ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01816:01812

Extra

PDB:
ATOM 1 O3' A A1815 115.320 123.472 51.867 1.00 51.56 O
ATOM 2 P A A1816 114.406 123.868 53.117 1.00 50.50 P
ATOM 3 OP1 A A1816 113.301 122.877 53.172 1.00 52.33 O
ATOM 4 OP2 A A1816 114.086 125.318 53.003 1.00 51.02 O
ATOM 5 O5' A A1816 115.349 123.653 54.384 1.00 47.07 O
ATOM 6 C5' A A1816 116.124 122.450 54.545 1.00 42.06 C
ATOM 7 C4' A A1816 116.606 122.325 55.972 1.00 38.53 C
ATOM 8 O4' A A1816 117.283 123.556 56.342 1.00 37.31 O
ATOM 9 C3' A A1816 115.519 122.194 57.025 1.00 38.62 C
ATOM 10 O3' A A1816 115.047 120.858 57.143 1.00 38.54 O
ATOM 11 C2' A A1816 116.229 122.681 58.281 1.00 37.97 C
ATOM 12 O2' A A1816 117.095 121.715 58.852 1.00 37.79 O
ATOM 13 C1' A A1816 117.058 123.835 57.717 1.00 36.65 C
ATOM 14 N9 A A1816 116.378 125.127 57.829 1.00 33.76 N
ATOM 15 C8 A A1816 115.767 125.858 56.837 1.00 33.35 C
ATOM 16 N7 A A1816 115.227 126.976 57.261 1.00 33.58 N
ATOM 17 C5 A A1816 115.504 126.984 58.623 1.00 32.65 C
ATOM 18 C6 A A1816 115.194 127.900 59.647 1.00 34.20 C
ATOM 19 N6 A A1816 114.525 129.041 59.447 1.00 36.22 N
ATOM 20 N1 A A1816 115.603 127.602 60.901 1.00 34.84 N
ATOM 21 C2 A A1816 116.289 126.468 61.097 1.00 34.43 C
ATOM 22 N3 A A1816 116.649 125.536 60.215 1.00 32.33 N
ATOM 23 C4 A A1816 116.216 125.855 58.984 1.00 32.40 C
ATOM 24 P A A1817 113.548 120.582 57.666 1.00 38.24 P
ATOM 25 OP1 A A1817 113.369 119.115 57.606 1.00 37.93 O
ATOM 26 OP2 A A1817 112.608 121.469 56.926 1.00 36.80 O
ATOM 27 O5' A A1817 113.566 121.006 59.202 1.00 32.94 O
TER

ATOM 1 O3' C B1811 116.975 118.078 65.410 1.00 38.75 O
ATOM 2 P C B1812 118.471 118.018 64.850 1.00 39.35 P
ATOM 3 OP1 C B1812 118.579 116.790 64.030 1.00 40.73 O
ATOM 4 OP2 C B1812 119.376 118.221 66.002 1.00 37.97 O
ATOM 5 O5' C B1812 118.574 119.272 63.871 1.00 40.21 O
ATOM 6 C5' C B1812 117.797 119.320 62.659 1.00 40.42 C
ATOM 7 C4' C B1812 117.702 120.737 62.145 1.00 40.60 C
ATOM 8 O4' C B1812 117.127 121.583 63.174 1.00 40.47 O
ATOM 9 C3' C B1812 119.015 121.430 61.811 1.00 42.20 C
ATOM 10 O3' C B1812 119.494 121.064 60.520 1.00 44.48 O
ATOM 11 C2' C B1812 118.612 122.896 61.863 1.00 41.21 C
ATOM 12 O2' C B1812 117.912 123.315 60.709 1.00 39.42 O
ATOM 13 C1' C B1812 117.662 122.894 63.060 1.00 39.20 C
ATOM 14 N1 C B1812 118.358 123.240 64.310 1.00 35.95 N
ATOM 15 C2 C B1812 118.485 124.591 64.651 1.00 35.85 C
ATOM 16 O2 C B1812 118.014 125.445 63.890 1.00 37.74 O
ATOM 17 N3 C B1812 119.118 124.932 65.794 1.00 33.91 N
ATOM 18 C4 C B1812 119.617 123.982 66.584 1.00 34.37 C
ATOM 19 N4 C B1812 120.223 124.361 67.704 1.00 35.46 N
ATOM 20 C5 C B1812 119.512 122.598 66.259 1.00 34.74 C
ATOM 21 C6 C B1812 118.878 122.274 65.125 1.00 34.62 C
ATOM 22 P G B1813 121.057 121.208 60.170 1.00 43.19 P
ATOM 23 OP1 G B1813 121.282 120.429 58.930 1.00 42.96 O
ATOM 24 OP2 G B1813 121.843 120.896 61.386 1.00 42.53 O
ATOM 25 O5' G B1813 121.249 122.754 59.838 1.00 42.31 O
TER

Atoms:
OP1: (113.301,122.877,53.172)
OP2: (114.086,125.318,53.003)
C3': (115.519,122.194,57.025)
C1': (117.058,123.835,57.717)
C5': (116.124,122.450,54.545)
O4': (117.283,123.556,56.342)
C8: (115.767,125.858,56.837)
O2': (117.095,121.715,58.852)
C6: (115.194,127.900,59.647)
C5: (115.504,126.984,58.623)
C4: (116.216,125.855,58.984)
P: (114.406,123.868,53.117)
C4': (116.606,122.325,55.972)
C2': (116.229,122.681,58.281)
C2: (116.289,126.468,61.097)
N1: (115.603,127.602,60.901)
N3: (116.649,125.536,60.215)
N6: (114.525,129.041,59.447)
N7: (115.227,126.976,57.261)
N9: (116.378,125.127,57.829)
O5': (115.349,123.653,54.384)
O3': (115.047,120.858,57.143)
C2: (118.485,124.591,64.651)
OP1: (118.579,116.790,64.030)
OP2: (119.376,118.221,66.002)
C4: (119.617,123.982,66.584)
O5': (118.574,119.272,63.871)
C3': (119.015,121.430,61.811)
C1': (117.662,122.894,63.060)
O4': (117.127,121.583,63.174)
C5': (117.797,119.320,62.659)
P: (118.471,118.018,64.850)
O2: (118.014,125.445,63.890)
C4': (117.702,120.737,62.145)
C2': (118.612,122.896,61.863)
O2': (117.912,123.315,60.709)
N1: (118.358,123.240,64.310)
N3: (119.118,124.932,65.794)
N4: (120.223,124.361,67.704)
C6: (118.878,122.274,65.125)
C5: (119.512,122.598,66.259)
O3': (119.494,121.064,60.520)
Image (generated by PyMOL):
PyMOL image
show in jmol