Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:37:39
Extra
PDB:
ATOM 1 O3' G A 6 31.776 -78.253 28.190 1.00 58.83 O
ATOM 2 P G A 7 31.387 -76.712 28.189 1.00 56.20 P
ATOM 3 OP1 G A 7 31.399 -76.275 29.580 1.00 55.19 O
ATOM 4 OP2 G A 7 30.141 -76.581 27.410 1.00 56.82 O
ATOM 5 O5' G A 7 32.591 -76.020 27.387 1.00 56.20 O
ATOM 6 C5' G A 7 33.953 -76.224 27.758 1.00 55.85 C
ATOM 7 C4' G A 7 34.920 -75.509 26.821 1.00 55.98 C
ATOM 8 O4' G A 7 35.147 -76.309 25.635 1.00 57.00 O
ATOM 9 C3' G A 7 34.486 -74.140 26.301 1.00 55.80 C
ATOM 10 O3' G A 7 34.837 -73.097 27.168 1.00 54.81 O
ATOM 11 C2' G A 7 35.177 -74.038 24.962 1.00 56.48 C
ATOM 12 O2' G A 7 36.514 -73.624 25.137 1.00 56.02 O
ATOM 13 C1' G A 7 35.157 -75.495 24.488 1.00 57.37 C
ATOM 14 N9 G A 7 33.929 -75.789 23.705 1.00 58.16 N
ATOM 15 C8 G A 7 32.728 -76.303 24.171 1.00 58.26 C
ATOM 16 N7 G A 7 31.809 -76.387 23.244 1.00 59.02 N
ATOM 17 C5 G A 7 32.435 -75.900 22.100 1.00 59.43 C
ATOM 18 C6 G A 7 31.963 -75.738 20.771 1.00 60.28 C
ATOM 19 O6 G A 7 30.852 -76.020 20.312 1.00 60.85 O
ATOM 20 N1 G A 7 32.923 -75.199 19.921 1.00 60.46 N
ATOM 21 C2 G A 7 34.186 -74.862 20.299 1.00 59.90 C
ATOM 22 N2 G A 7 34.967 -74.361 19.341 1.00 60.20 N
ATOM 23 N3 G A 7 34.650 -75.008 21.524 1.00 59.11 N
ATOM 24 C4 G A 7 33.732 -75.525 22.367 1.00 58.92 C
ATOM 25 P C A 8 33.810 -71.916 27.441 1.00 56.16 P
ATOM 26 OP1 C A 8 34.377 -71.063 28.494 1.00 55.12 O
ATOM 27 OP2 C A 8 32.496 -72.528 27.672 1.00 56.47 O
ATOM 28 O5' C A 8 33.820 -71.149 26.064 1.00 56.70 O
TER
ATOM 1 O3' C B 8 33.682 -67.629 24.158 1.00 56.56 O
ATOM 2 P C B 9 32.549 -66.886 25.053 1.00 57.60 P
ATOM 3 OP1 C B 9 32.987 -65.457 25.198 1.00 56.95 O
ATOM 4 OP2 C B 9 32.322 -67.684 26.267 1.00 57.20 O
ATOM 5 O5' C B 9 31.239 -66.977 24.162 1.00 58.37 O
ATOM 6 C5' C B 9 31.264 -66.821 22.764 1.00 59.16 C
ATOM 7 C4' C B 9 30.005 -67.361 22.173 1.00 59.91 C
ATOM 8 O4' C B 9 29.883 -68.763 22.533 1.00 60.23 O
ATOM 9 C3' C B 9 28.738 -66.693 22.668 1.00 59.56 C
ATOM 10 O3' C B 9 27.803 -66.687 21.612 1.00 60.35 O
ATOM 11 C2' C B 9 28.266 -67.635 23.769 1.00 59.32 C
ATOM 12 O2' C B 9 26.888 -67.564 24.032 1.00 59.36 O
ATOM 13 C1' C B 9 28.669 -68.988 23.202 1.00 60.10 C
ATOM 14 N1 C B 9 28.910 -70.041 24.212 1.00 59.85 N
ATOM 15 C2 C B 9 28.150 -71.224 24.208 1.00 60.43 C
ATOM 16 O2 C B 9 27.257 -71.341 23.385 1.00 61.12 O
ATOM 17 N3 C B 9 28.356 -72.210 25.117 1.00 60.23 N
ATOM 18 C4 C B 9 29.334 -72.062 26.023 1.00 59.47 C
ATOM 19 N4 C B 9 29.507 -73.048 26.899 1.00 59.31 N
ATOM 20 C5 C B 9 30.168 -70.898 26.061 1.00 58.86 C
ATOM 21 C6 C B 9 29.926 -69.934 25.138 1.00 59.08 C
ATOM 22 P A B 10 27.112 -65.326 21.145 1.00 55.84 P
ATOM 23 OP1 A B 10 28.152 -64.477 20.537 1.00 55.74 O
ATOM 24 OP2 A B 10 26.366 -64.816 22.308 1.00 55.07 O
ATOM 25 O5' A B 10 26.092 -65.820 20.007 1.00 56.88 O
TER
ATOM 2 P G A 7 31.387 -76.712 28.189 1.00 56.20 P
ATOM 3 OP1 G A 7 31.399 -76.275 29.580 1.00 55.19 O
ATOM 4 OP2 G A 7 30.141 -76.581 27.410 1.00 56.82 O
ATOM 5 O5' G A 7 32.591 -76.020 27.387 1.00 56.20 O
ATOM 6 C5' G A 7 33.953 -76.224 27.758 1.00 55.85 C
ATOM 7 C4' G A 7 34.920 -75.509 26.821 1.00 55.98 C
ATOM 8 O4' G A 7 35.147 -76.309 25.635 1.00 57.00 O
ATOM 9 C3' G A 7 34.486 -74.140 26.301 1.00 55.80 C
ATOM 10 O3' G A 7 34.837 -73.097 27.168 1.00 54.81 O
ATOM 11 C2' G A 7 35.177 -74.038 24.962 1.00 56.48 C
ATOM 12 O2' G A 7 36.514 -73.624 25.137 1.00 56.02 O
ATOM 13 C1' G A 7 35.157 -75.495 24.488 1.00 57.37 C
ATOM 14 N9 G A 7 33.929 -75.789 23.705 1.00 58.16 N
ATOM 15 C8 G A 7 32.728 -76.303 24.171 1.00 58.26 C
ATOM 16 N7 G A 7 31.809 -76.387 23.244 1.00 59.02 N
ATOM 17 C5 G A 7 32.435 -75.900 22.100 1.00 59.43 C
ATOM 18 C6 G A 7 31.963 -75.738 20.771 1.00 60.28 C
ATOM 19 O6 G A 7 30.852 -76.020 20.312 1.00 60.85 O
ATOM 20 N1 G A 7 32.923 -75.199 19.921 1.00 60.46 N
ATOM 21 C2 G A 7 34.186 -74.862 20.299 1.00 59.90 C
ATOM 22 N2 G A 7 34.967 -74.361 19.341 1.00 60.20 N
ATOM 23 N3 G A 7 34.650 -75.008 21.524 1.00 59.11 N
ATOM 24 C4 G A 7 33.732 -75.525 22.367 1.00 58.92 C
ATOM 25 P C A 8 33.810 -71.916 27.441 1.00 56.16 P
ATOM 26 OP1 C A 8 34.377 -71.063 28.494 1.00 55.12 O
ATOM 27 OP2 C A 8 32.496 -72.528 27.672 1.00 56.47 O
ATOM 28 O5' C A 8 33.820 -71.149 26.064 1.00 56.70 O
TER
ATOM 1 O3' C B 8 33.682 -67.629 24.158 1.00 56.56 O
ATOM 2 P C B 9 32.549 -66.886 25.053 1.00 57.60 P
ATOM 3 OP1 C B 9 32.987 -65.457 25.198 1.00 56.95 O
ATOM 4 OP2 C B 9 32.322 -67.684 26.267 1.00 57.20 O
ATOM 5 O5' C B 9 31.239 -66.977 24.162 1.00 58.37 O
ATOM 6 C5' C B 9 31.264 -66.821 22.764 1.00 59.16 C
ATOM 7 C4' C B 9 30.005 -67.361 22.173 1.00 59.91 C
ATOM 8 O4' C B 9 29.883 -68.763 22.533 1.00 60.23 O
ATOM 9 C3' C B 9 28.738 -66.693 22.668 1.00 59.56 C
ATOM 10 O3' C B 9 27.803 -66.687 21.612 1.00 60.35 O
ATOM 11 C2' C B 9 28.266 -67.635 23.769 1.00 59.32 C
ATOM 12 O2' C B 9 26.888 -67.564 24.032 1.00 59.36 O
ATOM 13 C1' C B 9 28.669 -68.988 23.202 1.00 60.10 C
ATOM 14 N1 C B 9 28.910 -70.041 24.212 1.00 59.85 N
ATOM 15 C2 C B 9 28.150 -71.224 24.208 1.00 60.43 C
ATOM 16 O2 C B 9 27.257 -71.341 23.385 1.00 61.12 O
ATOM 17 N3 C B 9 28.356 -72.210 25.117 1.00 60.23 N
ATOM 18 C4 C B 9 29.334 -72.062 26.023 1.00 59.47 C
ATOM 19 N4 C B 9 29.507 -73.048 26.899 1.00 59.31 N
ATOM 20 C5 C B 9 30.168 -70.898 26.061 1.00 58.86 C
ATOM 21 C6 C B 9 29.926 -69.934 25.138 1.00 59.08 C
ATOM 22 P A B 10 27.112 -65.326 21.145 1.00 55.84 P
ATOM 23 OP1 A B 10 28.152 -64.477 20.537 1.00 55.74 O
ATOM 24 OP2 A B 10 26.366 -64.816 22.308 1.00 55.07 O
ATOM 25 O5' A B 10 26.092 -65.820 20.007 1.00 56.88 O
TER
Atoms:
OP1: (31.399,-76.275,29.580)
OP2: (30.141,-76.581,27.410)
C3': (34.486,-74.140,26.301)
C1': (35.157,-75.495,24.488)
C5': (33.953,-76.224,27.758)
O6: (30.852,-76.020,20.312)
O4': (35.147,-76.309,25.635)
C8: (32.728,-76.303,24.171)
C2: (34.186,-74.862,20.299)
C6: (31.963,-75.738,20.771)
C5: (32.435,-75.900,22.100)
C4: (33.732,-75.525,22.367)
P: (31.387,-76.712,28.189)
C4': (34.920,-75.509,26.821)
C2': (35.177,-74.038,24.962)
O2': (36.514,-73.624,25.137)
N1: (32.923,-75.199,19.921)
N2: (34.967,-74.361,19.341)
N3: (34.650,-75.008,21.524)
N7: (31.809,-76.387,23.244)
N9: (33.929,-75.789,23.705)
O5': (32.591,-76.020,27.387)
O3': (34.837,-73.097,27.168)
OP2: (30.141,-76.581,27.410)
C3': (34.486,-74.140,26.301)
C1': (35.157,-75.495,24.488)
C5': (33.953,-76.224,27.758)
O6: (30.852,-76.020,20.312)
O4': (35.147,-76.309,25.635)
C8: (32.728,-76.303,24.171)
C2: (34.186,-74.862,20.299)
C6: (31.963,-75.738,20.771)
C5: (32.435,-75.900,22.100)
C4: (33.732,-75.525,22.367)
P: (31.387,-76.712,28.189)
C4': (34.920,-75.509,26.821)
C2': (35.177,-74.038,24.962)
O2': (36.514,-73.624,25.137)
N1: (32.923,-75.199,19.921)
N2: (34.967,-74.361,19.341)
N3: (34.650,-75.008,21.524)
N7: (31.809,-76.387,23.244)
N9: (33.929,-75.789,23.705)
O5': (32.591,-76.020,27.387)
O3': (34.837,-73.097,27.168)
C2: (28.150,-71.224,24.208)
OP1: (32.987,-65.457,25.198)
OP2: (32.322,-67.684,26.267)
C4: (29.334,-72.062,26.023)
O5': (31.239,-66.977,24.162)
C3': (28.738,-66.693,22.668)
C1': (28.669,-68.988,23.202)
O4': (29.883,-68.763,22.533)
C5': (31.264,-66.821,22.764)
P: (32.549,-66.886,25.053)
O2: (27.257,-71.341,23.385)
C4': (30.005,-67.361,22.173)
C2': (28.266,-67.635,23.769)
O2': (26.888,-67.564,24.032)
N1: (28.910,-70.041,24.212)
N3: (28.356,-72.210,25.117)
N4: (29.507,-73.048,26.899)
C6: (29.926,-69.934,25.138)
C5: (30.168,-70.898,26.061)
O3': (27.803,-66.687,21.612)
OP1: (32.987,-65.457,25.198)
OP2: (32.322,-67.684,26.267)
C4: (29.334,-72.062,26.023)
O5': (31.239,-66.977,24.162)
C3': (28.738,-66.693,22.668)
C1': (28.669,-68.988,23.202)
O4': (29.883,-68.763,22.533)
C5': (31.264,-66.821,22.764)
P: (32.549,-66.886,25.053)
O2: (27.257,-71.341,23.385)
C4': (30.005,-67.361,22.173)
C2': (28.266,-67.635,23.769)
O2': (26.888,-67.564,24.032)
N1: (28.910,-70.041,24.212)
N3: (28.356,-72.210,25.117)
N4: (29.507,-73.048,26.899)
C6: (29.926,-69.934,25.138)
C5: (30.168,-70.898,26.061)
O3': (27.803,-66.687,21.612)
Image (generated by PyMOL):