Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01040:01028
Extra
PDB:
ATOM 1 O3' C A1039 37.449 106.337 103.170 1.00 54.91 O
ATOM 2 P A A1040 38.106 107.050 101.890 1.00 56.54 P
ATOM 3 OP1 A A1040 39.364 107.734 102.298 1.00 56.83 O
ATOM 4 OP2 A A1040 37.052 107.813 101.168 1.00 55.98 O
ATOM 5 O5' A A1040 38.530 105.801 100.995 1.00 50.64 O
ATOM 6 C5' A A1040 38.748 104.512 101.593 1.00 39.19 C
ATOM 7 C4' A A1040 38.714 103.445 100.539 1.00 36.90 C
ATOM 8 O4' A A1040 39.740 103.716 99.561 1.00 34.69 O
ATOM 9 C3' A A1040 39.010 102.040 101.024 1.00 37.85 C
ATOM 10 O3' A A1040 37.810 101.440 101.500 1.00 40.11 O
ATOM 11 C2' A A1040 39.498 101.358 99.752 1.00 37.25 C
ATOM 12 O2' A A1040 38.441 100.980 98.898 1.00 39.40 O
ATOM 13 C1' A A1040 40.258 102.497 99.068 1.00 35.31 C
ATOM 14 N9 A A1040 41.713 102.494 99.248 1.00 33.61 N
ATOM 15 C8 A A1040 42.459 103.079 100.242 1.00 31.01 C
ATOM 16 N7 A A1040 43.749 102.925 100.091 1.00 31.88 N
ATOM 17 C5 A A1040 43.864 102.178 98.924 1.00 32.38 C
ATOM 18 C6 A A1040 44.979 101.666 98.216 1.00 32.81 C
ATOM 19 N6 A A1040 46.249 101.826 98.599 1.00 29.46 N
ATOM 20 N1 A A1040 44.736 100.963 97.088 1.00 33.02 N
ATOM 21 C2 A A1040 43.472 100.777 96.711 1.00 30.39 C
ATOM 22 N3 A A1040 42.354 101.195 97.288 1.00 31.75 N
ATOM 23 C4 A A1040 42.619 101.899 98.401 1.00 31.67 C
ATOM 24 P A A1041 37.633 101.106 103.063 1.00 39.55 P
ATOM 25 OP1 A A1041 36.205 101.384 103.362 1.00 40.11 O
ATOM 26 OP2 A A1041 38.695 101.761 103.870 1.00 41.24 O
ATOM 27 O5' A A1041 37.859 99.535 103.136 1.00 38.90 O
TER
ATOM 1 O3' C B1027 35.400 94.625 97.269 1.00 31.23 O
ATOM 2 P C B1028 35.304 95.630 96.036 1.00 32.20 P
ATOM 3 OP1 C B1028 34.092 96.455 96.239 1.00 31.88 O
ATOM 4 OP2 C B1028 35.454 94.837 94.788 1.00 29.57 O
ATOM 5 O5' C B1028 36.586 96.556 96.219 1.00 31.19 O
ATOM 6 C5' C B1028 36.622 97.570 97.239 1.00 30.85 C
ATOM 7 C4' C B1028 37.894 98.376 97.133 1.00 32.32 C
ATOM 8 O4' C B1028 39.042 97.554 97.467 1.00 32.76 O
ATOM 9 C3' C B1028 38.228 98.917 95.750 1.00 31.26 C
ATOM 10 O3' C B1028 37.544 100.122 95.483 1.00 31.63 O
ATOM 11 C2' C B1028 39.713 99.175 95.871 1.00 30.76 C
ATOM 12 O2' C B1028 39.932 100.336 96.644 1.00 30.25 O
ATOM 13 C1' C B1028 40.151 97.958 96.679 1.00 31.14 C
ATOM 14 N1 C B1028 40.560 96.825 95.834 1.00 31.87 N
ATOM 15 C2 C B1028 41.867 96.790 95.346 1.00 32.93 C
ATOM 16 O2 C B1028 42.621 97.755 95.579 1.00 35.32 O
ATOM 17 N3 C B1028 42.276 95.712 94.629 1.00 30.80 N
ATOM 18 C4 C B1028 41.424 94.714 94.380 1.00 30.20 C
ATOM 19 N4 C B1028 41.863 93.665 93.683 1.00 26.86 N
ATOM 20 C5 C B1028 40.081 94.745 94.837 1.00 30.35 C
ATOM 21 C6 C B1028 39.691 95.809 95.549 1.00 30.46 C
ATOM 22 P A B1029 37.189 100.504 93.975 1.00 32.63 P
ATOM 23 OP1 A B1029 36.648 101.881 93.991 1.00 29.88 O
ATOM 24 OP2 A B1029 36.372 99.407 93.413 1.00 31.69 O
ATOM 25 O5' A B1029 38.606 100.495 93.240 1.00 33.97 O
TER
ATOM 2 P A A1040 38.106 107.050 101.890 1.00 56.54 P
ATOM 3 OP1 A A1040 39.364 107.734 102.298 1.00 56.83 O
ATOM 4 OP2 A A1040 37.052 107.813 101.168 1.00 55.98 O
ATOM 5 O5' A A1040 38.530 105.801 100.995 1.00 50.64 O
ATOM 6 C5' A A1040 38.748 104.512 101.593 1.00 39.19 C
ATOM 7 C4' A A1040 38.714 103.445 100.539 1.00 36.90 C
ATOM 8 O4' A A1040 39.740 103.716 99.561 1.00 34.69 O
ATOM 9 C3' A A1040 39.010 102.040 101.024 1.00 37.85 C
ATOM 10 O3' A A1040 37.810 101.440 101.500 1.00 40.11 O
ATOM 11 C2' A A1040 39.498 101.358 99.752 1.00 37.25 C
ATOM 12 O2' A A1040 38.441 100.980 98.898 1.00 39.40 O
ATOM 13 C1' A A1040 40.258 102.497 99.068 1.00 35.31 C
ATOM 14 N9 A A1040 41.713 102.494 99.248 1.00 33.61 N
ATOM 15 C8 A A1040 42.459 103.079 100.242 1.00 31.01 C
ATOM 16 N7 A A1040 43.749 102.925 100.091 1.00 31.88 N
ATOM 17 C5 A A1040 43.864 102.178 98.924 1.00 32.38 C
ATOM 18 C6 A A1040 44.979 101.666 98.216 1.00 32.81 C
ATOM 19 N6 A A1040 46.249 101.826 98.599 1.00 29.46 N
ATOM 20 N1 A A1040 44.736 100.963 97.088 1.00 33.02 N
ATOM 21 C2 A A1040 43.472 100.777 96.711 1.00 30.39 C
ATOM 22 N3 A A1040 42.354 101.195 97.288 1.00 31.75 N
ATOM 23 C4 A A1040 42.619 101.899 98.401 1.00 31.67 C
ATOM 24 P A A1041 37.633 101.106 103.063 1.00 39.55 P
ATOM 25 OP1 A A1041 36.205 101.384 103.362 1.00 40.11 O
ATOM 26 OP2 A A1041 38.695 101.761 103.870 1.00 41.24 O
ATOM 27 O5' A A1041 37.859 99.535 103.136 1.00 38.90 O
TER
ATOM 1 O3' C B1027 35.400 94.625 97.269 1.00 31.23 O
ATOM 2 P C B1028 35.304 95.630 96.036 1.00 32.20 P
ATOM 3 OP1 C B1028 34.092 96.455 96.239 1.00 31.88 O
ATOM 4 OP2 C B1028 35.454 94.837 94.788 1.00 29.57 O
ATOM 5 O5' C B1028 36.586 96.556 96.219 1.00 31.19 O
ATOM 6 C5' C B1028 36.622 97.570 97.239 1.00 30.85 C
ATOM 7 C4' C B1028 37.894 98.376 97.133 1.00 32.32 C
ATOM 8 O4' C B1028 39.042 97.554 97.467 1.00 32.76 O
ATOM 9 C3' C B1028 38.228 98.917 95.750 1.00 31.26 C
ATOM 10 O3' C B1028 37.544 100.122 95.483 1.00 31.63 O
ATOM 11 C2' C B1028 39.713 99.175 95.871 1.00 30.76 C
ATOM 12 O2' C B1028 39.932 100.336 96.644 1.00 30.25 O
ATOM 13 C1' C B1028 40.151 97.958 96.679 1.00 31.14 C
ATOM 14 N1 C B1028 40.560 96.825 95.834 1.00 31.87 N
ATOM 15 C2 C B1028 41.867 96.790 95.346 1.00 32.93 C
ATOM 16 O2 C B1028 42.621 97.755 95.579 1.00 35.32 O
ATOM 17 N3 C B1028 42.276 95.712 94.629 1.00 30.80 N
ATOM 18 C4 C B1028 41.424 94.714 94.380 1.00 30.20 C
ATOM 19 N4 C B1028 41.863 93.665 93.683 1.00 26.86 N
ATOM 20 C5 C B1028 40.081 94.745 94.837 1.00 30.35 C
ATOM 21 C6 C B1028 39.691 95.809 95.549 1.00 30.46 C
ATOM 22 P A B1029 37.189 100.504 93.975 1.00 32.63 P
ATOM 23 OP1 A B1029 36.648 101.881 93.991 1.00 29.88 O
ATOM 24 OP2 A B1029 36.372 99.407 93.413 1.00 31.69 O
ATOM 25 O5' A B1029 38.606 100.495 93.240 1.00 33.97 O
TER
Atoms:
OP1: (39.364,107.734,102.298)
OP2: (37.052,107.813,101.168)
C3': (39.010,102.040,101.024)
C1': (40.258,102.497,99.068)
C5': (38.748,104.512,101.593)
O4': (39.740,103.716,99.561)
C8: (42.459,103.079,100.242)
O2': (38.441,100.980,98.898)
C6: (44.979,101.666,98.216)
C5: (43.864,102.178,98.924)
C4: (42.619,101.899,98.401)
P: (38.106,107.050,101.890)
C4': (38.714,103.445,100.539)
C2': (39.498,101.358,99.752)
C2: (43.472,100.777,96.711)
N1: (44.736,100.963,97.088)
N3: (42.354,101.195,97.288)
N6: (46.249,101.826,98.599)
N7: (43.749,102.925,100.091)
N9: (41.713,102.494,99.248)
O5': (38.530,105.801,100.995)
O3': (37.810,101.440,101.500)
OP2: (37.052,107.813,101.168)
C3': (39.010,102.040,101.024)
C1': (40.258,102.497,99.068)
C5': (38.748,104.512,101.593)
O4': (39.740,103.716,99.561)
C8: (42.459,103.079,100.242)
O2': (38.441,100.980,98.898)
C6: (44.979,101.666,98.216)
C5: (43.864,102.178,98.924)
C4: (42.619,101.899,98.401)
P: (38.106,107.050,101.890)
C4': (38.714,103.445,100.539)
C2': (39.498,101.358,99.752)
C2: (43.472,100.777,96.711)
N1: (44.736,100.963,97.088)
N3: (42.354,101.195,97.288)
N6: (46.249,101.826,98.599)
N7: (43.749,102.925,100.091)
N9: (41.713,102.494,99.248)
O5': (38.530,105.801,100.995)
O3': (37.810,101.440,101.500)
C2: (41.867,96.790,95.346)
OP1: (34.092,96.455,96.239)
OP2: (35.454,94.837,94.788)
C4: (41.424,94.714,94.380)
O5': (36.586,96.556,96.219)
C3': (38.228,98.917,95.750)
C1': (40.151,97.958,96.679)
O4': (39.042,97.554,97.467)
C5': (36.622,97.570,97.239)
P: (35.304,95.630,96.036)
O2: (42.621,97.755,95.579)
C4': (37.894,98.376,97.133)
C2': (39.713,99.175,95.871)
O2': (39.932,100.336,96.644)
N1: (40.560,96.825,95.834)
N3: (42.276,95.712,94.629)
N4: (41.863,93.665,93.683)
C6: (39.691,95.809,95.549)
C5: (40.081,94.745,94.837)
O3': (37.544,100.122,95.483)
OP1: (34.092,96.455,96.239)
OP2: (35.454,94.837,94.788)
C4: (41.424,94.714,94.380)
O5': (36.586,96.556,96.219)
C3': (38.228,98.917,95.750)
C1': (40.151,97.958,96.679)
O4': (39.042,97.554,97.467)
C5': (36.622,97.570,97.239)
P: (35.304,95.630,96.036)
O2: (42.621,97.755,95.579)
C4': (37.894,98.376,97.133)
C2': (39.713,99.175,95.871)
O2': (39.932,100.336,96.644)
N1: (40.560,96.825,95.834)
N3: (42.276,95.712,94.629)
N4: (41.863,93.665,93.683)
C6: (39.691,95.809,95.549)
C5: (40.081,94.745,94.837)
O3': (37.544,100.122,95.483)
Image (generated by PyMOL):