Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A230:A365
Extra
PDB:
ATOM 1 O3' A A 229 89.657 111.591 7.299 1.00 55.49 O
ATOM 2 P A A 230 90.077 111.606 5.761 1.00 54.95 P
ATOM 3 OP1 A A 230 91.331 112.382 5.641 1.00 54.54 O
ATOM 4 OP2 A A 230 88.884 112.006 4.967 1.00 53.86 O
ATOM 5 O5' A A 230 90.414 110.072 5.487 1.00 55.07 O
ATOM 6 C5' A A 230 91.550 109.460 6.139 1.00 54.45 C
ATOM 7 C4' A A 230 91.588 107.977 5.874 1.00 55.46 C
ATOM 8 O4' A A 230 90.377 107.381 6.388 1.00 55.19 O
ATOM 9 C3' A A 230 91.594 107.556 4.416 1.00 56.41 C
ATOM 10 O3' A A 230 92.914 107.647 3.903 1.00 59.66 O
ATOM 11 C2' A A 230 91.072 106.129 4.515 1.00 54.93 C
ATOM 12 O2' A A 230 92.018 105.255 5.111 1.00 54.10 O
ATOM 13 C1' A A 230 89.972 106.318 5.553 1.00 53.49 C
ATOM 14 N9 A A 230 88.651 106.653 5.022 1.00 51.61 N
ATOM 15 C8 A A 230 88.083 107.879 4.727 1.00 50.13 C
ATOM 16 N7 A A 230 86.844 107.794 4.297 1.00 48.56 N
ATOM 17 C5 A A 230 86.587 106.427 4.299 1.00 49.33 C
ATOM 18 C6 A A 230 85.462 105.668 3.949 1.00 48.87 C
ATOM 19 N6 A A 230 84.333 106.189 3.465 1.00 48.62 N
ATOM 20 N1 A A 230 85.540 104.325 4.101 1.00 49.47 N
ATOM 21 C2 A A 230 86.683 103.786 4.548 1.00 50.61 C
ATOM 22 N3 A A 230 87.809 104.386 4.886 1.00 51.25 N
ATOM 23 C4 A A 230 87.693 105.718 4.742 1.00 50.98 C
ATOM 24 P A A 231 93.147 108.017 2.359 1.00 62.22 P
ATOM 25 OP1 A A 231 94.597 108.369 2.263 1.00 60.81 O
ATOM 26 OP2 A A 231 92.115 108.990 1.869 1.00 60.70 O
ATOM 27 O5' A A 231 92.879 106.638 1.609 1.00 61.36 O
TER
ATOM 1 O3' C B 364 95.556 99.083 1.930 1.00 72.06 O
ATOM 2 P C B 365 95.192 98.948 3.505 1.00 71.08 P
ATOM 3 OP1 C B 365 96.284 99.624 4.252 1.00 71.58 O
ATOM 4 OP2 C B 365 94.839 97.544 3.844 1.00 70.99 O
ATOM 5 O5' C B 365 93.884 99.831 3.657 1.00 69.70 O
ATOM 6 C5' C B 365 93.895 101.226 3.348 1.00 69.45 C
ATOM 7 C4' C B 365 92.567 101.832 3.724 1.00 69.95 C
ATOM 8 O4' C B 365 91.542 101.324 2.825 1.00 70.50 O
ATOM 9 C3' C B 365 92.056 101.479 5.119 1.00 69.57 C
ATOM 10 O3' C B 365 92.631 102.299 6.138 1.00 68.83 O
ATOM 11 C2' C B 365 90.552 101.674 4.971 1.00 69.77 C
ATOM 12 O2' C B 365 90.161 103.032 5.073 1.00 69.76 O
ATOM 13 C1' C B 365 90.318 101.166 3.539 1.00 70.38 C
ATOM 14 N1 C B 365 89.874 99.751 3.411 1.00 70.31 N
ATOM 15 C2 C B 365 88.495 99.436 3.522 1.00 70.44 C
ATOM 16 O2 C B 365 87.676 100.348 3.753 1.00 70.94 O
ATOM 17 N3 C B 365 88.098 98.147 3.372 1.00 69.13 N
ATOM 18 C4 C B 365 89.000 97.193 3.124 1.00 69.40 C
ATOM 19 N4 C B 365 88.567 95.933 2.978 1.00 68.49 N
ATOM 20 C5 C B 365 90.393 97.482 3.017 1.00 69.60 C
ATOM 21 C6 C B 365 90.782 98.757 3.171 1.00 69.71 C
ATOM 22 P A B 366 92.799 101.733 7.647 1.00 68.94 P
ATOM 23 OP1 A B 366 93.572 102.811 8.310 1.00 69.47 O
ATOM 24 OP2 A B 366 93.316 100.332 7.687 1.00 67.45 O
ATOM 25 O5' A B 366 91.323 101.703 8.252 1.00 68.49 O
TER
ATOM 2 P A A 230 90.077 111.606 5.761 1.00 54.95 P
ATOM 3 OP1 A A 230 91.331 112.382 5.641 1.00 54.54 O
ATOM 4 OP2 A A 230 88.884 112.006 4.967 1.00 53.86 O
ATOM 5 O5' A A 230 90.414 110.072 5.487 1.00 55.07 O
ATOM 6 C5' A A 230 91.550 109.460 6.139 1.00 54.45 C
ATOM 7 C4' A A 230 91.588 107.977 5.874 1.00 55.46 C
ATOM 8 O4' A A 230 90.377 107.381 6.388 1.00 55.19 O
ATOM 9 C3' A A 230 91.594 107.556 4.416 1.00 56.41 C
ATOM 10 O3' A A 230 92.914 107.647 3.903 1.00 59.66 O
ATOM 11 C2' A A 230 91.072 106.129 4.515 1.00 54.93 C
ATOM 12 O2' A A 230 92.018 105.255 5.111 1.00 54.10 O
ATOM 13 C1' A A 230 89.972 106.318 5.553 1.00 53.49 C
ATOM 14 N9 A A 230 88.651 106.653 5.022 1.00 51.61 N
ATOM 15 C8 A A 230 88.083 107.879 4.727 1.00 50.13 C
ATOM 16 N7 A A 230 86.844 107.794 4.297 1.00 48.56 N
ATOM 17 C5 A A 230 86.587 106.427 4.299 1.00 49.33 C
ATOM 18 C6 A A 230 85.462 105.668 3.949 1.00 48.87 C
ATOM 19 N6 A A 230 84.333 106.189 3.465 1.00 48.62 N
ATOM 20 N1 A A 230 85.540 104.325 4.101 1.00 49.47 N
ATOM 21 C2 A A 230 86.683 103.786 4.548 1.00 50.61 C
ATOM 22 N3 A A 230 87.809 104.386 4.886 1.00 51.25 N
ATOM 23 C4 A A 230 87.693 105.718 4.742 1.00 50.98 C
ATOM 24 P A A 231 93.147 108.017 2.359 1.00 62.22 P
ATOM 25 OP1 A A 231 94.597 108.369 2.263 1.00 60.81 O
ATOM 26 OP2 A A 231 92.115 108.990 1.869 1.00 60.70 O
ATOM 27 O5' A A 231 92.879 106.638 1.609 1.00 61.36 O
TER
ATOM 1 O3' C B 364 95.556 99.083 1.930 1.00 72.06 O
ATOM 2 P C B 365 95.192 98.948 3.505 1.00 71.08 P
ATOM 3 OP1 C B 365 96.284 99.624 4.252 1.00 71.58 O
ATOM 4 OP2 C B 365 94.839 97.544 3.844 1.00 70.99 O
ATOM 5 O5' C B 365 93.884 99.831 3.657 1.00 69.70 O
ATOM 6 C5' C B 365 93.895 101.226 3.348 1.00 69.45 C
ATOM 7 C4' C B 365 92.567 101.832 3.724 1.00 69.95 C
ATOM 8 O4' C B 365 91.542 101.324 2.825 1.00 70.50 O
ATOM 9 C3' C B 365 92.056 101.479 5.119 1.00 69.57 C
ATOM 10 O3' C B 365 92.631 102.299 6.138 1.00 68.83 O
ATOM 11 C2' C B 365 90.552 101.674 4.971 1.00 69.77 C
ATOM 12 O2' C B 365 90.161 103.032 5.073 1.00 69.76 O
ATOM 13 C1' C B 365 90.318 101.166 3.539 1.00 70.38 C
ATOM 14 N1 C B 365 89.874 99.751 3.411 1.00 70.31 N
ATOM 15 C2 C B 365 88.495 99.436 3.522 1.00 70.44 C
ATOM 16 O2 C B 365 87.676 100.348 3.753 1.00 70.94 O
ATOM 17 N3 C B 365 88.098 98.147 3.372 1.00 69.13 N
ATOM 18 C4 C B 365 89.000 97.193 3.124 1.00 69.40 C
ATOM 19 N4 C B 365 88.567 95.933 2.978 1.00 68.49 N
ATOM 20 C5 C B 365 90.393 97.482 3.017 1.00 69.60 C
ATOM 21 C6 C B 365 90.782 98.757 3.171 1.00 69.71 C
ATOM 22 P A B 366 92.799 101.733 7.647 1.00 68.94 P
ATOM 23 OP1 A B 366 93.572 102.811 8.310 1.00 69.47 O
ATOM 24 OP2 A B 366 93.316 100.332 7.687 1.00 67.45 O
ATOM 25 O5' A B 366 91.323 101.703 8.252 1.00 68.49 O
TER
Atoms:
OP1: (91.331,112.382,5.641)
OP2: (88.884,112.006,4.967)
C3': (91.594,107.556,4.416)
C1': (89.972,106.318,5.553)
C5': (91.550,109.460,6.139)
O4': (90.377,107.381,6.388)
C8: (88.083,107.879,4.727)
O2': (92.018,105.255,5.111)
C6: (85.462,105.668,3.949)
C5: (86.587,106.427,4.299)
C4: (87.693,105.718,4.742)
P: (90.077,111.606,5.761)
C4': (91.588,107.977,5.874)
C2': (91.072,106.129,4.515)
C2: (86.683,103.786,4.548)
N1: (85.540,104.325,4.101)
N3: (87.809,104.386,4.886)
N6: (84.333,106.189,3.465)
N7: (86.844,107.794,4.297)
N9: (88.651,106.653,5.022)
O5': (90.414,110.072,5.487)
O3': (92.914,107.647,3.903)
OP2: (88.884,112.006,4.967)
C3': (91.594,107.556,4.416)
C1': (89.972,106.318,5.553)
C5': (91.550,109.460,6.139)
O4': (90.377,107.381,6.388)
C8: (88.083,107.879,4.727)
O2': (92.018,105.255,5.111)
C6: (85.462,105.668,3.949)
C5: (86.587,106.427,4.299)
C4: (87.693,105.718,4.742)
P: (90.077,111.606,5.761)
C4': (91.588,107.977,5.874)
C2': (91.072,106.129,4.515)
C2: (86.683,103.786,4.548)
N1: (85.540,104.325,4.101)
N3: (87.809,104.386,4.886)
N6: (84.333,106.189,3.465)
N7: (86.844,107.794,4.297)
N9: (88.651,106.653,5.022)
O5': (90.414,110.072,5.487)
O3': (92.914,107.647,3.903)
C2: (88.495,99.436,3.522)
OP1: (96.284,99.624,4.252)
OP2: (94.839,97.544,3.844)
C4: (89.000,97.193,3.124)
O5': (93.884,99.831,3.657)
C3': (92.056,101.479,5.119)
C1': (90.318,101.166,3.539)
O4': (91.542,101.324,2.825)
C5': (93.895,101.226,3.348)
P: (95.192,98.948,3.505)
O2: (87.676,100.348,3.753)
C4': (92.567,101.832,3.724)
C2': (90.552,101.674,4.971)
O2': (90.161,103.032,5.073)
N1: (89.874,99.751,3.411)
N3: (88.098,98.147,3.372)
N4: (88.567,95.933,2.978)
C6: (90.782,98.757,3.171)
C5: (90.393,97.482,3.017)
O3': (92.631,102.299,6.138)
OP1: (96.284,99.624,4.252)
OP2: (94.839,97.544,3.844)
C4: (89.000,97.193,3.124)
O5': (93.884,99.831,3.657)
C3': (92.056,101.479,5.119)
C1': (90.318,101.166,3.539)
O4': (91.542,101.324,2.825)
C5': (93.895,101.226,3.348)
P: (95.192,98.948,3.505)
O2: (87.676,100.348,3.753)
C4': (92.567,101.832,3.724)
C2': (90.552,101.674,4.971)
O2': (90.161,103.032,5.073)
N1: (89.874,99.751,3.411)
N3: (88.098,98.147,3.372)
N4: (88.567,95.933,2.978)
C6: (90.782,98.757,3.171)
C5: (90.393,97.482,3.017)
O3': (92.631,102.299,6.138)
Image (generated by PyMOL):