Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0230:0365
Extra
PDB:
ATOM 1 O3' A A 229 89.637 111.652 7.058 1.00 48.58 O
ATOM 2 P A A 230 90.098 111.715 5.520 1.00 47.32 P
ATOM 3 OP1 A A 230 91.335 112.544 5.485 1.00 47.47 O
ATOM 4 OP2 A A 230 88.921 112.095 4.679 1.00 44.95 O
ATOM 5 O5' A A 230 90.474 110.209 5.177 1.00 44.74 O
ATOM 6 C5' A A 230 91.537 109.541 5.869 1.00 44.14 C
ATOM 7 C4' A A 230 91.498 108.059 5.578 1.00 43.80 C
ATOM 8 O4' A A 230 90.239 107.512 6.043 1.00 41.70 O
ATOM 9 C3' A A 230 91.521 107.652 4.116 1.00 44.35 C
ATOM 10 O3' A A 230 92.831 107.705 3.560 1.00 48.05 O
ATOM 11 C2' A A 230 90.972 106.237 4.187 1.00 42.58 C
ATOM 12 O2' A A 230 91.933 105.320 4.677 1.00 41.33 O
ATOM 13 C1' A A 230 89.873 106.406 5.235 1.00 40.29 C
ATOM 14 N9 A A 230 88.542 106.656 4.679 1.00 37.57 N
ATOM 15 C8 A A 230 87.965 107.861 4.360 1.00 37.22 C
ATOM 16 N7 A A 230 86.740 107.759 3.900 1.00 35.39 N
ATOM 17 C5 A A 230 86.493 106.395 3.912 1.00 35.06 C
ATOM 18 C6 A A 230 85.363 105.638 3.552 1.00 35.33 C
ATOM 19 N6 A A 230 84.232 106.173 3.085 1.00 36.07 N
ATOM 20 N1 A A 230 85.436 104.295 3.688 1.00 35.85 N
ATOM 21 C2 A A 230 86.580 103.759 4.158 1.00 38.27 C
ATOM 22 N3 A A 230 87.710 104.368 4.531 1.00 35.96 N
ATOM 23 C4 A A 230 87.598 105.701 4.383 1.00 36.53 C
ATOM 24 P A A 231 93.022 108.091 2.006 1.00 50.74 P
ATOM 25 OP1 A A 231 94.473 108.381 1.826 1.00 48.79 O
ATOM 26 OP2 A A 231 92.007 109.108 1.598 1.00 44.13 O
ATOM 27 O5' A A 231 92.663 106.744 1.237 1.00 49.88 O
TER
ATOM 1 O3' C B 364 95.308 99.105 1.438 1.00 61.73 O
ATOM 2 P C B 365 94.992 98.935 3.006 1.00 62.37 P
ATOM 3 OP1 C B 365 96.124 99.566 3.738 1.00 61.73 O
ATOM 4 OP2 C B 365 94.640 97.511 3.284 1.00 62.17 O
ATOM 5 O5' C B 365 93.689 99.827 3.219 1.00 58.80 O
ATOM 6 C5' C B 365 93.741 101.257 3.044 1.00 58.08 C
ATOM 7 C4' C B 365 92.424 101.878 3.431 1.00 57.44 C
ATOM 8 O4' C B 365 91.391 101.399 2.534 1.00 57.29 O
ATOM 9 C3' C B 365 91.918 101.512 4.817 1.00 56.74 C
ATOM 10 O3' C B 365 92.498 102.340 5.818 1.00 56.06 O
ATOM 11 C2' C B 365 90.416 101.715 4.681 1.00 56.83 C
ATOM 12 O2' C B 365 90.037 103.078 4.754 1.00 56.05 O
ATOM 13 C1' C B 365 90.180 101.217 3.254 1.00 57.13 C
ATOM 14 N1 C B 365 89.778 99.799 3.142 1.00 56.15 N
ATOM 15 C2 C B 365 88.416 99.462 3.258 1.00 55.62 C
ATOM 16 O2 C B 365 87.589 100.348 3.523 1.00 53.27 O
ATOM 17 N3 C B 365 88.041 98.179 3.079 1.00 55.20 N
ATOM 18 C4 C B 365 88.957 97.247 2.810 1.00 55.92 C
ATOM 19 N4 C B 365 88.537 95.998 2.606 1.00 56.44 N
ATOM 20 C5 C B 365 90.345 97.554 2.730 1.00 54.94 C
ATOM 21 C6 C B 365 90.708 98.826 2.902 1.00 55.05 C
ATOM 22 P A B 366 92.624 101.797 7.327 1.00 57.89 P
ATOM 23 OP1 A B 366 93.355 102.840 8.090 1.00 57.03 O
ATOM 24 OP2 A B 366 93.147 100.404 7.302 1.00 56.60 O
ATOM 25 O5' A B 366 91.117 101.749 7.847 1.00 55.32 O
TER
ATOM 2 P A A 230 90.098 111.715 5.520 1.00 47.32 P
ATOM 3 OP1 A A 230 91.335 112.544 5.485 1.00 47.47 O
ATOM 4 OP2 A A 230 88.921 112.095 4.679 1.00 44.95 O
ATOM 5 O5' A A 230 90.474 110.209 5.177 1.00 44.74 O
ATOM 6 C5' A A 230 91.537 109.541 5.869 1.00 44.14 C
ATOM 7 C4' A A 230 91.498 108.059 5.578 1.00 43.80 C
ATOM 8 O4' A A 230 90.239 107.512 6.043 1.00 41.70 O
ATOM 9 C3' A A 230 91.521 107.652 4.116 1.00 44.35 C
ATOM 10 O3' A A 230 92.831 107.705 3.560 1.00 48.05 O
ATOM 11 C2' A A 230 90.972 106.237 4.187 1.00 42.58 C
ATOM 12 O2' A A 230 91.933 105.320 4.677 1.00 41.33 O
ATOM 13 C1' A A 230 89.873 106.406 5.235 1.00 40.29 C
ATOM 14 N9 A A 230 88.542 106.656 4.679 1.00 37.57 N
ATOM 15 C8 A A 230 87.965 107.861 4.360 1.00 37.22 C
ATOM 16 N7 A A 230 86.740 107.759 3.900 1.00 35.39 N
ATOM 17 C5 A A 230 86.493 106.395 3.912 1.00 35.06 C
ATOM 18 C6 A A 230 85.363 105.638 3.552 1.00 35.33 C
ATOM 19 N6 A A 230 84.232 106.173 3.085 1.00 36.07 N
ATOM 20 N1 A A 230 85.436 104.295 3.688 1.00 35.85 N
ATOM 21 C2 A A 230 86.580 103.759 4.158 1.00 38.27 C
ATOM 22 N3 A A 230 87.710 104.368 4.531 1.00 35.96 N
ATOM 23 C4 A A 230 87.598 105.701 4.383 1.00 36.53 C
ATOM 24 P A A 231 93.022 108.091 2.006 1.00 50.74 P
ATOM 25 OP1 A A 231 94.473 108.381 1.826 1.00 48.79 O
ATOM 26 OP2 A A 231 92.007 109.108 1.598 1.00 44.13 O
ATOM 27 O5' A A 231 92.663 106.744 1.237 1.00 49.88 O
TER
ATOM 1 O3' C B 364 95.308 99.105 1.438 1.00 61.73 O
ATOM 2 P C B 365 94.992 98.935 3.006 1.00 62.37 P
ATOM 3 OP1 C B 365 96.124 99.566 3.738 1.00 61.73 O
ATOM 4 OP2 C B 365 94.640 97.511 3.284 1.00 62.17 O
ATOM 5 O5' C B 365 93.689 99.827 3.219 1.00 58.80 O
ATOM 6 C5' C B 365 93.741 101.257 3.044 1.00 58.08 C
ATOM 7 C4' C B 365 92.424 101.878 3.431 1.00 57.44 C
ATOM 8 O4' C B 365 91.391 101.399 2.534 1.00 57.29 O
ATOM 9 C3' C B 365 91.918 101.512 4.817 1.00 56.74 C
ATOM 10 O3' C B 365 92.498 102.340 5.818 1.00 56.06 O
ATOM 11 C2' C B 365 90.416 101.715 4.681 1.00 56.83 C
ATOM 12 O2' C B 365 90.037 103.078 4.754 1.00 56.05 O
ATOM 13 C1' C B 365 90.180 101.217 3.254 1.00 57.13 C
ATOM 14 N1 C B 365 89.778 99.799 3.142 1.00 56.15 N
ATOM 15 C2 C B 365 88.416 99.462 3.258 1.00 55.62 C
ATOM 16 O2 C B 365 87.589 100.348 3.523 1.00 53.27 O
ATOM 17 N3 C B 365 88.041 98.179 3.079 1.00 55.20 N
ATOM 18 C4 C B 365 88.957 97.247 2.810 1.00 55.92 C
ATOM 19 N4 C B 365 88.537 95.998 2.606 1.00 56.44 N
ATOM 20 C5 C B 365 90.345 97.554 2.730 1.00 54.94 C
ATOM 21 C6 C B 365 90.708 98.826 2.902 1.00 55.05 C
ATOM 22 P A B 366 92.624 101.797 7.327 1.00 57.89 P
ATOM 23 OP1 A B 366 93.355 102.840 8.090 1.00 57.03 O
ATOM 24 OP2 A B 366 93.147 100.404 7.302 1.00 56.60 O
ATOM 25 O5' A B 366 91.117 101.749 7.847 1.00 55.32 O
TER
Atoms:
OP1: (91.335,112.544,5.485)
OP2: (88.921,112.095,4.679)
C3': (91.521,107.652,4.116)
C1': (89.873,106.406,5.235)
C5': (91.537,109.541,5.869)
O4': (90.239,107.512,6.043)
C8: (87.965,107.861,4.360)
O2': (91.933,105.320,4.677)
C6: (85.363,105.638,3.552)
C5: (86.493,106.395,3.912)
C4: (87.598,105.701,4.383)
P: (90.098,111.715,5.520)
C4': (91.498,108.059,5.578)
C2': (90.972,106.237,4.187)
C2: (86.580,103.759,4.158)
N1: (85.436,104.295,3.688)
N3: (87.710,104.368,4.531)
N6: (84.232,106.173,3.085)
N7: (86.740,107.759,3.900)
N9: (88.542,106.656,4.679)
O5': (90.474,110.209,5.177)
O3': (92.831,107.705,3.560)
OP2: (88.921,112.095,4.679)
C3': (91.521,107.652,4.116)
C1': (89.873,106.406,5.235)
C5': (91.537,109.541,5.869)
O4': (90.239,107.512,6.043)
C8: (87.965,107.861,4.360)
O2': (91.933,105.320,4.677)
C6: (85.363,105.638,3.552)
C5: (86.493,106.395,3.912)
C4: (87.598,105.701,4.383)
P: (90.098,111.715,5.520)
C4': (91.498,108.059,5.578)
C2': (90.972,106.237,4.187)
C2: (86.580,103.759,4.158)
N1: (85.436,104.295,3.688)
N3: (87.710,104.368,4.531)
N6: (84.232,106.173,3.085)
N7: (86.740,107.759,3.900)
N9: (88.542,106.656,4.679)
O5': (90.474,110.209,5.177)
O3': (92.831,107.705,3.560)
C2: (88.416,99.462,3.258)
OP1: (96.124,99.566,3.738)
OP2: (94.640,97.511,3.284)
C4: (88.957,97.247,2.810)
O5': (93.689,99.827,3.219)
C3': (91.918,101.512,4.817)
C1': (90.180,101.217,3.254)
O4': (91.391,101.399,2.534)
C5': (93.741,101.257,3.044)
P: (94.992,98.935,3.006)
O2: (87.589,100.348,3.523)
C4': (92.424,101.878,3.431)
C2': (90.416,101.715,4.681)
O2': (90.037,103.078,4.754)
N1: (89.778,99.799,3.142)
N3: (88.041,98.179,3.079)
N4: (88.537,95.998,2.606)
C6: (90.708,98.826,2.902)
C5: (90.345,97.554,2.730)
O3': (92.498,102.340,5.818)
OP1: (96.124,99.566,3.738)
OP2: (94.640,97.511,3.284)
C4: (88.957,97.247,2.810)
O5': (93.689,99.827,3.219)
C3': (91.918,101.512,4.817)
C1': (90.180,101.217,3.254)
O4': (91.391,101.399,2.534)
C5': (93.741,101.257,3.044)
P: (94.992,98.935,3.006)
O2: (87.589,100.348,3.523)
C4': (92.424,101.878,3.431)
C2': (90.416,101.715,4.681)
O2': (90.037,103.078,4.754)
N1: (89.778,99.799,3.142)
N3: (88.041,98.179,3.079)
N4: (88.537,95.998,2.606)
C6: (90.708,98.826,2.902)
C5: (90.345,97.554,2.730)
O3': (92.498,102.340,5.818)
Image (generated by PyMOL):