Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.862 79.414 67.840 1.00 45.16 O
ATOM 2 P C A1234 5.195 79.558 66.280 1.00 46.64 P
ATOM 3 OP1 C A1234 4.593 78.385 65.599 1.00 47.63 O
ATOM 4 OP2 C A1234 6.648 79.821 66.120 1.00 47.78 O
ATOM 5 O5' C A1234 4.392 80.867 65.858 1.00 44.28 O
ATOM 6 C5' C A1234 2.962 80.875 65.870 1.00 43.33 C
ATOM 7 C4' C A1234 2.435 82.244 65.516 1.00 44.97 C
ATOM 8 O4' C A1234 2.715 83.183 66.586 1.00 44.84 O
ATOM 9 C3' C A1234 3.038 82.904 64.290 1.00 45.64 C
ATOM 10 O3' C A1234 2.507 82.391 63.076 1.00 46.20 O
ATOM 11 C2' C A1234 2.684 84.364 64.527 1.00 46.63 C
ATOM 12 O2' C A1234 1.339 84.663 64.215 1.00 48.42 O
ATOM 13 C1' C A1234 2.907 84.480 66.039 1.00 47.05 C
ATOM 14 N1 C A1234 4.281 84.928 66.347 1.00 47.98 N
ATOM 15 C2 C A1234 4.545 86.302 66.416 1.00 48.49 C
ATOM 16 O2 C A1234 3.606 87.105 66.291 1.00 49.70 O
ATOM 17 N3 C A1234 5.816 86.718 66.621 1.00 49.41 N
ATOM 18 C4 C A1234 6.795 85.825 66.775 1.00 48.30 C
ATOM 19 N4 C A1234 8.034 86.279 66.962 1.00 49.37 N
ATOM 20 C5 C A1234 6.549 84.425 66.744 1.00 48.16 C
ATOM 21 C6 C A1234 5.292 84.024 66.532 1.00 48.35 C
ATOM 22 P U A1235 3.477 82.188 61.810 1.00 48.04 P
ATOM 23 OP1 U A1235 2.666 81.682 60.674 1.00 47.82 O
ATOM 24 OP2 U A1235 4.655 81.410 62.260 1.00 47.08 O
ATOM 25 O5' U A1235 3.954 83.674 61.473 1.00 47.71 O
TER
ATOM 1 O3' A B1239 7.803 98.100 66.261 1.00 80.56 O
ATOM 2 P C B1240 7.164 97.822 67.709 1.00 79.55 P
ATOM 3 OP1 C B1240 7.272 99.073 68.498 1.00 79.38 O
ATOM 4 OP2 C B1240 7.732 96.561 68.250 1.00 79.70 O
ATOM 5 O5' C B1240 5.622 97.567 67.417 1.00 77.10 O
ATOM 6 C5' C B1240 4.786 97.013 68.435 1.00 73.66 C
ATOM 7 C4' C B1240 3.458 96.598 67.864 1.00 71.25 C
ATOM 8 O4' C B1240 3.650 95.722 66.726 1.00 70.04 O
ATOM 9 C3' C B1240 2.645 95.774 68.838 1.00 70.51 C
ATOM 10 O3' C B1240 1.957 96.611 69.743 1.00 70.72 O
ATOM 11 C2' C B1240 1.734 94.967 67.927 1.00 69.83 C
ATOM 12 O2' C B1240 0.595 95.681 67.488 1.00 68.25 O
ATOM 13 C1' C B1240 2.675 94.687 66.752 1.00 69.75 C
ATOM 14 N1 C B1240 3.378 93.392 66.846 1.00 68.69 N
ATOM 15 C2 C B1240 2.646 92.205 66.676 1.00 68.55 C
ATOM 16 O2 C B1240 1.417 92.270 66.486 1.00 68.50 O
ATOM 17 N3 C B1240 3.297 91.020 66.726 1.00 68.32 N
ATOM 18 C4 C B1240 4.616 90.989 66.941 1.00 68.29 C
ATOM 19 N4 C B1240 5.217 89.798 66.971 1.00 68.31 N
ATOM 20 C5 C B1240 5.377 92.178 67.133 1.00 67.77 C
ATOM 21 C6 C B1240 4.726 93.343 67.081 1.00 67.54 C
ATOM 22 P U B1241 2.036 96.299 71.308 1.00 71.72 P
ATOM 23 OP1 U B1241 1.201 97.319 71.997 1.00 72.15 O
ATOM 24 OP2 U B1241 3.465 96.131 71.689 1.00 70.62 O
ATOM 25 O5' U B1241 1.316 94.885 71.428 1.00 70.21 O
TER
ATOM 2 P C A1234 5.195 79.558 66.280 1.00 46.64 P
ATOM 3 OP1 C A1234 4.593 78.385 65.599 1.00 47.63 O
ATOM 4 OP2 C A1234 6.648 79.821 66.120 1.00 47.78 O
ATOM 5 O5' C A1234 4.392 80.867 65.858 1.00 44.28 O
ATOM 6 C5' C A1234 2.962 80.875 65.870 1.00 43.33 C
ATOM 7 C4' C A1234 2.435 82.244 65.516 1.00 44.97 C
ATOM 8 O4' C A1234 2.715 83.183 66.586 1.00 44.84 O
ATOM 9 C3' C A1234 3.038 82.904 64.290 1.00 45.64 C
ATOM 10 O3' C A1234 2.507 82.391 63.076 1.00 46.20 O
ATOM 11 C2' C A1234 2.684 84.364 64.527 1.00 46.63 C
ATOM 12 O2' C A1234 1.339 84.663 64.215 1.00 48.42 O
ATOM 13 C1' C A1234 2.907 84.480 66.039 1.00 47.05 C
ATOM 14 N1 C A1234 4.281 84.928 66.347 1.00 47.98 N
ATOM 15 C2 C A1234 4.545 86.302 66.416 1.00 48.49 C
ATOM 16 O2 C A1234 3.606 87.105 66.291 1.00 49.70 O
ATOM 17 N3 C A1234 5.816 86.718 66.621 1.00 49.41 N
ATOM 18 C4 C A1234 6.795 85.825 66.775 1.00 48.30 C
ATOM 19 N4 C A1234 8.034 86.279 66.962 1.00 49.37 N
ATOM 20 C5 C A1234 6.549 84.425 66.744 1.00 48.16 C
ATOM 21 C6 C A1234 5.292 84.024 66.532 1.00 48.35 C
ATOM 22 P U A1235 3.477 82.188 61.810 1.00 48.04 P
ATOM 23 OP1 U A1235 2.666 81.682 60.674 1.00 47.82 O
ATOM 24 OP2 U A1235 4.655 81.410 62.260 1.00 47.08 O
ATOM 25 O5' U A1235 3.954 83.674 61.473 1.00 47.71 O
TER
ATOM 1 O3' A B1239 7.803 98.100 66.261 1.00 80.56 O
ATOM 2 P C B1240 7.164 97.822 67.709 1.00 79.55 P
ATOM 3 OP1 C B1240 7.272 99.073 68.498 1.00 79.38 O
ATOM 4 OP2 C B1240 7.732 96.561 68.250 1.00 79.70 O
ATOM 5 O5' C B1240 5.622 97.567 67.417 1.00 77.10 O
ATOM 6 C5' C B1240 4.786 97.013 68.435 1.00 73.66 C
ATOM 7 C4' C B1240 3.458 96.598 67.864 1.00 71.25 C
ATOM 8 O4' C B1240 3.650 95.722 66.726 1.00 70.04 O
ATOM 9 C3' C B1240 2.645 95.774 68.838 1.00 70.51 C
ATOM 10 O3' C B1240 1.957 96.611 69.743 1.00 70.72 O
ATOM 11 C2' C B1240 1.734 94.967 67.927 1.00 69.83 C
ATOM 12 O2' C B1240 0.595 95.681 67.488 1.00 68.25 O
ATOM 13 C1' C B1240 2.675 94.687 66.752 1.00 69.75 C
ATOM 14 N1 C B1240 3.378 93.392 66.846 1.00 68.69 N
ATOM 15 C2 C B1240 2.646 92.205 66.676 1.00 68.55 C
ATOM 16 O2 C B1240 1.417 92.270 66.486 1.00 68.50 O
ATOM 17 N3 C B1240 3.297 91.020 66.726 1.00 68.32 N
ATOM 18 C4 C B1240 4.616 90.989 66.941 1.00 68.29 C
ATOM 19 N4 C B1240 5.217 89.798 66.971 1.00 68.31 N
ATOM 20 C5 C B1240 5.377 92.178 67.133 1.00 67.77 C
ATOM 21 C6 C B1240 4.726 93.343 67.081 1.00 67.54 C
ATOM 22 P U B1241 2.036 96.299 71.308 1.00 71.72 P
ATOM 23 OP1 U B1241 1.201 97.319 71.997 1.00 72.15 O
ATOM 24 OP2 U B1241 3.465 96.131 71.689 1.00 70.62 O
ATOM 25 O5' U B1241 1.316 94.885 71.428 1.00 70.21 O
TER
Atoms:
C2: (4.545,86.302,66.416)
OP1: (4.593,78.385,65.599)
OP2: (6.648,79.821,66.120)
C4: (6.795,85.825,66.775)
O5': (4.392,80.867,65.858)
C3': (3.038,82.904,64.290)
C1': (2.907,84.480,66.039)
O4': (2.715,83.183,66.586)
C5': (2.962,80.875,65.870)
P: (5.195,79.558,66.280)
O2: (3.606,87.105,66.291)
C4': (2.435,82.244,65.516)
C2': (2.684,84.364,64.527)
O2': (1.339,84.663,64.215)
N1: (4.281,84.928,66.347)
N3: (5.816,86.718,66.621)
N4: (8.034,86.279,66.962)
C6: (5.292,84.024,66.532)
C5: (6.549,84.425,66.744)
O3': (2.507,82.391,63.076)
OP1: (4.593,78.385,65.599)
OP2: (6.648,79.821,66.120)
C4: (6.795,85.825,66.775)
O5': (4.392,80.867,65.858)
C3': (3.038,82.904,64.290)
C1': (2.907,84.480,66.039)
O4': (2.715,83.183,66.586)
C5': (2.962,80.875,65.870)
P: (5.195,79.558,66.280)
O2: (3.606,87.105,66.291)
C4': (2.435,82.244,65.516)
C2': (2.684,84.364,64.527)
O2': (1.339,84.663,64.215)
N1: (4.281,84.928,66.347)
N3: (5.816,86.718,66.621)
N4: (8.034,86.279,66.962)
C6: (5.292,84.024,66.532)
C5: (6.549,84.425,66.744)
O3': (2.507,82.391,63.076)
C2: (2.646,92.205,66.676)
OP1: (7.272,99.073,68.498)
OP2: (7.732,96.561,68.250)
C4: (4.616,90.989,66.941)
O5': (5.622,97.567,67.417)
C3': (2.645,95.774,68.838)
C1': (2.675,94.687,66.752)
O4': (3.650,95.722,66.726)
C5': (4.786,97.013,68.435)
P: (7.164,97.822,67.709)
O2: (1.417,92.270,66.486)
C4': (3.458,96.598,67.864)
C2': (1.734,94.967,67.927)
O2': (0.595,95.681,67.488)
N1: (3.378,93.392,66.846)
N3: (3.297,91.020,66.726)
N4: (5.217,89.798,66.971)
C6: (4.726,93.343,67.081)
C5: (5.377,92.178,67.133)
O3': (1.957,96.611,69.743)
OP1: (7.272,99.073,68.498)
OP2: (7.732,96.561,68.250)
C4: (4.616,90.989,66.941)
O5': (5.622,97.567,67.417)
C3': (2.645,95.774,68.838)
C1': (2.675,94.687,66.752)
O4': (3.650,95.722,66.726)
C5': (4.786,97.013,68.435)
P: (7.164,97.822,67.709)
O2: (1.417,92.270,66.486)
C4': (3.458,96.598,67.864)
C2': (1.734,94.967,67.927)
O2': (0.595,95.681,67.488)
N1: (3.378,93.392,66.846)
N3: (3.297,91.020,66.726)
N4: (5.217,89.798,66.971)
C6: (4.726,93.343,67.081)
C5: (5.377,92.178,67.133)
O3': (1.957,96.611,69.743)
Image (generated by PyMOL):