ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:01040:01028

Extra

PDB:
ATOM 1 O3' C A1039 37.089 106.237 103.341 1.00 56.59 O
ATOM 2 P A A1040 37.742 106.957 102.067 1.00 57.53 P
ATOM 3 OP1 A A1040 39.004 107.620 102.482 1.00 57.28 O
ATOM 4 OP2 A A1040 36.682 107.744 101.390 1.00 57.31 O
ATOM 5 O5' A A1040 38.143 105.719 101.149 1.00 51.23 O
ATOM 6 C5' A A1040 38.416 104.434 101.736 1.00 41.26 C
ATOM 7 C4' A A1040 38.424 103.376 100.674 1.00 38.37 C
ATOM 8 O4' A A1040 39.489 103.651 99.739 1.00 35.80 O
ATOM 9 C3' A A1040 38.705 101.970 101.154 1.00 39.08 C
ATOM 10 O3' A A1040 37.491 101.374 101.607 1.00 42.24 O
ATOM 11 C2' A A1040 39.203 101.296 99.881 1.00 39.28 C
ATOM 12 O2' A A1040 38.151 100.903 99.024 1.00 42.42 O
ATOM 13 C1' A A1040 39.973 102.437 99.208 1.00 36.72 C
ATOM 14 N9 A A1040 41.426 102.406 99.379 1.00 35.24 N
ATOM 15 C8 A A1040 42.167 102.987 100.378 1.00 34.00 C
ATOM 16 N7 A A1040 43.455 102.820 100.242 1.00 34.28 N
ATOM 17 C5 A A1040 43.574 102.070 99.083 1.00 34.23 C
ATOM 18 C6 A A1040 44.688 101.553 98.404 1.00 34.89 C
ATOM 19 N6 A A1040 45.943 101.735 98.808 1.00 31.82 N
ATOM 20 N1 A A1040 44.463 100.829 97.281 1.00 36.15 N
ATOM 21 C2 A A1040 43.202 100.649 96.881 1.00 32.62 C
ATOM 22 N3 A A1040 42.075 101.090 97.435 1.00 33.28 N
ATOM 23 C4 A A1040 42.333 101.800 98.545 1.00 33.34 C
ATOM 24 P A A1041 37.260 101.073 103.174 1.00 39.64 P
ATOM 25 OP1 A A1041 35.819 101.350 103.417 1.00 40.46 O
ATOM 26 OP2 A A1041 38.284 101.762 103.999 1.00 40.88 O
ATOM 27 O5' A A1041 37.499 99.504 103.278 1.00 39.43 O
TER

ATOM 1 O3' C B1027 35.086 94.479 97.429 1.00 36.60 O
ATOM 2 P C B1028 34.984 95.480 96.188 1.00 37.16 P
ATOM 3 OP1 C B1028 33.751 96.294 96.327 1.00 35.33 O
ATOM 4 OP2 C B1028 35.196 94.664 94.967 1.00 33.63 O
ATOM 5 O5' C B1028 36.228 96.449 96.382 1.00 36.36 O
ATOM 6 C5' C B1028 36.217 97.462 97.393 1.00 36.80 C
ATOM 7 C4' C B1028 37.466 98.303 97.294 1.00 37.38 C
ATOM 8 O4' C B1028 38.629 97.489 97.604 1.00 37.24 O
ATOM 9 C3' C B1028 37.769 98.851 95.908 1.00 35.31 C
ATOM 10 O3' C B1028 37.054 100.041 95.637 1.00 34.58 O
ATOM 11 C2' C B1028 39.255 99.123 95.995 1.00 34.45 C
ATOM 12 O2' C B1028 39.473 100.301 96.733 1.00 34.57 O
ATOM 13 C1' C B1028 39.726 97.916 96.806 1.00 35.27 C
ATOM 14 N1 C B1028 40.160 96.784 95.968 1.00 33.44 N
ATOM 15 C2 C B1028 41.471 96.767 95.499 1.00 33.36 C
ATOM 16 O2 C B1028 42.202 97.740 95.742 1.00 35.07 O
ATOM 17 N3 C B1028 41.905 95.696 94.785 1.00 33.11 N
ATOM 18 C4 C B1028 41.062 94.691 94.509 1.00 31.77 C
ATOM 19 N4 C B1028 41.518 93.658 93.802 1.00 25.49 N
ATOM 20 C5 C B1028 39.713 94.704 94.947 1.00 29.42 C
ATOM 21 C6 C B1028 39.307 95.757 95.668 1.00 31.28 C
ATOM 22 P A B1029 36.774 100.464 94.116 1.00 34.82 P
ATOM 23 OP1 A B1029 36.305 101.868 94.170 1.00 30.13 O
ATOM 24 OP2 A B1029 35.916 99.435 93.495 1.00 34.79 O
ATOM 25 O5' A B1029 38.214 100.395 93.422 1.00 35.99 O
TER

Atoms:
OP1: (39.004,107.620,102.482)
OP2: (36.682,107.744,101.390)
C3': (38.705,101.970,101.154)
C1': (39.973,102.437,99.208)
C5': (38.416,104.434,101.736)
O4': (39.489,103.651,99.739)
C8: (42.167,102.987,100.378)
O2': (38.151,100.903,99.024)
C6: (44.688,101.553,98.404)
C5: (43.574,102.070,99.083)
C4: (42.333,101.800,98.545)
P: (37.742,106.957,102.067)
C4': (38.424,103.376,100.674)
C2': (39.203,101.296,99.881)
C2: (43.202,100.649,96.881)
N1: (44.463,100.829,97.281)
N3: (42.075,101.090,97.435)
N6: (45.943,101.735,98.808)
N7: (43.455,102.820,100.242)
N9: (41.426,102.406,99.379)
O5': (38.143,105.719,101.149)
O3': (37.491,101.374,101.607)
C2: (41.471,96.767,95.499)
OP1: (33.751,96.294,96.327)
OP2: (35.196,94.664,94.967)
C4: (41.062,94.691,94.509)
O5': (36.228,96.449,96.382)
C3': (37.769,98.851,95.908)
C1': (39.726,97.916,96.806)
O4': (38.629,97.489,97.604)
C5': (36.217,97.462,97.393)
P: (34.984,95.480,96.188)
O2: (42.202,97.740,95.742)
C4': (37.466,98.303,97.294)
C2': (39.255,99.123,95.995)
O2': (39.473,100.301,96.733)
N1: (40.160,96.784,95.968)
N3: (41.905,95.696,94.785)
N4: (41.518,93.658,93.802)
C6: (39.307,95.757,95.668)
C5: (39.713,94.704,94.947)
O3': (37.054,100.041,95.637)
Image (generated by PyMOL):
PyMOL image
show in jmol