Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OIU:Q61:P4
Extra
PDB:
ATOM 1 O3' A A 60 -20.360 1.685 -8.066 1.00 71.84 O
ATOM 2 P A A 61 -19.988 2.034 -9.595 1.00 73.10 P
ATOM 3 OP1 A A 61 -19.808 3.499 -9.689 1.00 71.59 O
ATOM 4 OP2 A A 61 -20.924 1.306 -10.488 1.00 73.22 O
ATOM 5 O5' A A 61 -18.548 1.346 -9.771 1.00 74.43 O
ATOM 6 C5' A A 61 -17.433 1.897 -9.059 1.00 75.55 C
ATOM 7 C4' A A 61 -16.278 0.927 -9.034 1.00 75.54 C
ATOM 8 O4' A A 61 -16.817 -0.277 -8.484 1.00 76.34 O
ATOM 9 C3' A A 61 -15.751 0.496 -10.390 1.00 76.45 C
ATOM 10 O3' A A 61 -14.684 1.319 -10.863 1.00 76.65 O
ATOM 11 C2' A A 61 -15.262 -0.927 -10.148 1.00 77.03 C
ATOM 12 O2' A A 61 -13.980 -0.986 -9.544 1.00 77.42 O
ATOM 13 C1' A A 61 -16.282 -1.412 -9.146 1.00 77.30 C
ATOM 14 N9 A A 61 -17.401 -2.232 -9.603 1.00 77.25 N
ATOM 15 C8 A A 61 -18.644 -1.776 -9.909 1.00 77.41 C
ATOM 16 N7 A A 61 -19.478 -2.728 -10.234 1.00 78.13 N
ATOM 17 C5 A A 61 -18.740 -3.887 -10.126 1.00 77.35 C
ATOM 18 C6 A A 61 -19.073 -5.239 -10.339 1.00 77.14 C
ATOM 19 N6 A A 61 -20.288 -5.647 -10.725 1.00 76.70 N
ATOM 20 N1 A A 61 -18.100 -6.152 -10.152 1.00 77.16 N
ATOM 21 C2 A A 61 -16.888 -5.727 -9.769 1.00 77.54 C
ATOM 22 N3 A A 61 -16.465 -4.484 -9.528 1.00 76.94 N
ATOM 23 C4 A A 61 -17.451 -3.600 -9.727 1.00 77.07 C
ATOM 24 P A A 62 -14.391 1.414 -12.443 1.00 78.23 P
ATOM 25 OP1 A A 62 -13.148 2.204 -12.542 1.00 78.88 O
ATOM 26 OP2 A A 62 -15.629 1.859 -13.139 1.00 77.49 O
ATOM 27 O5' A A 62 -14.042 -0.064 -12.933 1.00 75.78 O
TER
ATOM 1 O3' C B 3 -7.362 -3.745 -11.590 1.00 73.76 O
ATOM 2 P C B 4 -7.284 -3.630 -9.999 1.00 74.61 P
ATOM 3 OP1 C B 4 -6.642 -2.337 -9.635 1.00 74.11 O
ATOM 4 OP2 C B 4 -6.687 -4.881 -9.482 1.00 75.24 O
ATOM 5 O5' C B 4 -8.827 -3.633 -9.603 1.00 71.60 O
ATOM 6 C5' C B 4 -9.693 -2.644 -10.072 1.00 71.29 C
ATOM 7 C4' C B 4 -11.116 -3.092 -9.802 1.00 73.03 C
ATOM 8 O4' C B 4 -11.385 -4.369 -10.448 1.00 72.70 O
ATOM 9 C3' C B 4 -11.453 -3.350 -8.336 1.00 72.44 C
ATOM 10 O3' C B 4 -11.722 -2.144 -7.664 1.00 71.92 O
ATOM 11 C2' C B 4 -12.684 -4.224 -8.462 1.00 72.15 C
ATOM 12 O2' C B 4 -13.812 -3.511 -8.903 1.00 73.78 O
ATOM 13 C1' C B 4 -12.304 -5.092 -9.642 1.00 72.51 C
ATOM 14 N1 C B 4 -11.779 -6.401 -9.201 1.00 72.49 N
ATOM 15 C2 C B 4 -12.696 -7.358 -8.750 1.00 72.61 C
ATOM 16 O2 C B 4 -13.893 -7.078 -8.728 1.00 72.93 O
ATOM 17 N3 C B 4 -12.255 -8.568 -8.348 1.00 72.53 N
ATOM 18 C4 C B 4 -10.953 -8.810 -8.376 1.00 72.27 C
ATOM 19 N4 C B 4 -10.560 -10.000 -7.970 1.00 73.10 N
ATOM 20 C5 C B 4 -9.996 -7.864 -8.827 1.00 72.53 C
ATOM 21 C6 C B 4 -10.447 -6.673 -9.229 1.00 72.13 C
ATOM 22 P U B 5 -11.140 -2.037 -6.185 1.00 72.85 P
ATOM 23 OP1 U B 5 -11.165 -0.647 -5.688 1.00 72.24 O
ATOM 24 OP2 U B 5 -9.884 -2.792 -6.091 1.00 72.72 O
ATOM 25 O5' U B 5 -12.241 -2.934 -5.447 1.00 73.84 O
TER
ATOM 2 P A A 61 -19.988 2.034 -9.595 1.00 73.10 P
ATOM 3 OP1 A A 61 -19.808 3.499 -9.689 1.00 71.59 O
ATOM 4 OP2 A A 61 -20.924 1.306 -10.488 1.00 73.22 O
ATOM 5 O5' A A 61 -18.548 1.346 -9.771 1.00 74.43 O
ATOM 6 C5' A A 61 -17.433 1.897 -9.059 1.00 75.55 C
ATOM 7 C4' A A 61 -16.278 0.927 -9.034 1.00 75.54 C
ATOM 8 O4' A A 61 -16.817 -0.277 -8.484 1.00 76.34 O
ATOM 9 C3' A A 61 -15.751 0.496 -10.390 1.00 76.45 C
ATOM 10 O3' A A 61 -14.684 1.319 -10.863 1.00 76.65 O
ATOM 11 C2' A A 61 -15.262 -0.927 -10.148 1.00 77.03 C
ATOM 12 O2' A A 61 -13.980 -0.986 -9.544 1.00 77.42 O
ATOM 13 C1' A A 61 -16.282 -1.412 -9.146 1.00 77.30 C
ATOM 14 N9 A A 61 -17.401 -2.232 -9.603 1.00 77.25 N
ATOM 15 C8 A A 61 -18.644 -1.776 -9.909 1.00 77.41 C
ATOM 16 N7 A A 61 -19.478 -2.728 -10.234 1.00 78.13 N
ATOM 17 C5 A A 61 -18.740 -3.887 -10.126 1.00 77.35 C
ATOM 18 C6 A A 61 -19.073 -5.239 -10.339 1.00 77.14 C
ATOM 19 N6 A A 61 -20.288 -5.647 -10.725 1.00 76.70 N
ATOM 20 N1 A A 61 -18.100 -6.152 -10.152 1.00 77.16 N
ATOM 21 C2 A A 61 -16.888 -5.727 -9.769 1.00 77.54 C
ATOM 22 N3 A A 61 -16.465 -4.484 -9.528 1.00 76.94 N
ATOM 23 C4 A A 61 -17.451 -3.600 -9.727 1.00 77.07 C
ATOM 24 P A A 62 -14.391 1.414 -12.443 1.00 78.23 P
ATOM 25 OP1 A A 62 -13.148 2.204 -12.542 1.00 78.88 O
ATOM 26 OP2 A A 62 -15.629 1.859 -13.139 1.00 77.49 O
ATOM 27 O5' A A 62 -14.042 -0.064 -12.933 1.00 75.78 O
TER
ATOM 1 O3' C B 3 -7.362 -3.745 -11.590 1.00 73.76 O
ATOM 2 P C B 4 -7.284 -3.630 -9.999 1.00 74.61 P
ATOM 3 OP1 C B 4 -6.642 -2.337 -9.635 1.00 74.11 O
ATOM 4 OP2 C B 4 -6.687 -4.881 -9.482 1.00 75.24 O
ATOM 5 O5' C B 4 -8.827 -3.633 -9.603 1.00 71.60 O
ATOM 6 C5' C B 4 -9.693 -2.644 -10.072 1.00 71.29 C
ATOM 7 C4' C B 4 -11.116 -3.092 -9.802 1.00 73.03 C
ATOM 8 O4' C B 4 -11.385 -4.369 -10.448 1.00 72.70 O
ATOM 9 C3' C B 4 -11.453 -3.350 -8.336 1.00 72.44 C
ATOM 10 O3' C B 4 -11.722 -2.144 -7.664 1.00 71.92 O
ATOM 11 C2' C B 4 -12.684 -4.224 -8.462 1.00 72.15 C
ATOM 12 O2' C B 4 -13.812 -3.511 -8.903 1.00 73.78 O
ATOM 13 C1' C B 4 -12.304 -5.092 -9.642 1.00 72.51 C
ATOM 14 N1 C B 4 -11.779 -6.401 -9.201 1.00 72.49 N
ATOM 15 C2 C B 4 -12.696 -7.358 -8.750 1.00 72.61 C
ATOM 16 O2 C B 4 -13.893 -7.078 -8.728 1.00 72.93 O
ATOM 17 N3 C B 4 -12.255 -8.568 -8.348 1.00 72.53 N
ATOM 18 C4 C B 4 -10.953 -8.810 -8.376 1.00 72.27 C
ATOM 19 N4 C B 4 -10.560 -10.000 -7.970 1.00 73.10 N
ATOM 20 C5 C B 4 -9.996 -7.864 -8.827 1.00 72.53 C
ATOM 21 C6 C B 4 -10.447 -6.673 -9.229 1.00 72.13 C
ATOM 22 P U B 5 -11.140 -2.037 -6.185 1.00 72.85 P
ATOM 23 OP1 U B 5 -11.165 -0.647 -5.688 1.00 72.24 O
ATOM 24 OP2 U B 5 -9.884 -2.792 -6.091 1.00 72.72 O
ATOM 25 O5' U B 5 -12.241 -2.934 -5.447 1.00 73.84 O
TER
Atoms:
OP1: (-19.808,3.499,-9.689)
OP2: (-20.924,1.306,-10.488)
C3': (-15.751,0.496,-10.390)
C1': (-16.282,-1.412,-9.146)
C5': (-17.433,1.897,-9.059)
O4': (-16.817,-0.277,-8.484)
C8: (-18.644,-1.776,-9.909)
O2': (-13.980,-0.986,-9.544)
C6: (-19.073,-5.239,-10.339)
C5: (-18.740,-3.887,-10.126)
C4: (-17.451,-3.600,-9.727)
P: (-19.988,2.034,-9.595)
C4': (-16.278,0.927,-9.034)
C2': (-15.262,-0.927,-10.148)
C2: (-16.888,-5.727,-9.769)
N1: (-18.100,-6.152,-10.152)
N3: (-16.465,-4.484,-9.528)
N6: (-20.288,-5.647,-10.725)
N7: (-19.478,-2.728,-10.234)
N9: (-17.401,-2.232,-9.603)
O5': (-18.548,1.346,-9.771)
O3': (-14.684,1.319,-10.863)
OP2: (-20.924,1.306,-10.488)
C3': (-15.751,0.496,-10.390)
C1': (-16.282,-1.412,-9.146)
C5': (-17.433,1.897,-9.059)
O4': (-16.817,-0.277,-8.484)
C8: (-18.644,-1.776,-9.909)
O2': (-13.980,-0.986,-9.544)
C6: (-19.073,-5.239,-10.339)
C5: (-18.740,-3.887,-10.126)
C4: (-17.451,-3.600,-9.727)
P: (-19.988,2.034,-9.595)
C4': (-16.278,0.927,-9.034)
C2': (-15.262,-0.927,-10.148)
C2: (-16.888,-5.727,-9.769)
N1: (-18.100,-6.152,-10.152)
N3: (-16.465,-4.484,-9.528)
N6: (-20.288,-5.647,-10.725)
N7: (-19.478,-2.728,-10.234)
N9: (-17.401,-2.232,-9.603)
O5': (-18.548,1.346,-9.771)
O3': (-14.684,1.319,-10.863)
C2: (-12.696,-7.358,-8.750)
OP1: (-6.642,-2.337,-9.635)
OP2: (-6.687,-4.881,-9.482)
C4: (-10.953,-8.810,-8.376)
O5': (-8.827,-3.633,-9.603)
C3': (-11.453,-3.350,-8.336)
C1': (-12.304,-5.092,-9.642)
O4': (-11.385,-4.369,-10.448)
C5': (-9.693,-2.644,-10.072)
P: (-7.284,-3.630,-9.999)
O2: (-13.893,-7.078,-8.728)
C4': (-11.116,-3.092,-9.802)
C2': (-12.684,-4.224,-8.462)
O2': (-13.812,-3.511,-8.903)
N1: (-11.779,-6.401,-9.201)
N3: (-12.255,-8.568,-8.348)
N4: (-10.560,-10.000,-7.970)
C6: (-10.447,-6.673,-9.229)
C5: (-9.996,-7.864,-8.827)
O3': (-11.722,-2.144,-7.664)
OP1: (-6.642,-2.337,-9.635)
OP2: (-6.687,-4.881,-9.482)
C4: (-10.953,-8.810,-8.376)
O5': (-8.827,-3.633,-9.603)
C3': (-11.453,-3.350,-8.336)
C1': (-12.304,-5.092,-9.642)
O4': (-11.385,-4.369,-10.448)
C5': (-9.693,-2.644,-10.072)
P: (-7.284,-3.630,-9.999)
O2: (-13.893,-7.078,-8.728)
C4': (-11.116,-3.092,-9.802)
C2': (-12.684,-4.224,-8.462)
O2': (-13.812,-3.511,-8.903)
N1: (-11.779,-6.401,-9.201)
N3: (-12.255,-8.568,-8.348)
N4: (-10.560,-10.000,-7.970)
C6: (-10.447,-6.673,-9.229)
C5: (-9.996,-7.864,-8.827)
O3': (-11.722,-2.144,-7.664)
Image (generated by PyMOL):