Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.263 98.599 121.908 1.00 65.22 O
ATOM 2 P C A 559 -4.655 97.650 123.147 1.00 66.98 P
ATOM 3 OP1 C A 559 -3.918 98.166 124.331 1.00 66.78 O
ATOM 4 OP2 C A 559 -4.491 96.226 122.741 1.00 63.66 O
ATOM 5 O5' C A 559 -6.206 97.930 123.372 1.00 67.21 O
ATOM 6 C5' C A 559 -6.691 99.255 123.660 1.00 68.86 C
ATOM 7 C4' C A 559 -8.195 99.296 123.515 1.00 70.92 C
ATOM 8 O4' C A 559 -8.545 99.010 122.133 1.00 69.71 O
ATOM 9 C3' C A 559 -8.940 98.239 124.317 1.00 72.11 C
ATOM 10 O3' C A 559 -9.157 98.632 125.667 1.00 74.96 O
ATOM 11 C2' C A 559 -10.229 98.075 123.527 1.00 70.58 C
ATOM 12 O2' C A 559 -11.158 99.113 123.778 1.00 69.75 O
ATOM 13 C1' C A 559 -9.705 98.189 122.092 1.00 68.58 C
ATOM 14 N1 C A 559 -9.332 96.891 121.495 1.00 65.20 N
ATOM 15 C2 C A 559 -10.337 96.082 120.939 1.00 65.18 C
ATOM 16 O2 C A 559 -11.517 96.467 120.986 1.00 65.52 O
ATOM 17 N3 C A 559 -9.994 94.900 120.369 1.00 63.28 N
ATOM 18 C4 C A 559 -8.713 94.516 120.346 1.00 62.47 C
ATOM 19 N4 C A 559 -8.417 93.347 119.766 1.00 60.29 N
ATOM 20 C5 C A 559 -7.677 95.314 120.915 1.00 62.00 C
ATOM 21 C6 C A 559 -8.027 96.479 121.473 1.00 63.24 C
ATOM 22 P G A 560 -8.957 97.559 126.845 1.00 78.09 P
ATOM 23 OP1 G A 560 -9.275 98.257 128.117 1.00 78.31 O
ATOM 24 OP2 G A 560 -7.626 96.918 126.673 1.00 77.72 O
ATOM 25 O5' G A 560 -10.085 96.466 126.566 1.00 78.46 O
TER
ATOM 1 O3' C B 573 -11.012 84.029 116.387 1.00 64.18 O
ATOM 2 P C B 574 -11.094 84.871 115.016 1.00 64.32 P
ATOM 3 OP1 C B 574 -12.194 84.305 114.191 1.00 64.06 O
ATOM 4 OP2 C B 574 -9.723 84.940 114.457 1.00 65.74 O
ATOM 5 O5' C B 574 -11.539 86.331 115.469 1.00 62.15 O
ATOM 6 C5' C B 574 -12.892 86.596 115.851 1.00 62.05 C
ATOM 7 C4' C B 574 -13.012 87.991 116.402 1.00 63.40 C
ATOM 8 O4' C B 574 -12.098 88.139 117.519 1.00 64.41 O
ATOM 9 C3' C B 574 -12.612 89.106 115.455 1.00 64.42 C
ATOM 10 O3' C B 574 -13.683 89.446 114.584 1.00 65.10 O
ATOM 11 C2' C B 574 -12.271 90.238 116.415 1.00 65.54 C
ATOM 12 O2' C B 574 -13.418 90.899 116.915 1.00 66.53 O
ATOM 13 C1' C B 574 -11.599 89.468 117.555 1.00 65.59 C
ATOM 14 N1 C B 574 -10.121 89.430 117.472 1.00 66.56 N
ATOM 15 C2 C B 574 -9.383 90.524 117.973 1.00 66.85 C
ATOM 16 O2 C B 574 -9.990 91.498 118.456 1.00 65.72 O
ATOM 17 N3 C B 574 -8.028 90.488 117.912 1.00 67.03 N
ATOM 18 C4 C B 574 -7.409 89.429 117.375 1.00 66.54 C
ATOM 19 N4 C B 574 -6.075 89.440 117.334 1.00 65.83 N
ATOM 20 C5 C B 574 -8.132 88.312 116.857 1.00 65.66 C
ATOM 21 C6 C B 574 -9.470 88.354 116.925 1.00 66.50 C
ATOM 22 P A B 575 -13.367 89.957 113.095 1.00 65.52 P
ATOM 23 OP1 A B 575 -12.664 91.264 113.200 1.00 66.05 O
ATOM 24 OP2 A B 575 -14.629 89.872 112.315 1.00 66.42 O
ATOM 25 O5' A B 575 -12.352 88.864 112.523 1.00 64.39 O
TER
ATOM 2 P C A 559 -4.655 97.650 123.147 1.00 66.98 P
ATOM 3 OP1 C A 559 -3.918 98.166 124.331 1.00 66.78 O
ATOM 4 OP2 C A 559 -4.491 96.226 122.741 1.00 63.66 O
ATOM 5 O5' C A 559 -6.206 97.930 123.372 1.00 67.21 O
ATOM 6 C5' C A 559 -6.691 99.255 123.660 1.00 68.86 C
ATOM 7 C4' C A 559 -8.195 99.296 123.515 1.00 70.92 C
ATOM 8 O4' C A 559 -8.545 99.010 122.133 1.00 69.71 O
ATOM 9 C3' C A 559 -8.940 98.239 124.317 1.00 72.11 C
ATOM 10 O3' C A 559 -9.157 98.632 125.667 1.00 74.96 O
ATOM 11 C2' C A 559 -10.229 98.075 123.527 1.00 70.58 C
ATOM 12 O2' C A 559 -11.158 99.113 123.778 1.00 69.75 O
ATOM 13 C1' C A 559 -9.705 98.189 122.092 1.00 68.58 C
ATOM 14 N1 C A 559 -9.332 96.891 121.495 1.00 65.20 N
ATOM 15 C2 C A 559 -10.337 96.082 120.939 1.00 65.18 C
ATOM 16 O2 C A 559 -11.517 96.467 120.986 1.00 65.52 O
ATOM 17 N3 C A 559 -9.994 94.900 120.369 1.00 63.28 N
ATOM 18 C4 C A 559 -8.713 94.516 120.346 1.00 62.47 C
ATOM 19 N4 C A 559 -8.417 93.347 119.766 1.00 60.29 N
ATOM 20 C5 C A 559 -7.677 95.314 120.915 1.00 62.00 C
ATOM 21 C6 C A 559 -8.027 96.479 121.473 1.00 63.24 C
ATOM 22 P G A 560 -8.957 97.559 126.845 1.00 78.09 P
ATOM 23 OP1 G A 560 -9.275 98.257 128.117 1.00 78.31 O
ATOM 24 OP2 G A 560 -7.626 96.918 126.673 1.00 77.72 O
ATOM 25 O5' G A 560 -10.085 96.466 126.566 1.00 78.46 O
TER
ATOM 1 O3' C B 573 -11.012 84.029 116.387 1.00 64.18 O
ATOM 2 P C B 574 -11.094 84.871 115.016 1.00 64.32 P
ATOM 3 OP1 C B 574 -12.194 84.305 114.191 1.00 64.06 O
ATOM 4 OP2 C B 574 -9.723 84.940 114.457 1.00 65.74 O
ATOM 5 O5' C B 574 -11.539 86.331 115.469 1.00 62.15 O
ATOM 6 C5' C B 574 -12.892 86.596 115.851 1.00 62.05 C
ATOM 7 C4' C B 574 -13.012 87.991 116.402 1.00 63.40 C
ATOM 8 O4' C B 574 -12.098 88.139 117.519 1.00 64.41 O
ATOM 9 C3' C B 574 -12.612 89.106 115.455 1.00 64.42 C
ATOM 10 O3' C B 574 -13.683 89.446 114.584 1.00 65.10 O
ATOM 11 C2' C B 574 -12.271 90.238 116.415 1.00 65.54 C
ATOM 12 O2' C B 574 -13.418 90.899 116.915 1.00 66.53 O
ATOM 13 C1' C B 574 -11.599 89.468 117.555 1.00 65.59 C
ATOM 14 N1 C B 574 -10.121 89.430 117.472 1.00 66.56 N
ATOM 15 C2 C B 574 -9.383 90.524 117.973 1.00 66.85 C
ATOM 16 O2 C B 574 -9.990 91.498 118.456 1.00 65.72 O
ATOM 17 N3 C B 574 -8.028 90.488 117.912 1.00 67.03 N
ATOM 18 C4 C B 574 -7.409 89.429 117.375 1.00 66.54 C
ATOM 19 N4 C B 574 -6.075 89.440 117.334 1.00 65.83 N
ATOM 20 C5 C B 574 -8.132 88.312 116.857 1.00 65.66 C
ATOM 21 C6 C B 574 -9.470 88.354 116.925 1.00 66.50 C
ATOM 22 P A B 575 -13.367 89.957 113.095 1.00 65.52 P
ATOM 23 OP1 A B 575 -12.664 91.264 113.200 1.00 66.05 O
ATOM 24 OP2 A B 575 -14.629 89.872 112.315 1.00 66.42 O
ATOM 25 O5' A B 575 -12.352 88.864 112.523 1.00 64.39 O
TER
Atoms:
C2: (-10.337,96.082,120.939)
OP1: (-3.918,98.166,124.331)
OP2: (-4.491,96.226,122.741)
C4: (-8.713,94.516,120.346)
O5': (-6.206,97.930,123.372)
C3': (-8.940,98.239,124.317)
C1': (-9.705,98.189,122.092)
O4': (-8.545,99.010,122.133)
C5': (-6.691,99.255,123.660)
P: (-4.655,97.650,123.147)
O2: (-11.517,96.467,120.986)
C4': (-8.195,99.296,123.515)
C2': (-10.229,98.075,123.527)
O2': (-11.158,99.113,123.778)
N1: (-9.332,96.891,121.495)
N3: (-9.994,94.900,120.369)
N4: (-8.417,93.347,119.766)
C6: (-8.027,96.479,121.473)
C5: (-7.677,95.314,120.915)
O3': (-9.157,98.632,125.667)
OP1: (-3.918,98.166,124.331)
OP2: (-4.491,96.226,122.741)
C4: (-8.713,94.516,120.346)
O5': (-6.206,97.930,123.372)
C3': (-8.940,98.239,124.317)
C1': (-9.705,98.189,122.092)
O4': (-8.545,99.010,122.133)
C5': (-6.691,99.255,123.660)
P: (-4.655,97.650,123.147)
O2: (-11.517,96.467,120.986)
C4': (-8.195,99.296,123.515)
C2': (-10.229,98.075,123.527)
O2': (-11.158,99.113,123.778)
N1: (-9.332,96.891,121.495)
N3: (-9.994,94.900,120.369)
N4: (-8.417,93.347,119.766)
C6: (-8.027,96.479,121.473)
C5: (-7.677,95.314,120.915)
O3': (-9.157,98.632,125.667)
C2: (-9.383,90.524,117.973)
OP1: (-12.194,84.305,114.191)
OP2: (-9.723,84.940,114.457)
C4: (-7.409,89.429,117.375)
O5': (-11.539,86.331,115.469)
C3': (-12.612,89.106,115.455)
C1': (-11.599,89.468,117.555)
O4': (-12.098,88.139,117.519)
C5': (-12.892,86.596,115.851)
P: (-11.094,84.871,115.016)
O2: (-9.990,91.498,118.456)
C4': (-13.012,87.991,116.402)
C2': (-12.271,90.238,116.415)
O2': (-13.418,90.899,116.915)
N1: (-10.121,89.430,117.472)
N3: (-8.028,90.488,117.912)
N4: (-6.075,89.440,117.334)
C6: (-9.470,88.354,116.925)
C5: (-8.132,88.312,116.857)
O3': (-13.683,89.446,114.584)
OP1: (-12.194,84.305,114.191)
OP2: (-9.723,84.940,114.457)
C4: (-7.409,89.429,117.375)
O5': (-11.539,86.331,115.469)
C3': (-12.612,89.106,115.455)
C1': (-11.599,89.468,117.555)
O4': (-12.098,88.139,117.519)
C5': (-12.892,86.596,115.851)
P: (-11.094,84.871,115.016)
O2: (-9.990,91.498,118.456)
C4': (-13.012,87.991,116.402)
C2': (-12.271,90.238,116.415)
O2': (-13.418,90.899,116.915)
N1: (-10.121,89.430,117.472)
N3: (-8.028,90.488,117.912)
N4: (-6.075,89.440,117.334)
C6: (-9.470,88.354,116.925)
C5: (-8.132,88.312,116.857)
O3': (-13.683,89.446,114.584)
Image (generated by PyMOL):