Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11546:11441
Extra
PDB:
ATOM 1 O3' U A1545 50.195 50.096 124.474 1.00 60.62 O
ATOM 2 P A A1546 50.517 51.075 123.236 1.00 65.87 P
ATOM 3 OP1 A A1546 52.003 51.264 123.177 1.00 66.01 O
ATOM 4 OP2 A A1546 49.658 52.274 123.392 1.00 66.36 O
ATOM 5 O5' A A1546 50.057 50.225 121.977 1.00 65.03 O
ATOM 6 C5' A A1546 49.855 50.849 120.716 1.00 64.78 C
ATOM 7 C4' A A1546 49.923 49.845 119.610 1.00 63.99 C
ATOM 8 O4' A A1546 51.283 49.435 119.435 1.00 63.84 O
ATOM 9 C3' A A1546 49.152 48.570 119.858 1.00 63.55 C
ATOM 10 O3' A A1546 47.816 48.673 119.410 1.00 63.37 O
ATOM 11 C2' A A1546 49.958 47.499 119.129 1.00 62.93 C
ATOM 12 O2' A A1546 49.573 47.436 117.758 1.00 62.39 O
ATOM 13 C1' A A1546 51.368 48.061 119.197 1.00 63.24 C
ATOM 14 N9 A A1546 52.217 47.488 120.255 1.00 63.47 N
ATOM 15 C8 A A1546 52.425 48.059 121.486 1.00 64.16 C
ATOM 16 N7 A A1546 53.335 47.447 122.204 1.00 64.27 N
ATOM 17 C5 A A1546 53.796 46.438 121.375 1.00 63.62 C
ATOM 18 C6 A A1546 54.784 45.444 121.550 1.00 63.41 C
ATOM 19 N6 A A1546 55.502 45.276 122.662 1.00 63.83 N
ATOM 20 N1 A A1546 54.996 44.594 120.526 1.00 62.73 N
ATOM 21 C2 A A1546 54.265 44.779 119.422 1.00 62.33 C
ATOM 22 N3 A A1546 53.330 45.675 119.132 1.00 62.48 N
ATOM 23 C4 A A1546 53.133 46.477 120.163 1.00 63.13 C
ATOM 24 P A A1547 46.624 48.082 120.291 1.00 54.85 P
ATOM 25 OP1 A A1547 45.368 48.402 119.572 1.00 54.66 O
ATOM 26 OP2 A A1547 46.805 48.565 121.680 1.00 55.56 O
ATOM 27 O5' A A1547 46.884 46.547 120.237 1.00 54.27 O
TER
ATOM 1 O3' C B1440 46.598 41.530 113.445 1.00 57.00 O
ATOM 2 P C B1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 3 OP1 C B1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 4 OP2 C B1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 5 O5' C B1441 48.487 43.056 113.931 1.00 54.87 O
ATOM 6 C5' C B1441 48.003 43.751 115.051 1.00 55.46 C
ATOM 7 C4' C B1441 49.111 44.069 115.977 1.00 55.93 C
ATOM 8 O4' C B1441 49.579 42.856 116.593 1.00 55.75 O
ATOM 9 C3' C B1441 50.339 44.654 115.333 1.00 55.98 C
ATOM 10 O3' C B1441 50.222 46.033 115.138 1.00 56.40 O
ATOM 11 C2' C B1441 51.427 44.302 116.315 1.00 56.25 C
ATOM 12 O2' C B1441 51.389 45.207 117.402 1.00 56.95 O
ATOM 13 C1' C B1441 50.963 42.934 116.809 1.00 55.93 C
ATOM 14 N1 C B1441 51.597 41.804 116.086 1.00 55.34 N
ATOM 15 C2 C B1441 52.856 41.311 116.443 1.00 55.38 C
ATOM 16 O2 C B1441 53.468 41.865 117.327 1.00 55.91 O
ATOM 17 N3 C B1441 53.405 40.240 115.823 1.00 54.86 N
ATOM 18 C4 C B1441 52.735 39.636 114.852 1.00 54.29 C
ATOM 19 N4 C B1441 53.318 38.592 114.273 1.00 53.81 N
ATOM 20 C5 C B1441 51.438 40.096 114.461 1.00 54.22 C
ATOM 21 C6 C B1441 50.906 41.154 115.097 1.00 54.75 C
ATOM 22 P A B1442 51.011 46.726 113.945 1.00 60.36 P
ATOM 23 OP1 A B1442 50.470 48.113 113.810 1.00 60.79 O
ATOM 24 OP2 A B1442 50.907 45.809 112.794 1.00 59.64 O
ATOM 25 O5' A B1442 52.525 46.749 114.483 1.00 60.63 O
TER
ATOM 2 P A A1546 50.517 51.075 123.236 1.00 65.87 P
ATOM 3 OP1 A A1546 52.003 51.264 123.177 1.00 66.01 O
ATOM 4 OP2 A A1546 49.658 52.274 123.392 1.00 66.36 O
ATOM 5 O5' A A1546 50.057 50.225 121.977 1.00 65.03 O
ATOM 6 C5' A A1546 49.855 50.849 120.716 1.00 64.78 C
ATOM 7 C4' A A1546 49.923 49.845 119.610 1.00 63.99 C
ATOM 8 O4' A A1546 51.283 49.435 119.435 1.00 63.84 O
ATOM 9 C3' A A1546 49.152 48.570 119.858 1.00 63.55 C
ATOM 10 O3' A A1546 47.816 48.673 119.410 1.00 63.37 O
ATOM 11 C2' A A1546 49.958 47.499 119.129 1.00 62.93 C
ATOM 12 O2' A A1546 49.573 47.436 117.758 1.00 62.39 O
ATOM 13 C1' A A1546 51.368 48.061 119.197 1.00 63.24 C
ATOM 14 N9 A A1546 52.217 47.488 120.255 1.00 63.47 N
ATOM 15 C8 A A1546 52.425 48.059 121.486 1.00 64.16 C
ATOM 16 N7 A A1546 53.335 47.447 122.204 1.00 64.27 N
ATOM 17 C5 A A1546 53.796 46.438 121.375 1.00 63.62 C
ATOM 18 C6 A A1546 54.784 45.444 121.550 1.00 63.41 C
ATOM 19 N6 A A1546 55.502 45.276 122.662 1.00 63.83 N
ATOM 20 N1 A A1546 54.996 44.594 120.526 1.00 62.73 N
ATOM 21 C2 A A1546 54.265 44.779 119.422 1.00 62.33 C
ATOM 22 N3 A A1546 53.330 45.675 119.132 1.00 62.48 N
ATOM 23 C4 A A1546 53.133 46.477 120.163 1.00 63.13 C
ATOM 24 P A A1547 46.624 48.082 120.291 1.00 54.85 P
ATOM 25 OP1 A A1547 45.368 48.402 119.572 1.00 54.66 O
ATOM 26 OP2 A A1547 46.805 48.565 121.680 1.00 55.56 O
ATOM 27 O5' A A1547 46.884 46.547 120.237 1.00 54.27 O
TER
ATOM 1 O3' C B1440 46.598 41.530 113.445 1.00 57.00 O
ATOM 2 P C B1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 3 OP1 C B1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 4 OP2 C B1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 5 O5' C B1441 48.487 43.056 113.931 1.00 54.87 O
ATOM 6 C5' C B1441 48.003 43.751 115.051 1.00 55.46 C
ATOM 7 C4' C B1441 49.111 44.069 115.977 1.00 55.93 C
ATOM 8 O4' C B1441 49.579 42.856 116.593 1.00 55.75 O
ATOM 9 C3' C B1441 50.339 44.654 115.333 1.00 55.98 C
ATOM 10 O3' C B1441 50.222 46.033 115.138 1.00 56.40 O
ATOM 11 C2' C B1441 51.427 44.302 116.315 1.00 56.25 C
ATOM 12 O2' C B1441 51.389 45.207 117.402 1.00 56.95 O
ATOM 13 C1' C B1441 50.963 42.934 116.809 1.00 55.93 C
ATOM 14 N1 C B1441 51.597 41.804 116.086 1.00 55.34 N
ATOM 15 C2 C B1441 52.856 41.311 116.443 1.00 55.38 C
ATOM 16 O2 C B1441 53.468 41.865 117.327 1.00 55.91 O
ATOM 17 N3 C B1441 53.405 40.240 115.823 1.00 54.86 N
ATOM 18 C4 C B1441 52.735 39.636 114.852 1.00 54.29 C
ATOM 19 N4 C B1441 53.318 38.592 114.273 1.00 53.81 N
ATOM 20 C5 C B1441 51.438 40.096 114.461 1.00 54.22 C
ATOM 21 C6 C B1441 50.906 41.154 115.097 1.00 54.75 C
ATOM 22 P A B1442 51.011 46.726 113.945 1.00 60.36 P
ATOM 23 OP1 A B1442 50.470 48.113 113.810 1.00 60.79 O
ATOM 24 OP2 A B1442 50.907 45.809 112.794 1.00 59.64 O
ATOM 25 O5' A B1442 52.525 46.749 114.483 1.00 60.63 O
TER
Atoms:
OP1: (52.003,51.264,123.177)
OP2: (49.658,52.274,123.392)
C3': (49.152,48.570,119.858)
C1': (51.368,48.061,119.197)
C5': (49.855,50.849,120.716)
O4': (51.283,49.435,119.435)
C8: (52.425,48.059,121.486)
O2': (49.573,47.436,117.758)
C6: (54.784,45.444,121.550)
C5: (53.796,46.438,121.375)
C4: (53.133,46.477,120.163)
P: (50.517,51.075,123.236)
C4': (49.923,49.845,119.610)
C2': (49.958,47.499,119.129)
C2: (54.265,44.779,119.422)
N1: (54.996,44.594,120.526)
N3: (53.330,45.675,119.132)
N6: (55.502,45.276,122.662)
N7: (53.335,47.447,122.204)
N9: (52.217,47.488,120.255)
O5': (50.057,50.225,121.977)
O3': (47.816,48.673,119.410)
OP2: (49.658,52.274,123.392)
C3': (49.152,48.570,119.858)
C1': (51.368,48.061,119.197)
C5': (49.855,50.849,120.716)
O4': (51.283,49.435,119.435)
C8: (52.425,48.059,121.486)
O2': (49.573,47.436,117.758)
C6: (54.784,45.444,121.550)
C5: (53.796,46.438,121.375)
C4: (53.133,46.477,120.163)
P: (50.517,51.075,123.236)
C4': (49.923,49.845,119.610)
C2': (49.958,47.499,119.129)
C2: (54.265,44.779,119.422)
N1: (54.996,44.594,120.526)
N3: (53.330,45.675,119.132)
N6: (55.502,45.276,122.662)
N7: (53.335,47.447,122.204)
N9: (52.217,47.488,120.255)
O5': (50.057,50.225,121.977)
O3': (47.816,48.673,119.410)
C2: (52.856,41.311,116.443)
OP1: (46.596,43.800,112.446)
OP2: (48.307,42.003,111.558)
C4: (52.735,39.636,114.852)
O5': (48.487,43.056,113.931)
C3': (50.339,44.654,115.333)
C1': (50.963,42.934,116.809)
O4': (49.579,42.856,116.593)
C5': (48.003,43.751,115.051)
P: (47.508,42.656,112.745)
O2: (53.468,41.865,117.327)
C4': (49.111,44.069,115.977)
C2': (51.427,44.302,116.315)
O2': (51.389,45.207,117.402)
N1: (51.597,41.804,116.086)
N3: (53.405,40.240,115.823)
N4: (53.318,38.592,114.273)
C6: (50.906,41.154,115.097)
C5: (51.438,40.096,114.461)
O3': (50.222,46.033,115.138)
OP1: (46.596,43.800,112.446)
OP2: (48.307,42.003,111.558)
C4: (52.735,39.636,114.852)
O5': (48.487,43.056,113.931)
C3': (50.339,44.654,115.333)
C1': (50.963,42.934,116.809)
O4': (49.579,42.856,116.593)
C5': (48.003,43.751,115.051)
P: (47.508,42.656,112.745)
O2: (53.468,41.865,117.327)
C4': (49.111,44.069,115.977)
C2': (51.427,44.302,116.315)
O2': (51.389,45.207,117.402)
N1: (51.597,41.804,116.086)
N3: (53.405,40.240,115.823)
N4: (53.318,38.592,114.273)
C6: (50.906,41.154,115.097)
C5: (51.438,40.096,114.461)
O3': (50.222,46.033,115.138)
Image (generated by PyMOL):