Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2897:2899
Extra
PDB:
ATOM 1 O3' G A 896 -25.987 -39.140 115.994 1.00197.75 O
ATOM 2 P A A 897 -26.637 -37.893 116.783 1.00143.94 P
ATOM 3 OP1 A A 897 -25.752 -37.597 117.939 1.00144.66 O
ATOM 4 OP2 A A 897 -28.064 -38.234 117.048 1.00144.32 O
ATOM 5 O5' A A 897 -26.535 -36.714 115.709 1.00141.72 O
ATOM 6 C5' A A 897 -27.651 -36.353 114.911 1.00140.51 C
ATOM 7 C4' A A 897 -27.348 -36.469 113.436 1.00139.62 C
ATOM 8 O4' A A 897 -26.798 -37.780 113.155 1.00141.06 O
ATOM 9 C3' A A 897 -28.551 -36.326 112.506 1.00138.61 C
ATOM 10 O3' A A 897 -28.783 -34.980 112.124 1.00136.75 O
ATOM 11 C2' A A 897 -28.223 -37.240 111.326 1.00138.92 C
ATOM 12 O2' A A 897 -27.444 -36.555 110.353 1.00137.58 O
ATOM 13 C1' A A 897 -27.351 -38.312 111.976 1.00140.78 C
ATOM 14 N9 A A 897 -28.100 -39.534 112.336 1.00142.39 N
ATOM 15 C8 A A 897 -27.781 -40.267 113.451 1.00144.14 C
ATOM 16 N7 A A 897 -28.514 -41.336 113.646 1.00145.49 N
ATOM 17 C5 A A 897 -29.379 -41.323 112.574 1.00144.58 C
ATOM 18 C6 A A 897 -30.398 -42.214 112.236 1.00145.33 C
ATOM 19 N6 A A 897 -30.688 -43.281 112.967 1.00147.16 N
ATOM 20 N1 A A 897 -31.103 -41.968 111.123 1.00144.17 N
ATOM 21 C2 A A 897 -30.775 -40.877 110.424 1.00142.38 C
ATOM 22 N3 A A 897 -29.830 -39.955 110.630 1.00141.50 N
ATOM 23 C4 A A 897 -29.141 -40.232 111.746 1.00142.69 C
ATOM 24 P U A 898 -29.810 -34.056 112.952 1.00133.84 P
ATOM 25 OP1 U A 898 -29.984 -32.800 112.176 1.00131.87 O
ATOM 26 OP2 U A 898 -29.302 -33.965 114.348 1.00134.80 O
ATOM 27 O5' U A 898 -31.164 -34.910 112.910 1.00134.63 O
TER
ATOM 1 O3' U B 898 -34.915 -35.143 113.241 1.00134.86 O
ATOM 2 P U B 899 -35.321 -34.648 114.712 1.00134.84 P
ATOM 3 OP1 U B 899 -36.584 -33.865 114.577 1.00133.83 O
ATOM 4 OP2 U B 899 -34.122 -33.983 115.291 1.00134.58 O
ATOM 5 O5' U B 899 -35.613 -36.014 115.481 1.00136.97 O
ATOM 6 C5' U B 899 -36.917 -36.574 115.486 1.00137.58 C
ATOM 7 C4' U B 899 -37.012 -37.773 116.392 1.00139.68 C
ATOM 8 O4' U B 899 -35.886 -38.656 116.162 1.00140.58 O
ATOM 9 C3' U B 899 -36.950 -37.499 117.884 1.00140.52 C
ATOM 10 O3' U B 899 -38.176 -37.030 118.417 1.00140.38 O
ATOM 11 C2' U B 899 -36.525 -38.855 118.431 1.00142.58 C
ATOM 12 O2' U B 899 -37.616 -39.764 118.429 1.00143.66 O
ATOM 13 C1' U B 899 -35.530 -39.302 117.370 1.00142.31 C
ATOM 14 N1 U B 899 -34.141 -38.921 117.725 1.00142.21 N
ATOM 15 C2 U B 899 -33.546 -39.549 118.808 1.00143.88 C
ATOM 16 O2 U B 899 -34.103 -40.404 119.485 1.00145.45 O
ATOM 17 N3 U B 899 -32.260 -39.131 119.072 1.00143.70 N
ATOM 18 C4 U B 899 -31.508 -38.184 118.398 1.00142.08 C
ATOM 19 O4 U B 899 -30.353 -37.922 118.759 1.00142.19 O
ATOM 20 C5 U B 899 -32.198 -37.582 117.299 1.00140.42 C
ATOM 21 C6 U B 899 -33.450 -37.962 117.010 1.00140.54 C
ATOM 22 P U B 900 -38.193 -36.075 119.718 1.00120.78 P
ATOM 23 OP1 U B 900 -39.587 -36.082 120.232 1.00121.23 O
ATOM 24 OP2 U B 900 -37.595 -34.786 119.320 1.00118.98 O
ATOM 25 O5' U B 900 -37.214 -36.826 120.750 1.00122.53 O
TER
ATOM 2 P A A 897 -26.637 -37.893 116.783 1.00143.94 P
ATOM 3 OP1 A A 897 -25.752 -37.597 117.939 1.00144.66 O
ATOM 4 OP2 A A 897 -28.064 -38.234 117.048 1.00144.32 O
ATOM 5 O5' A A 897 -26.535 -36.714 115.709 1.00141.72 O
ATOM 6 C5' A A 897 -27.651 -36.353 114.911 1.00140.51 C
ATOM 7 C4' A A 897 -27.348 -36.469 113.436 1.00139.62 C
ATOM 8 O4' A A 897 -26.798 -37.780 113.155 1.00141.06 O
ATOM 9 C3' A A 897 -28.551 -36.326 112.506 1.00138.61 C
ATOM 10 O3' A A 897 -28.783 -34.980 112.124 1.00136.75 O
ATOM 11 C2' A A 897 -28.223 -37.240 111.326 1.00138.92 C
ATOM 12 O2' A A 897 -27.444 -36.555 110.353 1.00137.58 O
ATOM 13 C1' A A 897 -27.351 -38.312 111.976 1.00140.78 C
ATOM 14 N9 A A 897 -28.100 -39.534 112.336 1.00142.39 N
ATOM 15 C8 A A 897 -27.781 -40.267 113.451 1.00144.14 C
ATOM 16 N7 A A 897 -28.514 -41.336 113.646 1.00145.49 N
ATOM 17 C5 A A 897 -29.379 -41.323 112.574 1.00144.58 C
ATOM 18 C6 A A 897 -30.398 -42.214 112.236 1.00145.33 C
ATOM 19 N6 A A 897 -30.688 -43.281 112.967 1.00147.16 N
ATOM 20 N1 A A 897 -31.103 -41.968 111.123 1.00144.17 N
ATOM 21 C2 A A 897 -30.775 -40.877 110.424 1.00142.38 C
ATOM 22 N3 A A 897 -29.830 -39.955 110.630 1.00141.50 N
ATOM 23 C4 A A 897 -29.141 -40.232 111.746 1.00142.69 C
ATOM 24 P U A 898 -29.810 -34.056 112.952 1.00133.84 P
ATOM 25 OP1 U A 898 -29.984 -32.800 112.176 1.00131.87 O
ATOM 26 OP2 U A 898 -29.302 -33.965 114.348 1.00134.80 O
ATOM 27 O5' U A 898 -31.164 -34.910 112.910 1.00134.63 O
TER
ATOM 1 O3' U B 898 -34.915 -35.143 113.241 1.00134.86 O
ATOM 2 P U B 899 -35.321 -34.648 114.712 1.00134.84 P
ATOM 3 OP1 U B 899 -36.584 -33.865 114.577 1.00133.83 O
ATOM 4 OP2 U B 899 -34.122 -33.983 115.291 1.00134.58 O
ATOM 5 O5' U B 899 -35.613 -36.014 115.481 1.00136.97 O
ATOM 6 C5' U B 899 -36.917 -36.574 115.486 1.00137.58 C
ATOM 7 C4' U B 899 -37.012 -37.773 116.392 1.00139.68 C
ATOM 8 O4' U B 899 -35.886 -38.656 116.162 1.00140.58 O
ATOM 9 C3' U B 899 -36.950 -37.499 117.884 1.00140.52 C
ATOM 10 O3' U B 899 -38.176 -37.030 118.417 1.00140.38 O
ATOM 11 C2' U B 899 -36.525 -38.855 118.431 1.00142.58 C
ATOM 12 O2' U B 899 -37.616 -39.764 118.429 1.00143.66 O
ATOM 13 C1' U B 899 -35.530 -39.302 117.370 1.00142.31 C
ATOM 14 N1 U B 899 -34.141 -38.921 117.725 1.00142.21 N
ATOM 15 C2 U B 899 -33.546 -39.549 118.808 1.00143.88 C
ATOM 16 O2 U B 899 -34.103 -40.404 119.485 1.00145.45 O
ATOM 17 N3 U B 899 -32.260 -39.131 119.072 1.00143.70 N
ATOM 18 C4 U B 899 -31.508 -38.184 118.398 1.00142.08 C
ATOM 19 O4 U B 899 -30.353 -37.922 118.759 1.00142.19 O
ATOM 20 C5 U B 899 -32.198 -37.582 117.299 1.00140.42 C
ATOM 21 C6 U B 899 -33.450 -37.962 117.010 1.00140.54 C
ATOM 22 P U B 900 -38.193 -36.075 119.718 1.00120.78 P
ATOM 23 OP1 U B 900 -39.587 -36.082 120.232 1.00121.23 O
ATOM 24 OP2 U B 900 -37.595 -34.786 119.320 1.00118.98 O
ATOM 25 O5' U B 900 -37.214 -36.826 120.750 1.00122.53 O
TER
Atoms:
OP1: (-25.752,-37.597,117.939)
OP2: (-28.064,-38.234,117.048)
C3': (-28.551,-36.326,112.506)
C1': (-27.351,-38.312,111.976)
C5': (-27.651,-36.353,114.911)
O4': (-26.798,-37.780,113.155)
C8: (-27.781,-40.267,113.451)
O2': (-27.444,-36.555,110.353)
C6: (-30.398,-42.214,112.236)
C5: (-29.379,-41.323,112.574)
C4: (-29.141,-40.232,111.746)
P: (-26.637,-37.893,116.783)
C4': (-27.348,-36.469,113.436)
C2': (-28.223,-37.240,111.326)
C2: (-30.775,-40.877,110.424)
N1: (-31.103,-41.968,111.123)
N3: (-29.830,-39.955,110.630)
N6: (-30.688,-43.281,112.967)
N7: (-28.514,-41.336,113.646)
N9: (-28.100,-39.534,112.336)
O5': (-26.535,-36.714,115.709)
O3': (-28.783,-34.980,112.124)
OP2: (-28.064,-38.234,117.048)
C3': (-28.551,-36.326,112.506)
C1': (-27.351,-38.312,111.976)
C5': (-27.651,-36.353,114.911)
O4': (-26.798,-37.780,113.155)
C8: (-27.781,-40.267,113.451)
O2': (-27.444,-36.555,110.353)
C6: (-30.398,-42.214,112.236)
C5: (-29.379,-41.323,112.574)
C4: (-29.141,-40.232,111.746)
P: (-26.637,-37.893,116.783)
C4': (-27.348,-36.469,113.436)
C2': (-28.223,-37.240,111.326)
C2: (-30.775,-40.877,110.424)
N1: (-31.103,-41.968,111.123)
N3: (-29.830,-39.955,110.630)
N6: (-30.688,-43.281,112.967)
N7: (-28.514,-41.336,113.646)
N9: (-28.100,-39.534,112.336)
O5': (-26.535,-36.714,115.709)
O3': (-28.783,-34.980,112.124)
C4: (-31.508,-38.184,118.398)
N3: (-32.260,-39.131,119.072)
OP1: (-36.584,-33.865,114.577)
OP2: (-34.122,-33.983,115.291)
C2: (-33.546,-39.549,118.808)
C1': (-35.530,-39.302,117.370)
C3': (-36.950,-37.499,117.884)
O5': (-35.613,-36.014,115.481)
O4': (-35.886,-38.656,116.162)
C5': (-36.917,-36.574,115.486)
P: (-35.321,-34.648,114.712)
C4': (-37.012,-37.773,116.392)
C2': (-36.525,-38.855,118.431)
O2': (-37.616,-39.764,118.429)
N1: (-34.141,-38.921,117.725)
O4: (-30.353,-37.922,118.759)
O2: (-34.103,-40.404,119.485)
C6: (-33.450,-37.962,117.010)
C5: (-32.198,-37.582,117.299)
O3': (-38.176,-37.030,118.417)
N3: (-32.260,-39.131,119.072)
OP1: (-36.584,-33.865,114.577)
OP2: (-34.122,-33.983,115.291)
C2: (-33.546,-39.549,118.808)
C1': (-35.530,-39.302,117.370)
C3': (-36.950,-37.499,117.884)
O5': (-35.613,-36.014,115.481)
O4': (-35.886,-38.656,116.162)
C5': (-36.917,-36.574,115.486)
P: (-35.321,-34.648,114.712)
C4': (-37.012,-37.773,116.392)
C2': (-36.525,-38.855,118.431)
O2': (-37.616,-39.764,118.429)
N1: (-34.141,-38.921,117.725)
O4: (-30.353,-37.922,118.759)
O2: (-34.103,-40.404,119.485)
C6: (-33.450,-37.962,117.010)
C5: (-32.198,-37.582,117.299)
O3': (-38.176,-37.030,118.417)
Image (generated by PyMOL):