465 -20.092 169.390 1.00109.46 C
ATOM 14 N1 C A2283 -8.939 -19.882 168.007 1.00108.68 N
ATOM 15 C2 C A2283 -9.132 -18.597 167.475 1.00108.37 C
ATOM 16 O2 C A2283 -8.952 -17.599 168.191 1.00108.77 O
ATOM 17 N3 C A2283 -9.534 -18.473 166.183 1.00107.66 N
ATOM 18 C4 C A2283 -9.717 -19.570 165.442 1.00107.26 C
ATOM 19 N4 C A2283 -10.113 -19.407 164.182 1.00106.59 N
ATOM 20 C5 C A2283 -9.501 -20.887 165.956 1.00107.56 C
ATOM 21 C6 C A2283 -9.107 -20.994 167.224 1.00108.26 C
ATOM 22 P U A2284 -12.036 -21.726 172.484 1.00122.84 P
ATOM 23 OP1 U A2284 -12.003 -22.325 173.841 1.00122.90 O
ATOM 24 OP2 U A2284 -12.539 -22.555 171.344 1.00122.96 O
ATOM 25 O5' U A2284 -12.805 -20.333 172.526 1.00122.73 O
TER
ATOM 1 O3' A B2299 -13.804 -15.203 156.396 1.00151.21 O
ATOM 2 P C B2300 -13.552 -13.755 157.050 1.00172.94 P
ATOM 3 OP1 C B2300 -14.855 -13.039 157.024 1.00173.19 O
ATOM 4 OP2 C B2300 -12.386 -13.154 156.333 1.00172.35 O
ATOM 5 O5' C B2300 -13.144 -14.090 158.554 1.00173.67 O
ATOM 6 C5' C B2300 -13.274 -13.112 159.577 1.00174.28 C
ATOM 7 C4' C B2300 -12.806 -13.636 160.909 1.00174.92 C
ATOM 8 O4' C B2300 -13.192 -15.024 161.045 1.00175.04 O
ATOM 9 C3' C B2300 -11.298 -13.659 161.148 1.00174.79 C
ATOM 10 O3' C B2300 -10.772 -12.404 161.537 1.00174.95 O
ATOM 11 C2' C B2300 -11.174 -14.697 162.253 1.00175.37 C
ATOM 12 O2' C B2300 -11.524 -14.131 163.506 1.00176.16 O
ATOM 13 C1' C B2300 -12.258 -15.695 161.864 1.00175.33 C
ATOM 14 N1 C B2300 -11.706 -16.852 161.135 1.00174.82 N
ATOM 15 C2 C B2300 -11.219 -17.882 161.940 1.00175.19 C
ATOM 16 O2 C B2300 -11.298 -17.758 163.173 1.00175.91 O
ATOM 17 N3 C B2300 -10.686 -18.986 161.375 1.00174.79 N
ATOM 18 C4 C B2300 -10.626 -19.071 160.050 1.00174.04 C
ATOM 19 N4 C B2300 -10.092 -20.177 159.532 1.00173.68 N
ATOM 20 C5 C B2300 -11.106 -18.030 159.199 1.00173.64 C
ATOM 21 C6 C B2300 -11.634 -16.938 159.774 1.00174.04 C
ATOM 22 P G B2301 -10.129 -11.388 160.468 1.00 92.42 P
ATOM 23 OP1 G B2301 -10.800 -11.640 159.156 1.00 91.79 O
ATOM 24 OP2 G B2301 -8.628 -11.516 160.560 1.00 92.21 O
ATOM 25 O5' G B2301 -10.591 -9.979 161.068 1.00 92.89 O
TER
ATOM 2 P C A2283 -9.038 -25.943 169.750 1.00109.97 P
ATOM 3 OP1 C A2283 -9.239 -27.017 170.763 1.00110.69 O
ATOM 4 OP2 C A2283 -9.931 -25.900 168.561 1.00109.38 O
ATOM 5 O5' C A2283 -9.020 -24.530 170.451 1.00110.34 O
ATOM 6 C5' C A2283 -9.470 -23.395 169.758 1.00109.93 C
ATOM 7 C4' C A2283 -9.003 -22.133 170.416 1.00110.22 C
ATOM 8 O4' C A2283 -8.111 -21.438 169.516 1.00109.51 O
ATOM 9 C3' C A2283 -10.111 -21.143 170.772 1.00110.59 C
ATOM 10 O3' C A2283 -10.532 -21.275 172.128 1.00111.51 O
ATOM 11 C2' C A2283 -9.524 -19.769 170.448 1.00110.27 C
ATOM 12 O2' C A2283 -8.874 -19.213 171.587 1.00110.87 O
ATOM 13 C1' C A2283 -8.465 -20.092 169.390 1.00109.46 C
ATOM 14 N1 C A2283 -8.939 -19.882 168.007 1.00108.68 N
ATOM 15 C2 C A2283 -9.132 -18.597 167.475 1.00108.37 C
ATOM 16 O2 C A2283 -8.952 -17.599 168.191 1.00108.77 O
ATOM 17 N3 C A2283 -9.534 -18.473 166.183 1.00107.66 N
ATOM 18 C4 C A2283 -9.717 -19.570 165.442 1.00107.26 C
ATOM 19 N4 C A2283 -10.113 -19.407 164.182 1.00106.59 N
ATOM 20 C5 C A2283 -9.501 -20.887 165.956 1.00107.56 C
ATOM 21 C6 C A2283 -9.107 -20.994 167.224 1.00108.26 C
ATOM 22 P U A2284 -12.036 -21.726 172.484 1.00122.84 P
ATOM 23 OP1 U A2284 -12.003 -22.325 173.841 1.00122.90 O
ATOM 24 OP2 U A2284 -12.539 -22.555 171.344 1.00122.96 O
ATOM 25 O5' U A2284 -12.805 -20.333 172.526 1.00122.73 O
TER
ATOM 1 O3' A B2299 -13.804 -15.203 156.396 1.00151.21 O
ATOM 2 P C B2300 -13.552 -13.755 157.050 1.00172.94 P
ATOM 3 OP1 C B2300 -14.855 -13.039 157.024 1.00173.19 O
ATOM 4 OP2 C B2300 -12.386 -13.154 156.333 1.00172.35 O
ATOM 5 O5' C B2300 -13.144 -14.090 158.554 1.00173.67 O
ATOM 6 C5' C B2300 -13.274 -13.112 159.577 1.00174.28 C
ATOM 7 C4' C B2300 -12.806 -13.636 160.909 1.00174.92 C
ATOM 8 O4' C B2300 -13.192 -15.024 161.045 1.00175.04 O
ATOM 9 C3' C B2300 -11.298 -13.659 161.148 1.00174.79 C
ATOM 10 O3' C B2300 -10.772 -12.404 161.537 1.00174.95 O
ATOM 11 C2' C B2300 -11.174 -14.697 162.253 1.00175.37 C
ATOM 12 O2' C B2300 -11.524 -14.131 163.506 1.00176.16 O
ATOM 13 C1' C B2300 -12.258 -15.695 161.864 1.00175.33 C
ATOM 14 N1 C B2300 -11.706 -16.852 161.135 1.00174.82 N
ATOM 15 C2 C B2300 -11.219 -17.882 161.940 1.00175.19 C
ATOM 16 O2 C B2300 -11.298 -17.758 163.173 1.00175.91 O
ATOM 17 N3 C B2300 -10.686 -18.986 161.375 1.00174.79 N
ATOM 18 C4 C B2300 -10.626 -19.071 160.050 1.00174.04 C
ATOM 19 N4 C B2300 -10.092 -20.177 159.532 1.00173.68 N
ATOM 20 C5 C B2300 -11.106 -18.030 159.199 1.00173.64 C
ATOM 21 C6 C B2300 -11.634 -16.938 159.774 1.00174.04 C
ATOM 22 P G B2301 -10.129 -11.388 160.468 1.00 92.42 P
ATOM 23 OP1 G B2301 -10.800 -11.640 159.156 1.00 91.79 O
ATOM 24 OP2 G B2301 -8.628 -11.516 160.560 1.00 92.21 O
ATOM 25 O5' G B2301 -10.591 -9.979 161.068 1.00 92.89 O
TER
Atoms:
C2: (-9.132,-18.597,167.475)
OP1: (-9.239,-27.017,170.763)
OP2: (-9.931,-25.900,168.561)
C4: (-9.717,-19.570,165.442)
O5': (-9.020,-24.530,170.451)
C3': (-10.111,-21.143,170.772)
C1': (-8.465,-20.092,169.390)
O4': (-8.111,-21.438,169.516)
C5': (-9.470,-23.395,169.758)
P: (-9.038,-25.943,169.750)
O2: (-8.952,-17.599,168.191)
C4': (-9.003,-22.133,170.416)
C2': (-9.524,-19.769,170.448)
O2': (-8.874,-19.213,171.587)
N1: (-8.939,-19.882,168.007)
N3: (-9.534,-18.473,166.183)
N4: (-10.113,-19.407,164.182)
C6: (-9.107,-20.994,167.224)
C5: (-9.501,-20.887,165.956)
O3': (-10.532,-21.275,172.128)
OP1: (-9.239,-27.017,170.763)
OP2: (-9.931,-25.900,168.561)
C4: (-9.717,-19.570,165.442)
O5': (-9.020,-24.530,170.451)
C3': (-10.111,-21.143,170.772)
C1': (-8.465,-20.092,169.390)
O4': (-8.111,-21.438,169.516)
C5': (-9.470,-23.395,169.758)
P: (-9.038,-25.943,169.750)
O2: (-8.952,-17.599,168.191)
C4': (-9.003,-22.133,170.416)
C2': (-9.524,-19.769,170.448)
O2': (-8.874,-19.213,171.587)
N1: (-8.939,-19.882,168.007)
N3: (-9.534,-18.473,166.183)
N4: (-10.113,-19.407,164.182)
C6: (-9.107,-20.994,167.224)
C5: (-9.501,-20.887,165.956)
O3': (-10.532,-21.275,172.128)
C2: (-11.219,-17.882,161.940)
OP1: (-14.855,-13.039,157.024)
OP2: (-12.386,-13.154,156.333)
C4: (-10.626,-19.071,160.050)
O5': (-13.144,-14.090,158.554)
C3': (-11.298,-13.659,161.148)
C1': (-12.258,-15.695,161.864)
O4': (-13.192,-15.024,161.045)
C5': (-13.274,-13.112,159.577)
P: (-13.552,-13.755,157.050)
O2: (-11.298,-17.758,163.173)
C4': (-12.806,-13.636,160.909)
C2': (-11.174,-14.697,162.253)
O2': (-11.524,-14.131,163.506)
N1: (-11.706,-16.852,161.135)
N3: (-10.686,-18.986,161.375)
N4: (-10.092,-20.177,159.532)
C6: (-11.634,-16.938,159.774)
C5: (-11.106,-18.030,159.199)
O3': (-10.772,-12.404,161.537)
OP1: (-14.855,-13.039,157.024)
OP2: (-12.386,-13.154,156.333)
C4: (-10.626,-19.071,160.050)
O5': (-13.144,-14.090,158.554)
C3': (-11.298,-13.659,161.148)
C1': (-12.258,-15.695,161.864)
O4': (-13.192,-15.024,161.045)
C5': (-13.274,-13.112,159.577)
P: (-13.552,-13.755,157.050)
O2: (-11.298,-17.758,163.173)
C4': (-12.806,-13.636,160.909)
C2': (-11.174,-14.697,162.253)
O2': (-11.524,-14.131,163.506)
N1: (-11.706,-16.852,161.135)
N3: (-10.686,-18.986,161.375)
N4: (-10.092,-20.177,159.532)
C6: (-11.634,-16.938,159.774)
C5: (-11.106,-18.030,159.199)
O3': (-10.772,-12.404,161.537)
Image (generated by PyMOL):