Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A181:A432
Extra
PDB:
ATOM 1 O3' A A 180 -52.944 -62.434 54.806 1.00 16.45 O
ATOM 2 P A A 181 -53.856 -61.259 55.355 1.00 6.54 P
ATOM 3 OP1 A A 181 -54.733 -60.849 54.227 1.00 6.54 O
ATOM 4 OP2 A A 181 -52.961 -60.247 55.986 1.00 6.54 O
ATOM 5 O5' A A 181 -54.707 -62.009 56.462 1.00 6.54 O
ATOM 6 C5' A A 181 -55.591 -63.035 56.069 1.00 6.54 C
ATOM 7 C4' A A 181 -55.959 -63.912 57.210 1.00 6.54 C
ATOM 8 O4' A A 181 -54.770 -64.324 57.914 1.00 6.54 O
ATOM 9 C3' A A 181 -56.805 -63.269 58.275 1.00 6.54 C
ATOM 10 O3' A A 181 -58.160 -63.169 57.902 1.00 6.54 O
ATOM 11 C2' A A 181 -56.558 -64.177 59.459 1.00 6.54 C
ATOM 12 O2' A A 181 -57.309 -65.374 59.328 1.00 6.54 O
ATOM 13 C1' A A 181 -55.073 -64.509 59.273 1.00 6.54 C
ATOM 14 N9 A A 181 -54.188 -63.631 60.060 1.00 6.46 N
ATOM 15 C8 A A 181 -53.349 -62.659 59.575 1.00 6.46 C
ATOM 16 N7 A A 181 -52.641 -62.020 60.496 1.00 6.46 N
ATOM 17 C5 A A 181 -53.043 -62.627 61.654 1.00 6.46 C
ATOM 18 C6 A A 181 -52.651 -62.408 62.964 1.00 6.46 C
ATOM 19 N6 A A 181 -51.760 -61.496 63.293 1.00 6.46 N
ATOM 20 N1 A A 181 -53.207 -63.154 63.918 1.00 6.46 N
ATOM 21 C2 A A 181 -54.096 -64.071 63.534 1.00 6.46 C
ATOM 22 N3 A A 181 -54.552 -64.392 62.322 1.00 6.46 N
ATOM 23 C4 A A 181 -53.978 -63.615 61.409 1.00 6.46 C
ATOM 24 P C A 182 -59.026 -61.919 58.392 1.00 0.01 P
ATOM 25 OP1 C A 182 -60.398 -62.090 57.857 1.00 0.01 O
ATOM 26 OP2 C A 182 -58.276 -60.705 58.039 1.00 0.01 O
ATOM 27 O5' C A 182 -59.040 -62.140 59.963 1.00 0.01 O
TER
ATOM 1 O3' A B 431 -62.796 -67.291 64.264 1.00 0.01 O
ATOM 2 P C B 432 -62.182 -68.703 63.845 1.00 0.01 P
ATOM 3 OP1 C B 432 -62.992 -69.175 62.722 1.00 0.01 O
ATOM 4 OP2 C B 432 -62.093 -69.541 65.061 1.00 0.01 O
ATOM 5 O5' C B 432 -60.718 -68.316 63.341 1.00 0.01 O
ATOM 6 C5' C B 432 -60.531 -67.393 62.281 1.00 0.01 C
ATOM 7 C4' C B 432 -59.119 -66.854 62.248 1.00 0.01 C
ATOM 8 O4' C B 432 -58.759 -66.294 63.536 1.00 0.01 O
ATOM 9 C3' C B 432 -58.040 -67.863 61.979 1.00 0.01 C
ATOM 10 O3' C B 432 -57.913 -68.130 60.621 1.00 0.01 O
ATOM 11 C2' C B 432 -56.804 -67.211 62.571 1.00 0.01 C
ATOM 12 O2' C B 432 -56.260 -66.260 61.674 1.00 0.01 O
ATOM 13 C1' C B 432 -57.381 -66.474 63.768 1.00 0.01 C
ATOM 14 N1 C B 432 -57.221 -67.222 65.006 1.00 0.01 N
ATOM 15 C2 C B 432 -56.059 -67.128 65.740 1.00 0.01 C
ATOM 16 O2 C B 432 -55.143 -66.438 65.337 1.00 0.01 O
ATOM 17 N3 C B 432 -55.954 -67.797 66.896 1.00 0.01 N
ATOM 18 C4 C B 432 -56.953 -68.541 67.349 1.00 0.01 C
ATOM 19 N4 C B 432 -56.797 -69.189 68.504 1.00 0.01 N
ATOM 20 C5 C B 432 -58.158 -68.651 66.606 1.00 0.01 C
ATOM 21 C6 C B 432 -58.252 -67.980 65.451 1.00 0.01 C
ATOM 22 P U B 433 -57.271 -69.498 60.139 1.00 8.20 P
ATOM 23 OP1 U B 433 -57.497 -69.570 58.682 1.00 8.20 O
ATOM 24 OP2 U B 433 -57.816 -70.556 60.993 1.00 8.20 O
ATOM 25 O5' U B 433 -55.725 -69.304 60.458 1.00 8.20 O
TER
ATOM 2 P A A 181 -53.856 -61.259 55.355 1.00 6.54 P
ATOM 3 OP1 A A 181 -54.733 -60.849 54.227 1.00 6.54 O
ATOM 4 OP2 A A 181 -52.961 -60.247 55.986 1.00 6.54 O
ATOM 5 O5' A A 181 -54.707 -62.009 56.462 1.00 6.54 O
ATOM 6 C5' A A 181 -55.591 -63.035 56.069 1.00 6.54 C
ATOM 7 C4' A A 181 -55.959 -63.912 57.210 1.00 6.54 C
ATOM 8 O4' A A 181 -54.770 -64.324 57.914 1.00 6.54 O
ATOM 9 C3' A A 181 -56.805 -63.269 58.275 1.00 6.54 C
ATOM 10 O3' A A 181 -58.160 -63.169 57.902 1.00 6.54 O
ATOM 11 C2' A A 181 -56.558 -64.177 59.459 1.00 6.54 C
ATOM 12 O2' A A 181 -57.309 -65.374 59.328 1.00 6.54 O
ATOM 13 C1' A A 181 -55.073 -64.509 59.273 1.00 6.54 C
ATOM 14 N9 A A 181 -54.188 -63.631 60.060 1.00 6.46 N
ATOM 15 C8 A A 181 -53.349 -62.659 59.575 1.00 6.46 C
ATOM 16 N7 A A 181 -52.641 -62.020 60.496 1.00 6.46 N
ATOM 17 C5 A A 181 -53.043 -62.627 61.654 1.00 6.46 C
ATOM 18 C6 A A 181 -52.651 -62.408 62.964 1.00 6.46 C
ATOM 19 N6 A A 181 -51.760 -61.496 63.293 1.00 6.46 N
ATOM 20 N1 A A 181 -53.207 -63.154 63.918 1.00 6.46 N
ATOM 21 C2 A A 181 -54.096 -64.071 63.534 1.00 6.46 C
ATOM 22 N3 A A 181 -54.552 -64.392 62.322 1.00 6.46 N
ATOM 23 C4 A A 181 -53.978 -63.615 61.409 1.00 6.46 C
ATOM 24 P C A 182 -59.026 -61.919 58.392 1.00 0.01 P
ATOM 25 OP1 C A 182 -60.398 -62.090 57.857 1.00 0.01 O
ATOM 26 OP2 C A 182 -58.276 -60.705 58.039 1.00 0.01 O
ATOM 27 O5' C A 182 -59.040 -62.140 59.963 1.00 0.01 O
TER
ATOM 1 O3' A B 431 -62.796 -67.291 64.264 1.00 0.01 O
ATOM 2 P C B 432 -62.182 -68.703 63.845 1.00 0.01 P
ATOM 3 OP1 C B 432 -62.992 -69.175 62.722 1.00 0.01 O
ATOM 4 OP2 C B 432 -62.093 -69.541 65.061 1.00 0.01 O
ATOM 5 O5' C B 432 -60.718 -68.316 63.341 1.00 0.01 O
ATOM 6 C5' C B 432 -60.531 -67.393 62.281 1.00 0.01 C
ATOM 7 C4' C B 432 -59.119 -66.854 62.248 1.00 0.01 C
ATOM 8 O4' C B 432 -58.759 -66.294 63.536 1.00 0.01 O
ATOM 9 C3' C B 432 -58.040 -67.863 61.979 1.00 0.01 C
ATOM 10 O3' C B 432 -57.913 -68.130 60.621 1.00 0.01 O
ATOM 11 C2' C B 432 -56.804 -67.211 62.571 1.00 0.01 C
ATOM 12 O2' C B 432 -56.260 -66.260 61.674 1.00 0.01 O
ATOM 13 C1' C B 432 -57.381 -66.474 63.768 1.00 0.01 C
ATOM 14 N1 C B 432 -57.221 -67.222 65.006 1.00 0.01 N
ATOM 15 C2 C B 432 -56.059 -67.128 65.740 1.00 0.01 C
ATOM 16 O2 C B 432 -55.143 -66.438 65.337 1.00 0.01 O
ATOM 17 N3 C B 432 -55.954 -67.797 66.896 1.00 0.01 N
ATOM 18 C4 C B 432 -56.953 -68.541 67.349 1.00 0.01 C
ATOM 19 N4 C B 432 -56.797 -69.189 68.504 1.00 0.01 N
ATOM 20 C5 C B 432 -58.158 -68.651 66.606 1.00 0.01 C
ATOM 21 C6 C B 432 -58.252 -67.980 65.451 1.00 0.01 C
ATOM 22 P U B 433 -57.271 -69.498 60.139 1.00 8.20 P
ATOM 23 OP1 U B 433 -57.497 -69.570 58.682 1.00 8.20 O
ATOM 24 OP2 U B 433 -57.816 -70.556 60.993 1.00 8.20 O
ATOM 25 O5' U B 433 -55.725 -69.304 60.458 1.00 8.20 O
TER
Atoms:
OP1: (-54.733,-60.849,54.227)
OP2: (-52.961,-60.247,55.986)
C3': (-56.805,-63.269,58.275)
C1': (-55.073,-64.509,59.273)
C5': (-55.591,-63.035,56.069)
O4': (-54.770,-64.324,57.914)
C8: (-53.349,-62.659,59.575)
O2': (-57.309,-65.374,59.328)
C6: (-52.651,-62.408,62.964)
C5: (-53.043,-62.627,61.654)
C4: (-53.978,-63.615,61.409)
P: (-53.856,-61.259,55.355)
C4': (-55.959,-63.912,57.210)
C2': (-56.558,-64.177,59.459)
C2: (-54.096,-64.071,63.534)
N1: (-53.207,-63.154,63.918)
N3: (-54.552,-64.392,62.322)
N6: (-51.760,-61.496,63.293)
N7: (-52.641,-62.020,60.496)
N9: (-54.188,-63.631,60.060)
O5': (-54.707,-62.009,56.462)
O3': (-58.160,-63.169,57.902)
OP2: (-52.961,-60.247,55.986)
C3': (-56.805,-63.269,58.275)
C1': (-55.073,-64.509,59.273)
C5': (-55.591,-63.035,56.069)
O4': (-54.770,-64.324,57.914)
C8: (-53.349,-62.659,59.575)
O2': (-57.309,-65.374,59.328)
C6: (-52.651,-62.408,62.964)
C5: (-53.043,-62.627,61.654)
C4: (-53.978,-63.615,61.409)
P: (-53.856,-61.259,55.355)
C4': (-55.959,-63.912,57.210)
C2': (-56.558,-64.177,59.459)
C2: (-54.096,-64.071,63.534)
N1: (-53.207,-63.154,63.918)
N3: (-54.552,-64.392,62.322)
N6: (-51.760,-61.496,63.293)
N7: (-52.641,-62.020,60.496)
N9: (-54.188,-63.631,60.060)
O5': (-54.707,-62.009,56.462)
O3': (-58.160,-63.169,57.902)
C2: (-56.059,-67.128,65.740)
OP1: (-62.992,-69.175,62.722)
OP2: (-62.093,-69.541,65.061)
C4: (-56.953,-68.541,67.349)
O5': (-60.718,-68.316,63.341)
C3': (-58.040,-67.863,61.979)
C1': (-57.381,-66.474,63.768)
O4': (-58.759,-66.294,63.536)
C5': (-60.531,-67.393,62.281)
P: (-62.182,-68.703,63.845)
O2: (-55.143,-66.438,65.337)
C4': (-59.119,-66.854,62.248)
C2': (-56.804,-67.211,62.571)
O2': (-56.260,-66.260,61.674)
N1: (-57.221,-67.222,65.006)
N3: (-55.954,-67.797,66.896)
N4: (-56.797,-69.189,68.504)
C6: (-58.252,-67.980,65.451)
C5: (-58.158,-68.651,66.606)
O3': (-57.913,-68.130,60.621)
OP1: (-62.992,-69.175,62.722)
OP2: (-62.093,-69.541,65.061)
C4: (-56.953,-68.541,67.349)
O5': (-60.718,-68.316,63.341)
C3': (-58.040,-67.863,61.979)
C1': (-57.381,-66.474,63.768)
O4': (-58.759,-66.294,63.536)
C5': (-60.531,-67.393,62.281)
P: (-62.182,-68.703,63.845)
O2: (-55.143,-66.438,65.337)
C4': (-59.119,-66.854,62.248)
C2': (-56.804,-67.211,62.571)
O2': (-56.260,-66.260,61.674)
N1: (-57.221,-67.222,65.006)
N3: (-55.954,-67.797,66.896)
N4: (-56.797,-69.189,68.504)
C6: (-58.252,-67.980,65.451)
C5: (-58.158,-68.651,66.606)
O3': (-57.913,-68.130,60.621)
Image (generated by PyMOL):