Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCL:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.288 99.254 122.393 1.00 83.62 O
ATOM 2 P C A 559 -4.860 98.330 123.573 1.00 85.64 P
ATOM 3 OP1 C A 559 -4.431 98.941 124.861 1.00 86.18 O
ATOM 4 OP2 C A 559 -4.520 96.906 123.279 1.00 83.32 O
ATOM 5 O5' C A 559 -6.434 98.521 123.445 1.00 85.07 O
ATOM 6 C5' C A 559 -7.049 99.784 123.751 1.00 86.99 C
ATOM 7 C4' C A 559 -8.547 99.649 123.690 1.00 88.37 C
ATOM 8 O4' C A 559 -8.918 99.291 122.333 1.00 88.03 O
ATOM 9 C3' C A 559 -9.115 98.523 124.542 1.00 89.97 C
ATOM 10 O3' C A 559 -9.309 98.913 125.901 1.00 91.58 O
ATOM 11 C2' C A 559 -10.414 98.197 123.821 1.00 88.78 C
ATOM 12 O2' C A 559 -11.441 99.124 124.116 1.00 89.26 O
ATOM 13 C1' C A 559 -9.985 98.357 122.360 1.00 87.27 C
ATOM 14 N1 C A 559 -9.502 97.103 121.762 1.00 85.37 N
ATOM 15 C2 C A 559 -10.417 96.277 121.107 1.00 85.35 C
ATOM 16 O2 C A 559 -11.607 96.631 121.046 1.00 85.48 O
ATOM 17 N3 C A 559 -9.985 95.116 120.554 1.00 84.47 N
ATOM 18 C4 C A 559 -8.696 94.777 120.639 1.00 83.26 C
ATOM 19 N4 C A 559 -8.314 93.624 120.078 1.00 82.27 N
ATOM 20 C5 C A 559 -7.741 95.604 121.302 1.00 82.83 C
ATOM 21 C6 C A 559 -8.183 96.747 121.844 1.00 83.82 C
ATOM 22 P G A 560 -9.142 97.823 127.073 1.00 92.58 P
ATOM 23 OP1 G A 560 -9.553 98.480 128.339 1.00 91.86 O
ATOM 24 OP2 G A 560 -7.791 97.223 126.967 1.00 92.84 O
ATOM 25 O5' G A 560 -10.221 96.705 126.720 1.00 92.24 O
TER
ATOM 1 O3' C B 573 -10.667 84.281 116.699 1.00 73.31 O
ATOM 2 P C B 574 -10.669 85.152 115.353 1.00 75.09 P
ATOM 3 OP1 C B 574 -11.676 84.567 114.429 1.00 73.88 O
ATOM 4 OP2 C B 574 -9.259 85.275 114.913 1.00 76.81 O
ATOM 5 O5' C B 574 -11.187 86.584 115.816 1.00 70.53 O
ATOM 6 C5' C B 574 -12.562 86.782 116.137 1.00 68.58 C
ATOM 7 C4' C B 574 -12.768 88.156 116.700 1.00 68.64 C
ATOM 8 O4' C B 574 -11.913 88.327 117.854 1.00 69.06 O
ATOM 9 C3' C B 574 -12.382 89.295 115.781 1.00 69.35 C
ATOM 10 O3' C B 574 -13.448 89.581 114.888 1.00 71.63 O
ATOM 11 C2' C B 574 -12.127 90.433 116.762 1.00 69.72 C
ATOM 12 O2' C B 574 -13.309 91.081 117.189 1.00 68.32 O
ATOM 13 C1' C B 574 -11.495 89.681 117.940 1.00 70.49 C
ATOM 14 N1 C B 574 -10.019 89.713 117.960 1.00 72.14 N
ATOM 15 C2 C B 574 -9.371 90.820 118.540 1.00 71.80 C
ATOM 16 O2 C B 574 -10.056 91.740 119.019 1.00 70.22 O
ATOM 17 N3 C B 574 -8.018 90.856 118.555 1.00 72.18 N
ATOM 18 C4 C B 574 -7.316 89.854 118.014 1.00 72.84 C
ATOM 19 N4 C B 574 -5.984 89.943 118.030 1.00 73.99 N
ATOM 20 C5 C B 574 -7.948 88.718 117.425 1.00 72.16 C
ATOM 21 C6 C B 574 -9.287 88.688 117.422 1.00 72.56 C
ATOM 22 P A B 575 -13.135 90.180 113.434 1.00 73.64 P
ATOM 23 OP1 A B 575 -12.619 91.562 113.625 1.00 74.05 O
ATOM 24 OP2 A B 575 -14.313 89.960 112.565 1.00 72.92 O
ATOM 25 O5' A B 575 -11.965 89.252 112.887 1.00 72.26 O
TER
ATOM 2 P C A 559 -4.860 98.330 123.573 1.00 85.64 P
ATOM 3 OP1 C A 559 -4.431 98.941 124.861 1.00 86.18 O
ATOM 4 OP2 C A 559 -4.520 96.906 123.279 1.00 83.32 O
ATOM 5 O5' C A 559 -6.434 98.521 123.445 1.00 85.07 O
ATOM 6 C5' C A 559 -7.049 99.784 123.751 1.00 86.99 C
ATOM 7 C4' C A 559 -8.547 99.649 123.690 1.00 88.37 C
ATOM 8 O4' C A 559 -8.918 99.291 122.333 1.00 88.03 O
ATOM 9 C3' C A 559 -9.115 98.523 124.542 1.00 89.97 C
ATOM 10 O3' C A 559 -9.309 98.913 125.901 1.00 91.58 O
ATOM 11 C2' C A 559 -10.414 98.197 123.821 1.00 88.78 C
ATOM 12 O2' C A 559 -11.441 99.124 124.116 1.00 89.26 O
ATOM 13 C1' C A 559 -9.985 98.357 122.360 1.00 87.27 C
ATOM 14 N1 C A 559 -9.502 97.103 121.762 1.00 85.37 N
ATOM 15 C2 C A 559 -10.417 96.277 121.107 1.00 85.35 C
ATOM 16 O2 C A 559 -11.607 96.631 121.046 1.00 85.48 O
ATOM 17 N3 C A 559 -9.985 95.116 120.554 1.00 84.47 N
ATOM 18 C4 C A 559 -8.696 94.777 120.639 1.00 83.26 C
ATOM 19 N4 C A 559 -8.314 93.624 120.078 1.00 82.27 N
ATOM 20 C5 C A 559 -7.741 95.604 121.302 1.00 82.83 C
ATOM 21 C6 C A 559 -8.183 96.747 121.844 1.00 83.82 C
ATOM 22 P G A 560 -9.142 97.823 127.073 1.00 92.58 P
ATOM 23 OP1 G A 560 -9.553 98.480 128.339 1.00 91.86 O
ATOM 24 OP2 G A 560 -7.791 97.223 126.967 1.00 92.84 O
ATOM 25 O5' G A 560 -10.221 96.705 126.720 1.00 92.24 O
TER
ATOM 1 O3' C B 573 -10.667 84.281 116.699 1.00 73.31 O
ATOM 2 P C B 574 -10.669 85.152 115.353 1.00 75.09 P
ATOM 3 OP1 C B 574 -11.676 84.567 114.429 1.00 73.88 O
ATOM 4 OP2 C B 574 -9.259 85.275 114.913 1.00 76.81 O
ATOM 5 O5' C B 574 -11.187 86.584 115.816 1.00 70.53 O
ATOM 6 C5' C B 574 -12.562 86.782 116.137 1.00 68.58 C
ATOM 7 C4' C B 574 -12.768 88.156 116.700 1.00 68.64 C
ATOM 8 O4' C B 574 -11.913 88.327 117.854 1.00 69.06 O
ATOM 9 C3' C B 574 -12.382 89.295 115.781 1.00 69.35 C
ATOM 10 O3' C B 574 -13.448 89.581 114.888 1.00 71.63 O
ATOM 11 C2' C B 574 -12.127 90.433 116.762 1.00 69.72 C
ATOM 12 O2' C B 574 -13.309 91.081 117.189 1.00 68.32 O
ATOM 13 C1' C B 574 -11.495 89.681 117.940 1.00 70.49 C
ATOM 14 N1 C B 574 -10.019 89.713 117.960 1.00 72.14 N
ATOM 15 C2 C B 574 -9.371 90.820 118.540 1.00 71.80 C
ATOM 16 O2 C B 574 -10.056 91.740 119.019 1.00 70.22 O
ATOM 17 N3 C B 574 -8.018 90.856 118.555 1.00 72.18 N
ATOM 18 C4 C B 574 -7.316 89.854 118.014 1.00 72.84 C
ATOM 19 N4 C B 574 -5.984 89.943 118.030 1.00 73.99 N
ATOM 20 C5 C B 574 -7.948 88.718 117.425 1.00 72.16 C
ATOM 21 C6 C B 574 -9.287 88.688 117.422 1.00 72.56 C
ATOM 22 P A B 575 -13.135 90.180 113.434 1.00 73.64 P
ATOM 23 OP1 A B 575 -12.619 91.562 113.625 1.00 74.05 O
ATOM 24 OP2 A B 575 -14.313 89.960 112.565 1.00 72.92 O
ATOM 25 O5' A B 575 -11.965 89.252 112.887 1.00 72.26 O
TER
Atoms:
C2: (-10.417,96.277,121.107)
OP1: (-4.431,98.941,124.861)
OP2: (-4.520,96.906,123.279)
C4: (-8.696,94.777,120.639)
O5': (-6.434,98.521,123.445)
C3': (-9.115,98.523,124.542)
C1': (-9.985,98.357,122.360)
O4': (-8.918,99.291,122.333)
C5': (-7.049,99.784,123.751)
P: (-4.860,98.330,123.573)
O2: (-11.607,96.631,121.046)
C4': (-8.547,99.649,123.690)
C2': (-10.414,98.197,123.821)
O2': (-11.441,99.124,124.116)
N1: (-9.502,97.103,121.762)
N3: (-9.985,95.116,120.554)
N4: (-8.314,93.624,120.078)
C6: (-8.183,96.747,121.844)
C5: (-7.741,95.604,121.302)
O3': (-9.309,98.913,125.901)
OP1: (-4.431,98.941,124.861)
OP2: (-4.520,96.906,123.279)
C4: (-8.696,94.777,120.639)
O5': (-6.434,98.521,123.445)
C3': (-9.115,98.523,124.542)
C1': (-9.985,98.357,122.360)
O4': (-8.918,99.291,122.333)
C5': (-7.049,99.784,123.751)
P: (-4.860,98.330,123.573)
O2: (-11.607,96.631,121.046)
C4': (-8.547,99.649,123.690)
C2': (-10.414,98.197,123.821)
O2': (-11.441,99.124,124.116)
N1: (-9.502,97.103,121.762)
N3: (-9.985,95.116,120.554)
N4: (-8.314,93.624,120.078)
C6: (-8.183,96.747,121.844)
C5: (-7.741,95.604,121.302)
O3': (-9.309,98.913,125.901)
C2: (-9.371,90.820,118.540)
OP1: (-11.676,84.567,114.429)
OP2: (-9.259,85.275,114.913)
C4: (-7.316,89.854,118.014)
O5': (-11.187,86.584,115.816)
C3': (-12.382,89.295,115.781)
C1': (-11.495,89.681,117.940)
O4': (-11.913,88.327,117.854)
C5': (-12.562,86.782,116.137)
P: (-10.669,85.152,115.353)
O2: (-10.056,91.740,119.019)
C4': (-12.768,88.156,116.700)
C2': (-12.127,90.433,116.762)
O2': (-13.309,91.081,117.189)
N1: (-10.019,89.713,117.960)
N3: (-8.018,90.856,118.555)
N4: (-5.984,89.943,118.030)
C6: (-9.287,88.688,117.422)
C5: (-7.948,88.718,117.425)
O3': (-13.448,89.581,114.888)
OP1: (-11.676,84.567,114.429)
OP2: (-9.259,85.275,114.913)
C4: (-7.316,89.854,118.014)
O5': (-11.187,86.584,115.816)
C3': (-12.382,89.295,115.781)
C1': (-11.495,89.681,117.940)
O4': (-11.913,88.327,117.854)
C5': (-12.562,86.782,116.137)
P: (-10.669,85.152,115.353)
O2: (-10.056,91.740,119.019)
C4': (-12.768,88.156,116.700)
C2': (-12.127,90.433,116.762)
O2': (-13.309,91.081,117.189)
N1: (-10.019,89.713,117.960)
N3: (-8.018,90.856,118.555)
N4: (-5.984,89.943,118.030)
C6: (-9.287,88.688,117.422)
C5: (-7.948,88.718,117.425)
O3': (-13.448,89.581,114.888)
Image (generated by PyMOL):