Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.360 97.995 122.045 1.00 66.89 O
ATOM 2 P C A 559 -4.791 97.130 123.331 1.00 67.66 P
ATOM 3 OP1 C A 559 -4.234 97.811 124.527 1.00 68.26 O
ATOM 4 OP2 C A 559 -4.467 95.701 123.079 1.00 66.37 O
ATOM 5 O5' C A 559 -6.375 97.273 123.370 1.00 69.50 O
ATOM 6 C5' C A 559 -7.002 98.546 123.596 1.00 70.42 C
ATOM 7 C4' C A 559 -8.495 98.414 123.436 1.00 72.69 C
ATOM 8 O4' C A 559 -8.796 98.025 122.068 1.00 71.45 O
ATOM 9 C3' C A 559 -9.127 97.316 124.275 1.00 74.40 C
ATOM 10 O3' C A 559 -9.366 97.732 125.617 1.00 76.91 O
ATOM 11 C2' C A 559 -10.398 97.007 123.497 1.00 73.06 C
ATOM 12 O2' C A 559 -11.410 97.969 123.720 1.00 74.60 O
ATOM 13 C1' C A 559 -9.895 97.126 122.055 1.00 70.89 C
ATOM 14 N1 C A 559 -9.446 95.844 121.474 1.00 68.53 N
ATOM 15 C2 C A 559 -10.392 95.007 120.851 1.00 67.81 C
ATOM 16 O2 C A 559 -11.582 95.364 120.805 1.00 67.84 O
ATOM 17 N3 C A 559 -9.981 93.830 120.316 1.00 66.36 N
ATOM 18 C4 C A 559 -8.696 93.475 120.388 1.00 64.95 C
ATOM 19 N4 C A 559 -8.337 92.303 119.850 1.00 62.69 N
ATOM 20 C5 C A 559 -7.719 94.303 121.014 1.00 65.65 C
ATOM 21 C6 C A 559 -8.132 95.466 121.536 1.00 66.89 C
ATOM 22 P G A 560 -9.161 96.683 126.819 1.00 79.30 P
ATOM 23 OP1 G A 560 -9.511 97.388 128.079 1.00 78.64 O
ATOM 24 OP2 G A 560 -7.821 96.057 126.681 1.00 78.84 O
ATOM 25 O5' G A 560 -10.264 95.567 126.530 1.00 79.61 O
TER
ATOM 1 O3' C B 573 -10.587 83.022 116.436 1.00 66.81 O
ATOM 2 P C B 574 -10.586 83.848 115.057 1.00 67.36 P
ATOM 3 OP1 C B 574 -11.564 83.207 114.140 1.00 67.27 O
ATOM 4 OP2 C B 574 -9.174 83.999 114.624 1.00 69.13 O
ATOM 5 O5' C B 574 -11.138 85.284 115.475 1.00 66.07 O
ATOM 6 C5' C B 574 -12.505 85.463 115.875 1.00 65.24 C
ATOM 7 C4' C B 574 -12.722 86.868 116.380 1.00 66.15 C
ATOM 8 O4' C B 574 -11.890 87.102 117.545 1.00 67.51 O
ATOM 9 C3' C B 574 -12.337 87.981 115.424 1.00 67.29 C
ATOM 10 O3' C B 574 -13.377 88.216 114.486 1.00 69.02 O
ATOM 11 C2' C B 574 -12.114 89.157 116.370 1.00 67.21 C
ATOM 12 O2' C B 574 -13.312 89.772 116.795 1.00 67.79 O
ATOM 13 C1' C B 574 -11.466 88.459 117.568 1.00 66.62 C
ATOM 14 N1 C B 574 -9.989 88.489 117.547 1.00 65.68 N
ATOM 15 C2 C B 574 -9.316 89.588 118.122 1.00 66.02 C
ATOM 16 O2 C B 574 -9.980 90.514 118.631 1.00 64.80 O
ATOM 17 N3 C B 574 -7.963 89.612 118.101 1.00 65.33 N
ATOM 18 C4 C B 574 -7.284 88.607 117.534 1.00 65.34 C
ATOM 19 N4 C B 574 -5.950 88.677 117.528 1.00 65.03 N
ATOM 20 C5 C B 574 -7.941 87.487 116.947 1.00 64.65 C
ATOM 21 C6 C B 574 -9.277 87.468 116.977 1.00 65.00 C
ATOM 22 P A B 575 -13.022 88.743 113.010 1.00 68.88 P
ATOM 23 OP1 A B 575 -12.428 90.100 113.143 1.00 69.03 O
ATOM 24 OP2 A B 575 -14.238 88.555 112.179 1.00 69.80 O
ATOM 25 O5' A B 575 -11.912 87.731 112.477 1.00 67.26 O
TER
ATOM 2 P C A 559 -4.791 97.130 123.331 1.00 67.66 P
ATOM 3 OP1 C A 559 -4.234 97.811 124.527 1.00 68.26 O
ATOM 4 OP2 C A 559 -4.467 95.701 123.079 1.00 66.37 O
ATOM 5 O5' C A 559 -6.375 97.273 123.370 1.00 69.50 O
ATOM 6 C5' C A 559 -7.002 98.546 123.596 1.00 70.42 C
ATOM 7 C4' C A 559 -8.495 98.414 123.436 1.00 72.69 C
ATOM 8 O4' C A 559 -8.796 98.025 122.068 1.00 71.45 O
ATOM 9 C3' C A 559 -9.127 97.316 124.275 1.00 74.40 C
ATOM 10 O3' C A 559 -9.366 97.732 125.617 1.00 76.91 O
ATOM 11 C2' C A 559 -10.398 97.007 123.497 1.00 73.06 C
ATOM 12 O2' C A 559 -11.410 97.969 123.720 1.00 74.60 O
ATOM 13 C1' C A 559 -9.895 97.126 122.055 1.00 70.89 C
ATOM 14 N1 C A 559 -9.446 95.844 121.474 1.00 68.53 N
ATOM 15 C2 C A 559 -10.392 95.007 120.851 1.00 67.81 C
ATOM 16 O2 C A 559 -11.582 95.364 120.805 1.00 67.84 O
ATOM 17 N3 C A 559 -9.981 93.830 120.316 1.00 66.36 N
ATOM 18 C4 C A 559 -8.696 93.475 120.388 1.00 64.95 C
ATOM 19 N4 C A 559 -8.337 92.303 119.850 1.00 62.69 N
ATOM 20 C5 C A 559 -7.719 94.303 121.014 1.00 65.65 C
ATOM 21 C6 C A 559 -8.132 95.466 121.536 1.00 66.89 C
ATOM 22 P G A 560 -9.161 96.683 126.819 1.00 79.30 P
ATOM 23 OP1 G A 560 -9.511 97.388 128.079 1.00 78.64 O
ATOM 24 OP2 G A 560 -7.821 96.057 126.681 1.00 78.84 O
ATOM 25 O5' G A 560 -10.264 95.567 126.530 1.00 79.61 O
TER
ATOM 1 O3' C B 573 -10.587 83.022 116.436 1.00 66.81 O
ATOM 2 P C B 574 -10.586 83.848 115.057 1.00 67.36 P
ATOM 3 OP1 C B 574 -11.564 83.207 114.140 1.00 67.27 O
ATOM 4 OP2 C B 574 -9.174 83.999 114.624 1.00 69.13 O
ATOM 5 O5' C B 574 -11.138 85.284 115.475 1.00 66.07 O
ATOM 6 C5' C B 574 -12.505 85.463 115.875 1.00 65.24 C
ATOM 7 C4' C B 574 -12.722 86.868 116.380 1.00 66.15 C
ATOM 8 O4' C B 574 -11.890 87.102 117.545 1.00 67.51 O
ATOM 9 C3' C B 574 -12.337 87.981 115.424 1.00 67.29 C
ATOM 10 O3' C B 574 -13.377 88.216 114.486 1.00 69.02 O
ATOM 11 C2' C B 574 -12.114 89.157 116.370 1.00 67.21 C
ATOM 12 O2' C B 574 -13.312 89.772 116.795 1.00 67.79 O
ATOM 13 C1' C B 574 -11.466 88.459 117.568 1.00 66.62 C
ATOM 14 N1 C B 574 -9.989 88.489 117.547 1.00 65.68 N
ATOM 15 C2 C B 574 -9.316 89.588 118.122 1.00 66.02 C
ATOM 16 O2 C B 574 -9.980 90.514 118.631 1.00 64.80 O
ATOM 17 N3 C B 574 -7.963 89.612 118.101 1.00 65.33 N
ATOM 18 C4 C B 574 -7.284 88.607 117.534 1.00 65.34 C
ATOM 19 N4 C B 574 -5.950 88.677 117.528 1.00 65.03 N
ATOM 20 C5 C B 574 -7.941 87.487 116.947 1.00 64.65 C
ATOM 21 C6 C B 574 -9.277 87.468 116.977 1.00 65.00 C
ATOM 22 P A B 575 -13.022 88.743 113.010 1.00 68.88 P
ATOM 23 OP1 A B 575 -12.428 90.100 113.143 1.00 69.03 O
ATOM 24 OP2 A B 575 -14.238 88.555 112.179 1.00 69.80 O
ATOM 25 O5' A B 575 -11.912 87.731 112.477 1.00 67.26 O
TER
Atoms:
C2: (-10.392,95.007,120.851)
OP1: (-4.234,97.811,124.527)
OP2: (-4.467,95.701,123.079)
C4: (-8.696,93.475,120.388)
O5': (-6.375,97.273,123.370)
C3': (-9.127,97.316,124.275)
C1': (-9.895,97.126,122.055)
O4': (-8.796,98.025,122.068)
C5': (-7.002,98.546,123.596)
P: (-4.791,97.130,123.331)
O2: (-11.582,95.364,120.805)
C4': (-8.495,98.414,123.436)
C2': (-10.398,97.007,123.497)
O2': (-11.410,97.969,123.720)
N1: (-9.446,95.844,121.474)
N3: (-9.981,93.830,120.316)
N4: (-8.337,92.303,119.850)
C6: (-8.132,95.466,121.536)
C5: (-7.719,94.303,121.014)
O3': (-9.366,97.732,125.617)
OP1: (-4.234,97.811,124.527)
OP2: (-4.467,95.701,123.079)
C4: (-8.696,93.475,120.388)
O5': (-6.375,97.273,123.370)
C3': (-9.127,97.316,124.275)
C1': (-9.895,97.126,122.055)
O4': (-8.796,98.025,122.068)
C5': (-7.002,98.546,123.596)
P: (-4.791,97.130,123.331)
O2: (-11.582,95.364,120.805)
C4': (-8.495,98.414,123.436)
C2': (-10.398,97.007,123.497)
O2': (-11.410,97.969,123.720)
N1: (-9.446,95.844,121.474)
N3: (-9.981,93.830,120.316)
N4: (-8.337,92.303,119.850)
C6: (-8.132,95.466,121.536)
C5: (-7.719,94.303,121.014)
O3': (-9.366,97.732,125.617)
C2: (-9.316,89.588,118.122)
OP1: (-11.564,83.207,114.140)
OP2: (-9.174,83.999,114.624)
C4: (-7.284,88.607,117.534)
O5': (-11.138,85.284,115.475)
C3': (-12.337,87.981,115.424)
C1': (-11.466,88.459,117.568)
O4': (-11.890,87.102,117.545)
C5': (-12.505,85.463,115.875)
P: (-10.586,83.848,115.057)
O2: (-9.980,90.514,118.631)
C4': (-12.722,86.868,116.380)
C2': (-12.114,89.157,116.370)
O2': (-13.312,89.772,116.795)
N1: (-9.989,88.489,117.547)
N3: (-7.963,89.612,118.101)
N4: (-5.950,88.677,117.528)
C6: (-9.277,87.468,116.977)
C5: (-7.941,87.487,116.947)
O3': (-13.377,88.216,114.486)
OP1: (-11.564,83.207,114.140)
OP2: (-9.174,83.999,114.624)
C4: (-7.284,88.607,117.534)
O5': (-11.138,85.284,115.475)
C3': (-12.337,87.981,115.424)
C1': (-11.466,88.459,117.568)
O4': (-11.890,87.102,117.545)
C5': (-12.505,85.463,115.875)
P: (-10.586,83.848,115.057)
O2: (-9.980,90.514,118.631)
C4': (-12.722,86.868,116.380)
C2': (-12.114,89.157,116.370)
O2': (-13.312,89.772,116.795)
N1: (-9.989,88.489,117.547)
N3: (-7.963,89.612,118.101)
N4: (-5.950,88.677,117.528)
C6: (-9.277,87.468,116.977)
C5: (-7.941,87.487,116.947)
O3': (-13.377,88.216,114.486)
Image (generated by PyMOL):