Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0279:0349
Extra
PDB:
ATOM 1 O3' C A 278 61.480 129.013 -1.887 1.00 98.59 O
ATOM 2 P C A 279 60.381 129.464 -0.804 1.00 97.43 P
ATOM 3 OP1 C A 279 60.152 130.919 -0.991 1.00 97.14 O
ATOM 4 OP2 C A 279 60.806 128.953 0.524 1.00 97.37 O
ATOM 5 O5' C A 279 59.060 128.689 -1.247 1.00 97.19 O
ATOM 6 C5' C A 279 58.475 128.906 -2.549 1.00 96.64 C
ATOM 7 C4' C A 279 57.259 128.023 -2.745 1.00 96.23 C
ATOM 8 O4' C A 279 57.646 126.624 -2.726 1.00 96.08 O
ATOM 9 C3' C A 279 56.175 128.125 -1.684 1.00 95.43 C
ATOM 10 O3' C A 279 55.318 129.235 -1.925 1.00 94.46 O
ATOM 11 C2' C A 279 55.439 126.800 -1.843 1.00 95.52 C
ATOM 12 O2' C A 279 54.524 126.807 -2.922 1.00 94.98 O
ATOM 13 C1' C A 279 56.595 125.849 -2.167 1.00 95.66 C
ATOM 14 N1 C A 279 57.117 125.108 -1.000 1.00 95.73 N
ATOM 15 C2 C A 279 56.362 124.040 -0.477 1.00 95.76 C
ATOM 16 O2 C A 279 55.253 123.774 -0.977 1.00 95.56 O
ATOM 17 N3 C A 279 56.858 123.332 0.565 1.00 95.72 N
ATOM 18 C4 C A 279 58.042 123.658 1.092 1.00 96.21 C
ATOM 19 N4 C A 279 58.498 122.922 2.110 1.00 96.60 N
ATOM 20 C5 C A 279 58.814 124.751 0.597 1.00 95.96 C
ATOM 21 C6 C A 279 58.320 125.440 -0.438 1.00 95.59 C
ATOM 22 P G A 280 54.658 130.014 -0.688 1.00 94.02 P
ATOM 23 OP1 G A 280 53.608 130.917 -1.235 1.00 93.24 O
ATOM 24 OP2 G A 280 55.760 130.582 0.134 1.00 94.37 O
ATOM 25 O5' G A 280 53.943 128.859 0.146 1.00 94.00 O
TER
ATOM 1 O3' A B 348 53.805 114.161 4.802 1.00 98.43 O
ATOM 2 P C B 349 54.528 113.781 3.420 1.00101.30 P
ATOM 3 OP1 C B 349 54.517 112.298 3.337 1.00101.40 O
ATOM 4 OP2 C B 349 55.823 114.511 3.345 1.00101.34 O
ATOM 5 O5' C B 349 53.552 114.372 2.305 1.00101.30 O
ATOM 6 C5' C B 349 52.205 113.881 2.167 1.00102.98 C
ATOM 7 C4' C B 349 51.390 114.805 1.293 1.00104.95 C
ATOM 8 O4' C B 349 51.291 116.112 1.924 1.00105.32 O
ATOM 9 C3' C B 349 51.962 115.115 -0.082 1.00106.24 C
ATOM 10 O3' C B 349 51.714 114.081 -1.030 1.00108.11 O
ATOM 11 C2' C B 349 51.248 116.414 -0.432 1.00105.71 C
ATOM 12 O2' C B 349 49.908 116.209 -0.840 1.00105.13 O
ATOM 13 C1' C B 349 51.258 117.124 0.924 1.00105.00 C
ATOM 14 N1 C B 349 52.430 118.011 1.103 1.00104.05 N
ATOM 15 C2 C B 349 52.361 119.334 0.625 1.00103.73 C
ATOM 16 O2 C B 349 51.322 119.723 0.060 1.00102.56 O
ATOM 17 N3 C B 349 53.430 120.153 0.793 1.00103.22 N
ATOM 18 C4 C B 349 54.529 119.702 1.405 1.00103.01 C
ATOM 19 N4 C B 349 55.552 120.546 1.559 1.00102.39 N
ATOM 20 C5 C B 349 54.628 118.363 1.890 1.00103.48 C
ATOM 21 C6 C B 349 53.567 117.562 1.720 1.00103.84 C
ATOM 22 P G B 350 52.807 113.766 -2.169 1.00109.75 P
ATOM 23 OP1 G B 350 52.212 112.741 -3.061 1.00110.14 O
ATOM 24 OP2 G B 350 54.121 113.498 -1.519 1.00109.33 O
ATOM 25 O5' G B 350 52.919 115.131 -2.988 1.00110.30 O
TER
ATOM 2 P C A 279 60.381 129.464 -0.804 1.00 97.43 P
ATOM 3 OP1 C A 279 60.152 130.919 -0.991 1.00 97.14 O
ATOM 4 OP2 C A 279 60.806 128.953 0.524 1.00 97.37 O
ATOM 5 O5' C A 279 59.060 128.689 -1.247 1.00 97.19 O
ATOM 6 C5' C A 279 58.475 128.906 -2.549 1.00 96.64 C
ATOM 7 C4' C A 279 57.259 128.023 -2.745 1.00 96.23 C
ATOM 8 O4' C A 279 57.646 126.624 -2.726 1.00 96.08 O
ATOM 9 C3' C A 279 56.175 128.125 -1.684 1.00 95.43 C
ATOM 10 O3' C A 279 55.318 129.235 -1.925 1.00 94.46 O
ATOM 11 C2' C A 279 55.439 126.800 -1.843 1.00 95.52 C
ATOM 12 O2' C A 279 54.524 126.807 -2.922 1.00 94.98 O
ATOM 13 C1' C A 279 56.595 125.849 -2.167 1.00 95.66 C
ATOM 14 N1 C A 279 57.117 125.108 -1.000 1.00 95.73 N
ATOM 15 C2 C A 279 56.362 124.040 -0.477 1.00 95.76 C
ATOM 16 O2 C A 279 55.253 123.774 -0.977 1.00 95.56 O
ATOM 17 N3 C A 279 56.858 123.332 0.565 1.00 95.72 N
ATOM 18 C4 C A 279 58.042 123.658 1.092 1.00 96.21 C
ATOM 19 N4 C A 279 58.498 122.922 2.110 1.00 96.60 N
ATOM 20 C5 C A 279 58.814 124.751 0.597 1.00 95.96 C
ATOM 21 C6 C A 279 58.320 125.440 -0.438 1.00 95.59 C
ATOM 22 P G A 280 54.658 130.014 -0.688 1.00 94.02 P
ATOM 23 OP1 G A 280 53.608 130.917 -1.235 1.00 93.24 O
ATOM 24 OP2 G A 280 55.760 130.582 0.134 1.00 94.37 O
ATOM 25 O5' G A 280 53.943 128.859 0.146 1.00 94.00 O
TER
ATOM 1 O3' A B 348 53.805 114.161 4.802 1.00 98.43 O
ATOM 2 P C B 349 54.528 113.781 3.420 1.00101.30 P
ATOM 3 OP1 C B 349 54.517 112.298 3.337 1.00101.40 O
ATOM 4 OP2 C B 349 55.823 114.511 3.345 1.00101.34 O
ATOM 5 O5' C B 349 53.552 114.372 2.305 1.00101.30 O
ATOM 6 C5' C B 349 52.205 113.881 2.167 1.00102.98 C
ATOM 7 C4' C B 349 51.390 114.805 1.293 1.00104.95 C
ATOM 8 O4' C B 349 51.291 116.112 1.924 1.00105.32 O
ATOM 9 C3' C B 349 51.962 115.115 -0.082 1.00106.24 C
ATOM 10 O3' C B 349 51.714 114.081 -1.030 1.00108.11 O
ATOM 11 C2' C B 349 51.248 116.414 -0.432 1.00105.71 C
ATOM 12 O2' C B 349 49.908 116.209 -0.840 1.00105.13 O
ATOM 13 C1' C B 349 51.258 117.124 0.924 1.00105.00 C
ATOM 14 N1 C B 349 52.430 118.011 1.103 1.00104.05 N
ATOM 15 C2 C B 349 52.361 119.334 0.625 1.00103.73 C
ATOM 16 O2 C B 349 51.322 119.723 0.060 1.00102.56 O
ATOM 17 N3 C B 349 53.430 120.153 0.793 1.00103.22 N
ATOM 18 C4 C B 349 54.529 119.702 1.405 1.00103.01 C
ATOM 19 N4 C B 349 55.552 120.546 1.559 1.00102.39 N
ATOM 20 C5 C B 349 54.628 118.363 1.890 1.00103.48 C
ATOM 21 C6 C B 349 53.567 117.562 1.720 1.00103.84 C
ATOM 22 P G B 350 52.807 113.766 -2.169 1.00109.75 P
ATOM 23 OP1 G B 350 52.212 112.741 -3.061 1.00110.14 O
ATOM 24 OP2 G B 350 54.121 113.498 -1.519 1.00109.33 O
ATOM 25 O5' G B 350 52.919 115.131 -2.988 1.00110.30 O
TER
Atoms:
C2: (56.362,124.040,-0.477)
OP1: (60.152,130.919,-0.991)
OP2: (60.806,128.953,0.524)
C4: (58.042,123.658,1.092)
O5': (59.060,128.689,-1.247)
C3': (56.175,128.125,-1.684)
C1': (56.595,125.849,-2.167)
O4': (57.646,126.624,-2.726)
C5': (58.475,128.906,-2.549)
P: (60.381,129.464,-0.804)
O2: (55.253,123.774,-0.977)
C4': (57.259,128.023,-2.745)
C2': (55.439,126.800,-1.843)
O2': (54.524,126.807,-2.922)
N1: (57.117,125.108,-1.000)
N3: (56.858,123.332,0.565)
N4: (58.498,122.922,2.110)
C6: (58.320,125.440,-0.438)
C5: (58.814,124.751,0.597)
O3': (55.318,129.235,-1.925)
OP1: (60.152,130.919,-0.991)
OP2: (60.806,128.953,0.524)
C4: (58.042,123.658,1.092)
O5': (59.060,128.689,-1.247)
C3': (56.175,128.125,-1.684)
C1': (56.595,125.849,-2.167)
O4': (57.646,126.624,-2.726)
C5': (58.475,128.906,-2.549)
P: (60.381,129.464,-0.804)
O2: (55.253,123.774,-0.977)
C4': (57.259,128.023,-2.745)
C2': (55.439,126.800,-1.843)
O2': (54.524,126.807,-2.922)
N1: (57.117,125.108,-1.000)
N3: (56.858,123.332,0.565)
N4: (58.498,122.922,2.110)
C6: (58.320,125.440,-0.438)
C5: (58.814,124.751,0.597)
O3': (55.318,129.235,-1.925)
C2: (52.361,119.334,0.625)
OP1: (54.517,112.298,3.337)
OP2: (55.823,114.511,3.345)
C4: (54.529,119.702,1.405)
O5': (53.552,114.372,2.305)
C3': (51.962,115.115,-0.082)
C1': (51.258,117.124,0.924)
O4': (51.291,116.112,1.924)
C5': (52.205,113.881,2.167)
P: (54.528,113.781,3.420)
O2: (51.322,119.723,0.060)
C4': (51.390,114.805,1.293)
C2': (51.248,116.414,-0.432)
O2': (49.908,116.209,-0.840)
N1: (52.430,118.011,1.103)
N3: (53.430,120.153,0.793)
N4: (55.552,120.546,1.559)
C6: (53.567,117.562,1.720)
C5: (54.628,118.363,1.890)
O3': (51.714,114.081,-1.030)
OP1: (54.517,112.298,3.337)
OP2: (55.823,114.511,3.345)
C4: (54.529,119.702,1.405)
O5': (53.552,114.372,2.305)
C3': (51.962,115.115,-0.082)
C1': (51.258,117.124,0.924)
O4': (51.291,116.112,1.924)
C5': (52.205,113.881,2.167)
P: (54.528,113.781,3.420)
O2: (51.322,119.723,0.060)
C4': (51.390,114.805,1.293)
C2': (51.248,116.414,-0.432)
O2': (49.908,116.209,-0.840)
N1: (52.430,118.011,1.103)
N3: (53.430,120.153,0.793)
N4: (55.552,120.546,1.559)
C6: (53.567,117.562,1.720)
C5: (54.628,118.363,1.890)
O3': (51.714,114.081,-1.030)
Image (generated by PyMOL):