Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01142:01151
Extra
PDB:
ATOM 1 O3' C A1141 67.207 68.065 178.932 1.00119.56 O
ATOM 2 P C A1142 66.774 66.590 178.446 1.00118.23 P
ATOM 3 OP1 C A1142 67.635 66.176 177.303 1.00117.77 O
ATOM 4 OP2 C A1142 65.295 66.571 178.293 1.00117.86 O
ATOM 5 O5' C A1142 67.147 65.673 179.689 1.00116.94 O
ATOM 6 C5' C A1142 66.378 65.736 180.895 1.00114.87 C
ATOM 7 C4' C A1142 67.290 65.803 182.092 1.00113.87 C
ATOM 8 O4' C A1142 68.115 66.996 182.027 1.00112.87 O
ATOM 9 C3' C A1142 66.557 65.930 183.412 1.00113.70 C
ATOM 10 O3' C A1142 66.129 64.651 183.862 1.00114.68 O
ATOM 11 C2' C A1142 67.607 66.565 184.310 1.00112.82 C
ATOM 12 O2' C A1142 68.561 65.639 184.786 1.00112.53 O
ATOM 13 C1' C A1142 68.293 67.527 183.335 1.00112.37 C
ATOM 14 N1 C A1142 67.768 68.912 183.362 1.00111.62 N
ATOM 15 C2 C A1142 67.724 69.616 184.584 1.00110.41 C
ATOM 16 O2 C A1142 68.117 69.061 185.620 1.00109.60 O
ATOM 17 N3 C A1142 67.253 70.884 184.598 1.00109.87 N
ATOM 18 C4 C A1142 66.836 71.455 183.465 1.00110.15 C
ATOM 19 N4 C A1142 66.380 72.710 183.524 1.00109.55 N
ATOM 20 C5 C A1142 66.866 70.768 182.219 1.00110.82 C
ATOM 21 C6 C A1142 67.333 69.513 182.212 1.00111.59 C
ATOM 22 P C A1143 64.586 64.414 184.227 1.00114.84 P
ATOM 23 OP1 C A1143 64.390 62.961 184.472 1.00115.17 O
ATOM 24 OP2 C A1143 63.755 65.106 183.209 1.00115.21 O
ATOM 25 O5' C A1143 64.419 65.166 185.615 1.00114.45 O
TER
ATOM 1 O3' A B1150 64.135 74.096 178.860 1.00119.97 O
ATOM 2 P A B1151 64.713 73.175 180.041 1.00123.24 P
ATOM 3 OP1 A B1151 65.010 71.864 179.411 1.00122.94 O
ATOM 4 OP2 A B1151 63.798 73.233 181.215 1.00122.65 O
ATOM 5 O5' A B1151 66.099 73.862 180.440 1.00125.39 O
ATOM 6 C5' A B1151 66.140 75.103 181.188 1.00127.81 C
ATOM 7 C4' A B1151 67.543 75.688 181.177 1.00129.13 C
ATOM 8 O4' A B1151 68.436 74.870 181.991 1.00129.85 O
ATOM 9 C3' A B1151 68.207 75.792 179.805 1.00129.71 C
ATOM 10 O3' A B1151 69.065 76.931 179.761 1.00129.19 O
ATOM 11 C2' A B1151 69.049 74.523 179.759 1.00130.30 C
ATOM 12 O2' A B1151 70.131 74.607 178.858 1.00130.70 O
ATOM 13 C1' A B1151 69.535 74.445 181.205 1.00130.80 C
ATOM 14 N9 A B1151 69.960 73.115 181.656 1.00132.08 N
ATOM 15 C8 A B1151 70.236 72.000 180.896 1.00132.56 C
ATOM 16 N7 A B1151 70.617 70.961 181.597 1.00132.48 N
ATOM 17 C5 A B1151 70.586 71.415 182.908 1.00132.75 C
ATOM 18 C6 A B1151 70.883 70.790 184.129 1.00133.11 C
ATOM 19 N6 A B1151 71.282 69.523 184.233 1.00133.63 N
ATOM 20 N1 A B1151 70.755 71.522 185.256 1.00133.47 N
ATOM 21 C2 A B1151 70.353 72.795 185.151 1.00133.70 C
ATOM 22 N3 A B1151 70.041 73.494 184.062 1.00133.21 N
ATOM 23 C4 A B1151 70.181 72.738 182.960 1.00132.67 C
ATOM 24 P A B1152 69.248 77.745 178.385 1.00128.72 P
ATOM 25 OP1 A B1152 69.596 76.811 177.282 1.00128.05 O
ATOM 26 OP2 A B1152 70.148 78.880 178.689 1.00129.08 O
ATOM 27 O5' A B1152 67.800 78.345 178.108 1.00129.42 O
TER
ATOM 2 P C A1142 66.774 66.590 178.446 1.00118.23 P
ATOM 3 OP1 C A1142 67.635 66.176 177.303 1.00117.77 O
ATOM 4 OP2 C A1142 65.295 66.571 178.293 1.00117.86 O
ATOM 5 O5' C A1142 67.147 65.673 179.689 1.00116.94 O
ATOM 6 C5' C A1142 66.378 65.736 180.895 1.00114.87 C
ATOM 7 C4' C A1142 67.290 65.803 182.092 1.00113.87 C
ATOM 8 O4' C A1142 68.115 66.996 182.027 1.00112.87 O
ATOM 9 C3' C A1142 66.557 65.930 183.412 1.00113.70 C
ATOM 10 O3' C A1142 66.129 64.651 183.862 1.00114.68 O
ATOM 11 C2' C A1142 67.607 66.565 184.310 1.00112.82 C
ATOM 12 O2' C A1142 68.561 65.639 184.786 1.00112.53 O
ATOM 13 C1' C A1142 68.293 67.527 183.335 1.00112.37 C
ATOM 14 N1 C A1142 67.768 68.912 183.362 1.00111.62 N
ATOM 15 C2 C A1142 67.724 69.616 184.584 1.00110.41 C
ATOM 16 O2 C A1142 68.117 69.061 185.620 1.00109.60 O
ATOM 17 N3 C A1142 67.253 70.884 184.598 1.00109.87 N
ATOM 18 C4 C A1142 66.836 71.455 183.465 1.00110.15 C
ATOM 19 N4 C A1142 66.380 72.710 183.524 1.00109.55 N
ATOM 20 C5 C A1142 66.866 70.768 182.219 1.00110.82 C
ATOM 21 C6 C A1142 67.333 69.513 182.212 1.00111.59 C
ATOM 22 P C A1143 64.586 64.414 184.227 1.00114.84 P
ATOM 23 OP1 C A1143 64.390 62.961 184.472 1.00115.17 O
ATOM 24 OP2 C A1143 63.755 65.106 183.209 1.00115.21 O
ATOM 25 O5' C A1143 64.419 65.166 185.615 1.00114.45 O
TER
ATOM 1 O3' A B1150 64.135 74.096 178.860 1.00119.97 O
ATOM 2 P A B1151 64.713 73.175 180.041 1.00123.24 P
ATOM 3 OP1 A B1151 65.010 71.864 179.411 1.00122.94 O
ATOM 4 OP2 A B1151 63.798 73.233 181.215 1.00122.65 O
ATOM 5 O5' A B1151 66.099 73.862 180.440 1.00125.39 O
ATOM 6 C5' A B1151 66.140 75.103 181.188 1.00127.81 C
ATOM 7 C4' A B1151 67.543 75.688 181.177 1.00129.13 C
ATOM 8 O4' A B1151 68.436 74.870 181.991 1.00129.85 O
ATOM 9 C3' A B1151 68.207 75.792 179.805 1.00129.71 C
ATOM 10 O3' A B1151 69.065 76.931 179.761 1.00129.19 O
ATOM 11 C2' A B1151 69.049 74.523 179.759 1.00130.30 C
ATOM 12 O2' A B1151 70.131 74.607 178.858 1.00130.70 O
ATOM 13 C1' A B1151 69.535 74.445 181.205 1.00130.80 C
ATOM 14 N9 A B1151 69.960 73.115 181.656 1.00132.08 N
ATOM 15 C8 A B1151 70.236 72.000 180.896 1.00132.56 C
ATOM 16 N7 A B1151 70.617 70.961 181.597 1.00132.48 N
ATOM 17 C5 A B1151 70.586 71.415 182.908 1.00132.75 C
ATOM 18 C6 A B1151 70.883 70.790 184.129 1.00133.11 C
ATOM 19 N6 A B1151 71.282 69.523 184.233 1.00133.63 N
ATOM 20 N1 A B1151 70.755 71.522 185.256 1.00133.47 N
ATOM 21 C2 A B1151 70.353 72.795 185.151 1.00133.70 C
ATOM 22 N3 A B1151 70.041 73.494 184.062 1.00133.21 N
ATOM 23 C4 A B1151 70.181 72.738 182.960 1.00132.67 C
ATOM 24 P A B1152 69.248 77.745 178.385 1.00128.72 P
ATOM 25 OP1 A B1152 69.596 76.811 177.282 1.00128.05 O
ATOM 26 OP2 A B1152 70.148 78.880 178.689 1.00129.08 O
ATOM 27 O5' A B1152 67.800 78.345 178.108 1.00129.42 O
TER
Atoms:
C2: (67.724,69.616,184.584)
OP1: (67.635,66.176,177.303)
OP2: (65.295,66.571,178.293)
C4: (66.836,71.455,183.465)
O5': (67.147,65.673,179.689)
C3': (66.557,65.930,183.412)
C1': (68.293,67.527,183.335)
O4': (68.115,66.996,182.027)
C5': (66.378,65.736,180.895)
P: (66.774,66.590,178.446)
O2: (68.117,69.061,185.620)
C4': (67.290,65.803,182.092)
C2': (67.607,66.565,184.310)
O2': (68.561,65.639,184.786)
N1: (67.768,68.912,183.362)
N3: (67.253,70.884,184.598)
N4: (66.380,72.710,183.524)
C6: (67.333,69.513,182.212)
C5: (66.866,70.768,182.219)
O3': (66.129,64.651,183.862)
OP1: (67.635,66.176,177.303)
OP2: (65.295,66.571,178.293)
C4: (66.836,71.455,183.465)
O5': (67.147,65.673,179.689)
C3': (66.557,65.930,183.412)
C1': (68.293,67.527,183.335)
O4': (68.115,66.996,182.027)
C5': (66.378,65.736,180.895)
P: (66.774,66.590,178.446)
O2: (68.117,69.061,185.620)
C4': (67.290,65.803,182.092)
C2': (67.607,66.565,184.310)
O2': (68.561,65.639,184.786)
N1: (67.768,68.912,183.362)
N3: (67.253,70.884,184.598)
N4: (66.380,72.710,183.524)
C6: (67.333,69.513,182.212)
C5: (66.866,70.768,182.219)
O3': (66.129,64.651,183.862)
OP1: (65.010,71.864,179.411)
OP2: (63.798,73.233,181.215)
C3': (68.207,75.792,179.805)
C1': (69.535,74.445,181.205)
C5': (66.140,75.103,181.188)
O4': (68.436,74.870,181.991)
C8: (70.236,72.000,180.896)
O2': (70.131,74.607,178.858)
C6: (70.883,70.790,184.129)
C5: (70.586,71.415,182.908)
C4: (70.181,72.738,182.960)
P: (64.713,73.175,180.041)
C4': (67.543,75.688,181.177)
C2': (69.049,74.523,179.759)
C2: (70.353,72.795,185.151)
N1: (70.755,71.522,185.256)
N3: (70.041,73.494,184.062)
N6: (71.282,69.523,184.233)
N7: (70.617,70.961,181.597)
N9: (69.960,73.115,181.656)
O5': (66.099,73.862,180.440)
O3': (69.065,76.931,179.761)
OP2: (63.798,73.233,181.215)
C3': (68.207,75.792,179.805)
C1': (69.535,74.445,181.205)
C5': (66.140,75.103,181.188)
O4': (68.436,74.870,181.991)
C8: (70.236,72.000,180.896)
O2': (70.131,74.607,178.858)
C6: (70.883,70.790,184.129)
C5: (70.586,71.415,182.908)
C4: (70.181,72.738,182.960)
P: (64.713,73.175,180.041)
C4': (67.543,75.688,181.177)
C2': (69.049,74.523,179.759)
C2: (70.353,72.795,185.151)
N1: (70.755,71.522,185.256)
N3: (70.041,73.494,184.062)
N6: (71.282,69.523,184.233)
N7: (70.617,70.961,181.597)
N9: (69.960,73.115,181.656)
O5': (66.099,73.862,180.440)
O3': (69.065,76.931,179.761)
Image (generated by PyMOL):