Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02078:02107
Extra
PDB:
ATOM 1 O3' G A2077 107.032 105.421 33.461 1.00 52.56 O
ATOM 2 P C A2078 108.460 105.806 32.815 1.00 53.11 P
ATOM 3 OP1 C A2078 108.311 105.659 31.344 1.00 52.12 O
ATOM 4 OP2 C A2078 109.517 105.045 33.529 1.00 51.47 O
ATOM 5 O5' C A2078 108.634 107.355 33.145 1.00 51.89 O
ATOM 6 C5' C A2078 107.729 108.325 32.581 1.00 52.45 C
ATOM 7 C4' C A2078 107.923 109.677 33.225 1.00 52.26 C
ATOM 8 O4' C A2078 107.635 109.597 34.643 1.00 52.01 O
ATOM 9 C3' C A2078 109.324 110.259 33.162 1.00 52.52 C
ATOM 10 O3' C A2078 109.526 110.870 31.895 1.00 54.45 O
ATOM 11 C2' C A2078 109.303 111.263 34.309 1.00 51.80 C
ATOM 12 O2' C A2078 108.624 112.459 33.979 1.00 52.31 O
ATOM 13 C1' C A2078 108.460 110.515 35.345 1.00 51.07 C
ATOM 14 N1 C A2078 109.233 109.775 36.361 1.00 49.63 N
ATOM 15 C2 C A2078 109.601 110.437 37.544 1.00 49.17 C
ATOM 16 O2 C A2078 109.283 111.635 37.695 1.00 50.17 O
ATOM 17 N3 C A2078 110.289 109.756 38.491 1.00 48.12 N
ATOM 18 C4 C A2078 110.611 108.474 38.292 1.00 47.67 C
ATOM 19 N4 C A2078 111.284 107.841 39.256 1.00 48.57 N
ATOM 20 C5 C A2078 110.257 107.784 37.099 1.00 46.98 C
ATOM 21 C6 C A2078 109.579 108.464 36.168 1.00 48.34 C
ATOM 22 P U A2079 111.001 110.950 31.255 1.00 57.40 P
ATOM 23 OP1 U A2079 111.715 112.082 31.902 1.00 56.92 O
ATOM 24 OP2 U A2079 110.860 110.919 29.772 1.00 55.44 O
ATOM 25 O5' U A2079 111.724 109.604 31.689 1.00 55.36 O
TER
ATOM 1 O3' A B2106 112.812 113.847 47.619 1.00 50.11 O
ATOM 2 P C B2107 111.250 113.491 47.687 1.00 50.82 P
ATOM 3 OP1 C B2107 110.845 113.708 49.099 1.00 50.41 O
ATOM 4 OP2 C B2107 111.036 112.161 47.049 1.00 50.16 O
ATOM 5 O5' C B2107 110.560 114.587 46.763 1.00 47.64 O
ATOM 6 C5' C B2107 110.596 115.977 47.115 1.00 45.14 C
ATOM 7 C4' C B2107 110.035 116.800 45.988 1.00 44.02 C
ATOM 8 O4' C B2107 110.827 116.562 44.799 1.00 43.74 O
ATOM 9 C3' C B2107 108.625 116.431 45.556 1.00 43.84 C
ATOM 10 O3' C B2107 107.647 117.053 46.377 1.00 43.37 O
ATOM 11 C2' C B2107 108.579 116.959 44.131 1.00 42.27 C
ATOM 12 O2' C B2107 108.376 118.353 44.084 1.00 41.91 O
ATOM 13 C1' C B2107 109.996 116.637 43.651 1.00 41.45 C
ATOM 14 N1 C B2107 110.086 115.367 42.907 1.00 37.78 N
ATOM 15 C2 C B2107 109.595 115.326 41.597 1.00 37.35 C
ATOM 16 O2 C B2107 109.118 116.364 41.101 1.00 37.77 O
ATOM 17 N3 C B2107 109.652 114.166 40.903 1.00 37.13 N
ATOM 18 C4 C B2107 110.180 113.076 41.468 1.00 37.95 C
ATOM 19 N4 C B2107 110.206 111.943 40.748 1.00 37.10 N
ATOM 20 C5 C B2107 110.701 113.094 42.798 1.00 37.34 C
ATOM 21 C6 C B2107 110.631 114.248 43.474 1.00 36.97 C
ATOM 22 P C B2108 106.397 116.203 46.909 1.00 43.97 P
ATOM 23 OP1 C B2108 105.592 117.142 47.731 1.00 43.63 O
ATOM 24 OP2 C B2108 106.904 114.940 47.514 1.00 42.50 O
ATOM 25 O5' C B2108 105.572 115.864 45.590 1.00 41.88 O
TER
ATOM 2 P C A2078 108.460 105.806 32.815 1.00 53.11 P
ATOM 3 OP1 C A2078 108.311 105.659 31.344 1.00 52.12 O
ATOM 4 OP2 C A2078 109.517 105.045 33.529 1.00 51.47 O
ATOM 5 O5' C A2078 108.634 107.355 33.145 1.00 51.89 O
ATOM 6 C5' C A2078 107.729 108.325 32.581 1.00 52.45 C
ATOM 7 C4' C A2078 107.923 109.677 33.225 1.00 52.26 C
ATOM 8 O4' C A2078 107.635 109.597 34.643 1.00 52.01 O
ATOM 9 C3' C A2078 109.324 110.259 33.162 1.00 52.52 C
ATOM 10 O3' C A2078 109.526 110.870 31.895 1.00 54.45 O
ATOM 11 C2' C A2078 109.303 111.263 34.309 1.00 51.80 C
ATOM 12 O2' C A2078 108.624 112.459 33.979 1.00 52.31 O
ATOM 13 C1' C A2078 108.460 110.515 35.345 1.00 51.07 C
ATOM 14 N1 C A2078 109.233 109.775 36.361 1.00 49.63 N
ATOM 15 C2 C A2078 109.601 110.437 37.544 1.00 49.17 C
ATOM 16 O2 C A2078 109.283 111.635 37.695 1.00 50.17 O
ATOM 17 N3 C A2078 110.289 109.756 38.491 1.00 48.12 N
ATOM 18 C4 C A2078 110.611 108.474 38.292 1.00 47.67 C
ATOM 19 N4 C A2078 111.284 107.841 39.256 1.00 48.57 N
ATOM 20 C5 C A2078 110.257 107.784 37.099 1.00 46.98 C
ATOM 21 C6 C A2078 109.579 108.464 36.168 1.00 48.34 C
ATOM 22 P U A2079 111.001 110.950 31.255 1.00 57.40 P
ATOM 23 OP1 U A2079 111.715 112.082 31.902 1.00 56.92 O
ATOM 24 OP2 U A2079 110.860 110.919 29.772 1.00 55.44 O
ATOM 25 O5' U A2079 111.724 109.604 31.689 1.00 55.36 O
TER
ATOM 1 O3' A B2106 112.812 113.847 47.619 1.00 50.11 O
ATOM 2 P C B2107 111.250 113.491 47.687 1.00 50.82 P
ATOM 3 OP1 C B2107 110.845 113.708 49.099 1.00 50.41 O
ATOM 4 OP2 C B2107 111.036 112.161 47.049 1.00 50.16 O
ATOM 5 O5' C B2107 110.560 114.587 46.763 1.00 47.64 O
ATOM 6 C5' C B2107 110.596 115.977 47.115 1.00 45.14 C
ATOM 7 C4' C B2107 110.035 116.800 45.988 1.00 44.02 C
ATOM 8 O4' C B2107 110.827 116.562 44.799 1.00 43.74 O
ATOM 9 C3' C B2107 108.625 116.431 45.556 1.00 43.84 C
ATOM 10 O3' C B2107 107.647 117.053 46.377 1.00 43.37 O
ATOM 11 C2' C B2107 108.579 116.959 44.131 1.00 42.27 C
ATOM 12 O2' C B2107 108.376 118.353 44.084 1.00 41.91 O
ATOM 13 C1' C B2107 109.996 116.637 43.651 1.00 41.45 C
ATOM 14 N1 C B2107 110.086 115.367 42.907 1.00 37.78 N
ATOM 15 C2 C B2107 109.595 115.326 41.597 1.00 37.35 C
ATOM 16 O2 C B2107 109.118 116.364 41.101 1.00 37.77 O
ATOM 17 N3 C B2107 109.652 114.166 40.903 1.00 37.13 N
ATOM 18 C4 C B2107 110.180 113.076 41.468 1.00 37.95 C
ATOM 19 N4 C B2107 110.206 111.943 40.748 1.00 37.10 N
ATOM 20 C5 C B2107 110.701 113.094 42.798 1.00 37.34 C
ATOM 21 C6 C B2107 110.631 114.248 43.474 1.00 36.97 C
ATOM 22 P C B2108 106.397 116.203 46.909 1.00 43.97 P
ATOM 23 OP1 C B2108 105.592 117.142 47.731 1.00 43.63 O
ATOM 24 OP2 C B2108 106.904 114.940 47.514 1.00 42.50 O
ATOM 25 O5' C B2108 105.572 115.864 45.590 1.00 41.88 O
TER
Atoms:
C2: (109.601,110.437,37.544)
OP1: (108.311,105.659,31.344)
OP2: (109.517,105.045,33.529)
C4: (110.611,108.474,38.292)
O5': (108.634,107.355,33.145)
C3': (109.324,110.259,33.162)
C1': (108.460,110.515,35.345)
O4': (107.635,109.597,34.643)
C5': (107.729,108.325,32.581)
P: (108.460,105.806,32.815)
O2: (109.283,111.635,37.695)
C4': (107.923,109.677,33.225)
C2': (109.303,111.263,34.309)
O2': (108.624,112.459,33.979)
N1: (109.233,109.775,36.361)
N3: (110.289,109.756,38.491)
N4: (111.284,107.841,39.256)
C6: (109.579,108.464,36.168)
C5: (110.257,107.784,37.099)
O3': (109.526,110.870,31.895)
OP1: (108.311,105.659,31.344)
OP2: (109.517,105.045,33.529)
C4: (110.611,108.474,38.292)
O5': (108.634,107.355,33.145)
C3': (109.324,110.259,33.162)
C1': (108.460,110.515,35.345)
O4': (107.635,109.597,34.643)
C5': (107.729,108.325,32.581)
P: (108.460,105.806,32.815)
O2: (109.283,111.635,37.695)
C4': (107.923,109.677,33.225)
C2': (109.303,111.263,34.309)
O2': (108.624,112.459,33.979)
N1: (109.233,109.775,36.361)
N3: (110.289,109.756,38.491)
N4: (111.284,107.841,39.256)
C6: (109.579,108.464,36.168)
C5: (110.257,107.784,37.099)
O3': (109.526,110.870,31.895)
C2: (109.595,115.326,41.597)
OP1: (110.845,113.708,49.099)
OP2: (111.036,112.161,47.049)
C4: (110.180,113.076,41.468)
O5': (110.560,114.587,46.763)
C3': (108.625,116.431,45.556)
C1': (109.996,116.637,43.651)
O4': (110.827,116.562,44.799)
C5': (110.596,115.977,47.115)
P: (111.250,113.491,47.687)
O2: (109.118,116.364,41.101)
C4': (110.035,116.800,45.988)
C2': (108.579,116.959,44.131)
O2': (108.376,118.353,44.084)
N1: (110.086,115.367,42.907)
N3: (109.652,114.166,40.903)
N4: (110.206,111.943,40.748)
C6: (110.631,114.248,43.474)
C5: (110.701,113.094,42.798)
O3': (107.647,117.053,46.377)
OP1: (110.845,113.708,49.099)
OP2: (111.036,112.161,47.049)
C4: (110.180,113.076,41.468)
O5': (110.560,114.587,46.763)
C3': (108.625,116.431,45.556)
C1': (109.996,116.637,43.651)
O4': (110.827,116.562,44.799)
C5': (110.596,115.977,47.115)
P: (111.250,113.491,47.687)
O2: (109.118,116.364,41.101)
C4': (110.035,116.800,45.988)
C2': (108.579,116.959,44.131)
O2': (108.376,118.353,44.084)
N1: (110.086,115.367,42.907)
N3: (109.652,114.166,40.903)
N4: (110.206,111.943,40.748)
C6: (110.631,114.248,43.474)
C5: (110.701,113.094,42.798)
O3': (107.647,117.053,46.377)
Image (generated by PyMOL):