Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B9:B11
Extra
PDB:
ATOM 1 O3' G A 8 -158.319 -67.082 31.515 1.00 6.77 O
ATOM 2 P G A 9 -157.533 -67.667 30.248 1.00 12.82 P
ATOM 3 OP1 G A 9 -156.125 -67.883 30.654 1.00 12.82 O
ATOM 4 OP2 G A 9 -157.837 -66.782 29.078 1.00 12.82 O
ATOM 5 O5' G A 9 -158.226 -69.059 30.049 1.00 12.82 O
ATOM 6 C5' G A 9 -157.737 -70.194 30.720 1.00 12.82 C
ATOM 7 C4' G A 9 -157.871 -71.390 29.853 1.00 12.82 C
ATOM 8 O4' G A 9 -159.260 -71.547 29.491 1.00 12.82 O
ATOM 9 C3' G A 9 -157.143 -71.309 28.526 1.00 12.82 C
ATOM 10 O3' G A 9 -155.778 -71.660 28.643 1.00 12.82 O
ATOM 11 C2' G A 9 -157.933 -72.265 27.670 1.00 12.82 C
ATOM 12 O2' G A 9 -157.572 -73.611 27.965 1.00 12.82 O
ATOM 13 C1' G A 9 -159.354 -72.020 28.178 1.00 12.82 C
ATOM 14 N9 G A 9 -160.092 -71.028 27.368 1.00 12.65 N
ATOM 15 C8 G A 9 -160.386 -69.728 27.684 1.00 12.65 C
ATOM 16 N7 G A 9 -161.095 -69.130 26.745 1.00 12.65 N
ATOM 17 C5 G A 9 -161.294 -70.091 25.774 1.00 12.65 C
ATOM 18 C6 G A 9 -161.967 -70.026 24.537 1.00 12.65 C
ATOM 19 O6 G A 9 -162.563 -69.087 24.010 1.00 12.65 O
ATOM 20 N1 G A 9 -161.909 -71.223 23.851 1.00 12.65 N
ATOM 21 C2 G A 9 -161.291 -72.344 24.308 1.00 12.65 C
ATOM 22 N2 G A 9 -161.353 -73.391 23.483 1.00 12.65 N
ATOM 23 N3 G A 9 -160.665 -72.429 25.464 1.00 12.65 N
ATOM 24 C4 G A 9 -160.700 -71.269 26.146 1.00 12.65 C
ATOM 25 P C A 10 -154.711 -71.250 27.505 1.00 10.13 P
ATOM 26 OP1 C A 10 -153.599 -72.252 27.577 1.00 10.13 O
ATOM 27 OP2 C A 10 -154.399 -69.786 27.711 1.00 10.13 O
ATOM 28 O5' C A 10 -155.526 -71.437 26.152 1.00 10.13 O
TER
ATOM 1 O3' C B 10 -154.671 -72.239 22.333 1.00 10.13 O
ATOM 2 P C B 11 -153.196 -71.626 22.135 1.00 4.44 P
ATOM 3 OP1 C B 11 -152.512 -72.511 21.149 1.00 4.44 O
ATOM 4 OP2 C B 11 -152.587 -71.438 23.498 1.00 4.44 O
ATOM 5 O5' C B 11 -153.473 -70.222 21.473 1.00 4.44 O
ATOM 6 C5' C B 11 -153.492 -70.112 20.071 1.00 4.44 C
ATOM 7 C4' C B 11 -154.325 -68.961 19.628 1.00 4.44 C
ATOM 8 O4' C B 11 -155.200 -68.564 20.713 1.00 4.44 O
ATOM 9 C3' C B 11 -153.539 -67.729 19.228 1.00 4.44 C
ATOM 10 O3' C B 11 -154.076 -67.188 18.030 1.00 4.44 O
ATOM 11 C2' C B 11 -153.750 -66.771 20.384 1.00 4.44 C
ATOM 12 O2' C B 11 -153.712 -65.414 20.020 1.00 4.44 O
ATOM 13 C1' C B 11 -155.115 -67.184 20.915 1.00 4.44 C
ATOM 14 N1 C B 11 -155.252 -66.951 22.322 1.00 4.16 N
ATOM 15 C2 C B 11 -155.782 -65.740 22.723 1.00 4.16 C
ATOM 16 O2 C B 11 -156.155 -64.959 21.859 1.00 4.16 O
ATOM 17 N3 C B 11 -155.897 -65.437 24.025 1.00 4.16 N
ATOM 18 C4 C B 11 -155.458 -66.343 24.891 1.00 4.16 C
ATOM 19 N4 C B 11 -155.584 -66.008 26.176 1.00 4.16 N
ATOM 20 C5 C B 11 -154.894 -67.610 24.505 1.00 4.16 C
ATOM 21 C6 C B 11 -154.810 -67.877 23.205 1.00 4.16 C
ATOM 22 P G B 12 -153.384 -67.569 16.643 1.00 3.14 P
ATOM 23 OP1 G B 12 -153.087 -69.030 16.696 1.00 3.14 O
ATOM 24 OP2 G B 12 -152.261 -66.611 16.458 1.00 3.14 O
ATOM 25 O5' G B 12 -154.510 -67.279 15.566 1.00 3.14 O
TER
ATOM 2 P G A 9 -157.533 -67.667 30.248 1.00 12.82 P
ATOM 3 OP1 G A 9 -156.125 -67.883 30.654 1.00 12.82 O
ATOM 4 OP2 G A 9 -157.837 -66.782 29.078 1.00 12.82 O
ATOM 5 O5' G A 9 -158.226 -69.059 30.049 1.00 12.82 O
ATOM 6 C5' G A 9 -157.737 -70.194 30.720 1.00 12.82 C
ATOM 7 C4' G A 9 -157.871 -71.390 29.853 1.00 12.82 C
ATOM 8 O4' G A 9 -159.260 -71.547 29.491 1.00 12.82 O
ATOM 9 C3' G A 9 -157.143 -71.309 28.526 1.00 12.82 C
ATOM 10 O3' G A 9 -155.778 -71.660 28.643 1.00 12.82 O
ATOM 11 C2' G A 9 -157.933 -72.265 27.670 1.00 12.82 C
ATOM 12 O2' G A 9 -157.572 -73.611 27.965 1.00 12.82 O
ATOM 13 C1' G A 9 -159.354 -72.020 28.178 1.00 12.82 C
ATOM 14 N9 G A 9 -160.092 -71.028 27.368 1.00 12.65 N
ATOM 15 C8 G A 9 -160.386 -69.728 27.684 1.00 12.65 C
ATOM 16 N7 G A 9 -161.095 -69.130 26.745 1.00 12.65 N
ATOM 17 C5 G A 9 -161.294 -70.091 25.774 1.00 12.65 C
ATOM 18 C6 G A 9 -161.967 -70.026 24.537 1.00 12.65 C
ATOM 19 O6 G A 9 -162.563 -69.087 24.010 1.00 12.65 O
ATOM 20 N1 G A 9 -161.909 -71.223 23.851 1.00 12.65 N
ATOM 21 C2 G A 9 -161.291 -72.344 24.308 1.00 12.65 C
ATOM 22 N2 G A 9 -161.353 -73.391 23.483 1.00 12.65 N
ATOM 23 N3 G A 9 -160.665 -72.429 25.464 1.00 12.65 N
ATOM 24 C4 G A 9 -160.700 -71.269 26.146 1.00 12.65 C
ATOM 25 P C A 10 -154.711 -71.250 27.505 1.00 10.13 P
ATOM 26 OP1 C A 10 -153.599 -72.252 27.577 1.00 10.13 O
ATOM 27 OP2 C A 10 -154.399 -69.786 27.711 1.00 10.13 O
ATOM 28 O5' C A 10 -155.526 -71.437 26.152 1.00 10.13 O
TER
ATOM 1 O3' C B 10 -154.671 -72.239 22.333 1.00 10.13 O
ATOM 2 P C B 11 -153.196 -71.626 22.135 1.00 4.44 P
ATOM 3 OP1 C B 11 -152.512 -72.511 21.149 1.00 4.44 O
ATOM 4 OP2 C B 11 -152.587 -71.438 23.498 1.00 4.44 O
ATOM 5 O5' C B 11 -153.473 -70.222 21.473 1.00 4.44 O
ATOM 6 C5' C B 11 -153.492 -70.112 20.071 1.00 4.44 C
ATOM 7 C4' C B 11 -154.325 -68.961 19.628 1.00 4.44 C
ATOM 8 O4' C B 11 -155.200 -68.564 20.713 1.00 4.44 O
ATOM 9 C3' C B 11 -153.539 -67.729 19.228 1.00 4.44 C
ATOM 10 O3' C B 11 -154.076 -67.188 18.030 1.00 4.44 O
ATOM 11 C2' C B 11 -153.750 -66.771 20.384 1.00 4.44 C
ATOM 12 O2' C B 11 -153.712 -65.414 20.020 1.00 4.44 O
ATOM 13 C1' C B 11 -155.115 -67.184 20.915 1.00 4.44 C
ATOM 14 N1 C B 11 -155.252 -66.951 22.322 1.00 4.16 N
ATOM 15 C2 C B 11 -155.782 -65.740 22.723 1.00 4.16 C
ATOM 16 O2 C B 11 -156.155 -64.959 21.859 1.00 4.16 O
ATOM 17 N3 C B 11 -155.897 -65.437 24.025 1.00 4.16 N
ATOM 18 C4 C B 11 -155.458 -66.343 24.891 1.00 4.16 C
ATOM 19 N4 C B 11 -155.584 -66.008 26.176 1.00 4.16 N
ATOM 20 C5 C B 11 -154.894 -67.610 24.505 1.00 4.16 C
ATOM 21 C6 C B 11 -154.810 -67.877 23.205 1.00 4.16 C
ATOM 22 P G B 12 -153.384 -67.569 16.643 1.00 3.14 P
ATOM 23 OP1 G B 12 -153.087 -69.030 16.696 1.00 3.14 O
ATOM 24 OP2 G B 12 -152.261 -66.611 16.458 1.00 3.14 O
ATOM 25 O5' G B 12 -154.510 -67.279 15.566 1.00 3.14 O
TER
Atoms:
OP1: (-156.125,-67.883,30.654)
OP2: (-157.837,-66.782,29.078)
C3': (-157.143,-71.309,28.526)
C1': (-159.354,-72.020,28.178)
C5': (-157.737,-70.194,30.720)
O6: (-162.563,-69.087,24.010)
O4': (-159.260,-71.547,29.491)
C8: (-160.386,-69.728,27.684)
C2: (-161.291,-72.344,24.308)
C6: (-161.967,-70.026,24.537)
C5: (-161.294,-70.091,25.774)
C4: (-160.700,-71.269,26.146)
P: (-157.533,-67.667,30.248)
C4': (-157.871,-71.390,29.853)
C2': (-157.933,-72.265,27.670)
O2': (-157.572,-73.611,27.965)
N1: (-161.909,-71.223,23.851)
N2: (-161.353,-73.391,23.483)
N3: (-160.665,-72.429,25.464)
N7: (-161.095,-69.130,26.745)
N9: (-160.092,-71.028,27.368)
O5': (-158.226,-69.059,30.049)
O3': (-155.778,-71.660,28.643)
OP2: (-157.837,-66.782,29.078)
C3': (-157.143,-71.309,28.526)
C1': (-159.354,-72.020,28.178)
C5': (-157.737,-70.194,30.720)
O6: (-162.563,-69.087,24.010)
O4': (-159.260,-71.547,29.491)
C8: (-160.386,-69.728,27.684)
C2: (-161.291,-72.344,24.308)
C6: (-161.967,-70.026,24.537)
C5: (-161.294,-70.091,25.774)
C4: (-160.700,-71.269,26.146)
P: (-157.533,-67.667,30.248)
C4': (-157.871,-71.390,29.853)
C2': (-157.933,-72.265,27.670)
O2': (-157.572,-73.611,27.965)
N1: (-161.909,-71.223,23.851)
N2: (-161.353,-73.391,23.483)
N3: (-160.665,-72.429,25.464)
N7: (-161.095,-69.130,26.745)
N9: (-160.092,-71.028,27.368)
O5': (-158.226,-69.059,30.049)
O3': (-155.778,-71.660,28.643)
C2: (-155.782,-65.740,22.723)
OP1: (-152.512,-72.511,21.149)
OP2: (-152.587,-71.438,23.498)
C4: (-155.458,-66.343,24.891)
O5': (-153.473,-70.222,21.473)
C3': (-153.539,-67.729,19.228)
C1': (-155.115,-67.184,20.915)
O4': (-155.200,-68.564,20.713)
C5': (-153.492,-70.112,20.071)
P: (-153.196,-71.626,22.135)
O2: (-156.155,-64.959,21.859)
C4': (-154.325,-68.961,19.628)
C2': (-153.750,-66.771,20.384)
O2': (-153.712,-65.414,20.020)
N1: (-155.252,-66.951,22.322)
N3: (-155.897,-65.437,24.025)
N4: (-155.584,-66.008,26.176)
C6: (-154.810,-67.877,23.205)
C5: (-154.894,-67.610,24.505)
O3': (-154.076,-67.188,18.030)
OP1: (-152.512,-72.511,21.149)
OP2: (-152.587,-71.438,23.498)
C4: (-155.458,-66.343,24.891)
O5': (-153.473,-70.222,21.473)
C3': (-153.539,-67.729,19.228)
C1': (-155.115,-67.184,20.915)
O4': (-155.200,-68.564,20.713)
C5': (-153.492,-70.112,20.071)
P: (-153.196,-71.626,22.135)
O2: (-156.155,-64.959,21.859)
C4': (-154.325,-68.961,19.628)
C2': (-153.750,-66.771,20.384)
O2': (-153.712,-65.414,20.020)
N1: (-155.252,-66.951,22.322)
N3: (-155.897,-65.437,24.025)
N4: (-155.584,-66.008,26.176)
C6: (-154.810,-67.877,23.205)
C5: (-154.894,-67.610,24.505)
O3': (-154.076,-67.188,18.030)
Image (generated by PyMOL):