Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A57:A13
Extra
PDB:
ATOM 1 O3' A A 56 9.798 27.715 -27.983 1.00 40.01 O
ATOM 2 P A A 57 9.935 26.839 -26.655 1.00 41.79 P
ATOM 3 OP1 A A 57 10.774 27.586 -25.690 1.00 32.28 O
ATOM 4 OP2 A A 57 10.297 25.462 -27.055 1.00 37.35 O
ATOM 5 O5' A A 57 8.438 26.830 -26.095 1.00 40.81 O
ATOM 6 C5' A A 57 7.847 28.023 -25.599 1.00 36.63 C
ATOM 7 C4' A A 57 6.370 27.785 -25.365 1.00 33.36 C
ATOM 8 O4' A A 57 5.723 27.541 -26.637 1.00 34.13 O
ATOM 9 C3' A A 57 6.061 26.542 -24.548 1.00 33.21 C
ATOM 10 O3' A A 57 6.110 26.859 -23.169 1.00 30.50 O
ATOM 11 C2' A A 57 4.637 26.228 -24.988 1.00 28.10 C
ATOM 12 O2' A A 57 3.693 27.026 -24.305 1.00 31.64 O
ATOM 13 C1' A A 57 4.666 26.614 -26.464 1.00 32.03 C
ATOM 14 N9 A A 57 4.873 25.487 -27.367 1.00 34.33 N
ATOM 15 C8 A A 57 6.064 24.986 -27.812 1.00 33.08 C
ATOM 16 N7 A A 57 5.935 23.963 -28.621 1.00 36.12 N
ATOM 17 C5 A A 57 4.566 23.781 -28.716 1.00 33.90 C
ATOM 18 C6 A A 57 3.776 22.855 -29.423 1.00 34.64 C
ATOM 19 N6 A A 57 4.281 21.895 -30.206 1.00 33.42 N
ATOM 20 N1 A A 57 2.436 22.955 -29.294 1.00 31.48 N
ATOM 21 C2 A A 57 1.930 23.913 -28.511 1.00 31.72 C
ATOM 22 N3 A A 57 2.572 24.838 -27.799 1.00 32.61 N
ATOM 23 C4 A A 57 3.898 24.713 -27.947 1.00 31.28 C
ATOM 24 P U A 58 6.527 25.744 -22.099 1.00 33.04 P
ATOM 25 OP1 U A 58 6.759 26.441 -20.813 1.00 31.48 O
ATOM 26 OP2 U A 58 7.593 24.903 -22.688 1.00 33.47 O
ATOM 27 O5' U A 58 5.200 24.858 -21.974 1.00 32.57 O
TER
ATOM 1 O3' G B 12 -3.645 26.097 -20.827 1.00 25.65 O
ATOM 2 P C B 13 -3.339 27.588 -21.296 1.00 30.58 P
ATOM 3 OP1 C B 13 -2.737 28.315 -20.158 1.00 34.27 O
ATOM 4 OP2 C B 13 -4.549 28.108 -21.972 1.00 29.17 O
ATOM 5 O5' C B 13 -2.214 27.357 -22.408 1.00 30.92 O
ATOM 6 C5' C B 13 -1.039 26.624 -22.089 1.00 28.86 C
ATOM 7 C4' C B 13 -0.276 26.266 -23.350 1.00 24.85 C
ATOM 8 O4' C B 13 -0.968 25.207 -24.058 1.00 27.01 O
ATOM 9 C3' C B 13 -0.160 27.380 -24.381 1.00 27.55 C
ATOM 10 O3' C B 13 0.889 28.277 -24.040 1.00 27.23 O
ATOM 11 C2' C B 13 0.199 26.555 -25.606 1.00 29.32 C
ATOM 12 O2' C B 13 1.541 26.117 -25.548 1.00 27.47 O
ATOM 13 C1' C B 13 -0.756 25.373 -25.448 1.00 29.08 C
ATOM 14 N1 C B 13 -2.063 25.608 -26.124 1.00 28.97 N
ATOM 15 C2 C B 13 -2.149 25.434 -27.509 1.00 30.61 C
ATOM 16 O2 C B 13 -1.139 25.085 -28.127 1.00 26.98 O
ATOM 17 N3 C B 13 -3.331 25.651 -28.133 1.00 29.67 N
ATOM 18 C4 C B 13 -4.395 26.033 -27.426 1.00 31.00 C
ATOM 19 N4 C B 13 -5.540 26.235 -28.087 1.00 27.55 N
ATOM 20 C5 C B 13 -4.329 26.218 -26.012 1.00 30.89 C
ATOM 21 C6 C B 13 -3.156 25.998 -25.407 1.00 29.02 C
ATOM 22 P U B 14 0.717 29.851 -24.269 1.00 31.48 P
ATOM 23 OP1 U B 14 1.913 30.511 -23.706 1.00 35.04 O
ATOM 24 OP2 U B 14 -0.632 30.249 -23.815 1.00 31.94 O
ATOM 25 O5' U B 14 0.786 30.004 -25.859 1.00 34.14 O
TER
ATOM 2 P A A 57 9.935 26.839 -26.655 1.00 41.79 P
ATOM 3 OP1 A A 57 10.774 27.586 -25.690 1.00 32.28 O
ATOM 4 OP2 A A 57 10.297 25.462 -27.055 1.00 37.35 O
ATOM 5 O5' A A 57 8.438 26.830 -26.095 1.00 40.81 O
ATOM 6 C5' A A 57 7.847 28.023 -25.599 1.00 36.63 C
ATOM 7 C4' A A 57 6.370 27.785 -25.365 1.00 33.36 C
ATOM 8 O4' A A 57 5.723 27.541 -26.637 1.00 34.13 O
ATOM 9 C3' A A 57 6.061 26.542 -24.548 1.00 33.21 C
ATOM 10 O3' A A 57 6.110 26.859 -23.169 1.00 30.50 O
ATOM 11 C2' A A 57 4.637 26.228 -24.988 1.00 28.10 C
ATOM 12 O2' A A 57 3.693 27.026 -24.305 1.00 31.64 O
ATOM 13 C1' A A 57 4.666 26.614 -26.464 1.00 32.03 C
ATOM 14 N9 A A 57 4.873 25.487 -27.367 1.00 34.33 N
ATOM 15 C8 A A 57 6.064 24.986 -27.812 1.00 33.08 C
ATOM 16 N7 A A 57 5.935 23.963 -28.621 1.00 36.12 N
ATOM 17 C5 A A 57 4.566 23.781 -28.716 1.00 33.90 C
ATOM 18 C6 A A 57 3.776 22.855 -29.423 1.00 34.64 C
ATOM 19 N6 A A 57 4.281 21.895 -30.206 1.00 33.42 N
ATOM 20 N1 A A 57 2.436 22.955 -29.294 1.00 31.48 N
ATOM 21 C2 A A 57 1.930 23.913 -28.511 1.00 31.72 C
ATOM 22 N3 A A 57 2.572 24.838 -27.799 1.00 32.61 N
ATOM 23 C4 A A 57 3.898 24.713 -27.947 1.00 31.28 C
ATOM 24 P U A 58 6.527 25.744 -22.099 1.00 33.04 P
ATOM 25 OP1 U A 58 6.759 26.441 -20.813 1.00 31.48 O
ATOM 26 OP2 U A 58 7.593 24.903 -22.688 1.00 33.47 O
ATOM 27 O5' U A 58 5.200 24.858 -21.974 1.00 32.57 O
TER
ATOM 1 O3' G B 12 -3.645 26.097 -20.827 1.00 25.65 O
ATOM 2 P C B 13 -3.339 27.588 -21.296 1.00 30.58 P
ATOM 3 OP1 C B 13 -2.737 28.315 -20.158 1.00 34.27 O
ATOM 4 OP2 C B 13 -4.549 28.108 -21.972 1.00 29.17 O
ATOM 5 O5' C B 13 -2.214 27.357 -22.408 1.00 30.92 O
ATOM 6 C5' C B 13 -1.039 26.624 -22.089 1.00 28.86 C
ATOM 7 C4' C B 13 -0.276 26.266 -23.350 1.00 24.85 C
ATOM 8 O4' C B 13 -0.968 25.207 -24.058 1.00 27.01 O
ATOM 9 C3' C B 13 -0.160 27.380 -24.381 1.00 27.55 C
ATOM 10 O3' C B 13 0.889 28.277 -24.040 1.00 27.23 O
ATOM 11 C2' C B 13 0.199 26.555 -25.606 1.00 29.32 C
ATOM 12 O2' C B 13 1.541 26.117 -25.548 1.00 27.47 O
ATOM 13 C1' C B 13 -0.756 25.373 -25.448 1.00 29.08 C
ATOM 14 N1 C B 13 -2.063 25.608 -26.124 1.00 28.97 N
ATOM 15 C2 C B 13 -2.149 25.434 -27.509 1.00 30.61 C
ATOM 16 O2 C B 13 -1.139 25.085 -28.127 1.00 26.98 O
ATOM 17 N3 C B 13 -3.331 25.651 -28.133 1.00 29.67 N
ATOM 18 C4 C B 13 -4.395 26.033 -27.426 1.00 31.00 C
ATOM 19 N4 C B 13 -5.540 26.235 -28.087 1.00 27.55 N
ATOM 20 C5 C B 13 -4.329 26.218 -26.012 1.00 30.89 C
ATOM 21 C6 C B 13 -3.156 25.998 -25.407 1.00 29.02 C
ATOM 22 P U B 14 0.717 29.851 -24.269 1.00 31.48 P
ATOM 23 OP1 U B 14 1.913 30.511 -23.706 1.00 35.04 O
ATOM 24 OP2 U B 14 -0.632 30.249 -23.815 1.00 31.94 O
ATOM 25 O5' U B 14 0.786 30.004 -25.859 1.00 34.14 O
TER
Atoms:
OP1: (10.774,27.586,-25.690)
OP2: (10.297,25.462,-27.055)
C3': (6.061,26.542,-24.548)
C1': (4.666,26.614,-26.464)
C5': (7.847,28.023,-25.599)
O4': (5.723,27.541,-26.637)
C8: (6.064,24.986,-27.812)
O2': (3.693,27.026,-24.305)
C6: (3.776,22.855,-29.423)
C5: (4.566,23.781,-28.716)
C4: (3.898,24.713,-27.947)
P: (9.935,26.839,-26.655)
C4': (6.370,27.785,-25.365)
C2': (4.637,26.228,-24.988)
C2: (1.930,23.913,-28.511)
N1: (2.436,22.955,-29.294)
N3: (2.572,24.838,-27.799)
N6: (4.281,21.895,-30.206)
N7: (5.935,23.963,-28.621)
N9: (4.873,25.487,-27.367)
O5': (8.438,26.830,-26.095)
O3': (6.110,26.859,-23.169)
OP2: (10.297,25.462,-27.055)
C3': (6.061,26.542,-24.548)
C1': (4.666,26.614,-26.464)
C5': (7.847,28.023,-25.599)
O4': (5.723,27.541,-26.637)
C8: (6.064,24.986,-27.812)
O2': (3.693,27.026,-24.305)
C6: (3.776,22.855,-29.423)
C5: (4.566,23.781,-28.716)
C4: (3.898,24.713,-27.947)
P: (9.935,26.839,-26.655)
C4': (6.370,27.785,-25.365)
C2': (4.637,26.228,-24.988)
C2: (1.930,23.913,-28.511)
N1: (2.436,22.955,-29.294)
N3: (2.572,24.838,-27.799)
N6: (4.281,21.895,-30.206)
N7: (5.935,23.963,-28.621)
N9: (4.873,25.487,-27.367)
O5': (8.438,26.830,-26.095)
O3': (6.110,26.859,-23.169)
C2: (-2.149,25.434,-27.509)
OP1: (-2.737,28.315,-20.158)
OP2: (-4.549,28.108,-21.972)
C4: (-4.395,26.033,-27.426)
O5': (-2.214,27.357,-22.408)
C3': (-0.160,27.380,-24.381)
C1': (-0.756,25.373,-25.448)
O4': (-0.968,25.207,-24.058)
C5': (-1.039,26.624,-22.089)
P: (-3.339,27.588,-21.296)
O2: (-1.139,25.085,-28.127)
C4': (-0.276,26.266,-23.350)
C2': (0.199,26.555,-25.606)
O2': (1.541,26.117,-25.548)
N1: (-2.063,25.608,-26.124)
N3: (-3.331,25.651,-28.133)
N4: (-5.540,26.235,-28.087)
C6: (-3.156,25.998,-25.407)
C5: (-4.329,26.218,-26.012)
O3': (0.889,28.277,-24.040)
OP1: (-2.737,28.315,-20.158)
OP2: (-4.549,28.108,-21.972)
C4: (-4.395,26.033,-27.426)
O5': (-2.214,27.357,-22.408)
C3': (-0.160,27.380,-24.381)
C1': (-0.756,25.373,-25.448)
O4': (-0.968,25.207,-24.058)
C5': (-1.039,26.624,-22.089)
P: (-3.339,27.588,-21.296)
O2: (-1.139,25.085,-28.127)
C4': (-0.276,26.266,-23.350)
C2': (0.199,26.555,-25.606)
O2': (1.541,26.117,-25.548)
N1: (-2.063,25.608,-26.124)
N3: (-3.331,25.651,-28.133)
N4: (-5.540,26.235,-28.087)
C6: (-3.156,25.998,-25.407)
C5: (-4.329,26.218,-26.012)
O3': (0.889,28.277,-24.040)
Image (generated by PyMOL):