Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A28:A35
Extra
PDB:
ATOM 1 O3' G A 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 2 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 3 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 4 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 5 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
ATOM 6 C5' A A 28 -7.865 9.359 -31.002 1.00 35.71 C
ATOM 7 C4' A A 28 -9.275 9.676 -30.539 1.00 37.41 C
ATOM 8 O4' A A 28 -9.586 8.905 -29.355 1.00 36.90 O
ATOM 9 C3' A A 28 -9.498 11.121 -30.126 1.00 36.63 C
ATOM 10 O3' A A 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 11 C2' A A 28 -10.669 11.009 -29.157 1.00 35.36 C
ATOM 12 O2' A A 28 -11.919 11.026 -29.820 1.00 39.08 O
ATOM 13 C1' A A 28 -10.449 9.644 -28.511 1.00 37.54 C
ATOM 14 N9 A A 28 -9.859 9.693 -27.174 1.00 36.39 N
ATOM 15 C8 A A 28 -8.668 9.146 -26.783 1.00 36.86 C
ATOM 16 N7 A A 28 -8.388 9.336 -25.516 1.00 33.99 N
ATOM 17 C5 A A 28 -9.469 10.059 -25.040 1.00 34.57 C
ATOM 18 C6 A A 28 -9.781 10.575 -23.766 1.00 30.61 C
ATOM 19 N6 A A 28 -8.989 10.431 -22.697 1.00 28.39 N
ATOM 20 N1 A A 28 -10.942 11.248 -23.631 1.00 31.94 N
ATOM 21 C2 A A 28 -11.733 11.391 -24.699 1.00 33.41 C
ATOM 22 N3 A A 28 -11.547 10.950 -25.942 1.00 34.28 N
ATOM 23 C4 A A 28 -10.387 10.286 -26.048 1.00 35.59 C
ATOM 24 P G A 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 25 OP1 G A 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 26 OP2 G A 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 27 O5' G A 29 -10.265 14.181 -30.386 1.00 35.16 O
TER
ATOM 1 O3' U B 34 -20.473 9.388 -28.982 1.00 45.96 O
ATOM 2 P C B 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 3 OP1 C B 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 4 OP2 C B 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 5 O5' C B 35 -18.200 10.224 -29.592 1.00 45.34 O
ATOM 6 C5' C B 35 -16.993 10.304 -30.335 1.00 42.30 C
ATOM 7 C4' C B 35 -15.837 10.601 -29.402 1.00 42.14 C
ATOM 8 O4' C B 35 -16.005 11.917 -28.814 1.00 41.31 O
ATOM 9 C3' C B 35 -15.746 9.680 -28.197 1.00 37.95 C
ATOM 10 O3' C B 35 -15.105 8.459 -28.532 1.00 38.58 O
ATOM 11 C2' C B 35 -14.891 10.530 -27.267 1.00 35.12 C
ATOM 12 O2' C B 35 -13.537 10.557 -27.666 1.00 34.45 O
ATOM 13 C1' C B 35 -15.523 11.900 -27.482 1.00 39.02 C
ATOM 14 N1 C B 35 -16.644 12.178 -26.533 1.00 39.09 N
ATOM 15 C2 C B 35 -16.345 12.526 -25.212 1.00 37.14 C
ATOM 16 O2 C B 35 -15.161 12.598 -24.863 1.00 36.33 O
ATOM 17 N3 C B 35 -17.361 12.778 -24.351 1.00 37.32 N
ATOM 18 C4 C B 35 -18.627 12.691 -24.765 1.00 38.94 C
ATOM 19 N4 C B 35 -19.594 12.947 -23.877 1.00 35.26 N
ATOM 20 C5 C B 35 -18.952 12.335 -26.108 1.00 40.32 C
ATOM 21 C6 C B 35 -17.940 12.089 -26.949 1.00 41.47 C
ATOM 22 P C B 36 -15.474 7.146 -27.699 1.00 37.24 P
ATOM 23 OP1 C B 36 -14.801 5.993 -28.331 1.00 41.20 O
ATOM 24 OP2 C B 36 -16.935 7.131 -27.474 1.00 34.30 O
ATOM 25 O5' C B 36 -14.761 7.407 -26.296 1.00 33.19 O
TER
ATOM 2 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 3 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 4 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 5 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
ATOM 6 C5' A A 28 -7.865 9.359 -31.002 1.00 35.71 C
ATOM 7 C4' A A 28 -9.275 9.676 -30.539 1.00 37.41 C
ATOM 8 O4' A A 28 -9.586 8.905 -29.355 1.00 36.90 O
ATOM 9 C3' A A 28 -9.498 11.121 -30.126 1.00 36.63 C
ATOM 10 O3' A A 28 -9.850 11.887 -31.266 1.00 38.11 O
ATOM 11 C2' A A 28 -10.669 11.009 -29.157 1.00 35.36 C
ATOM 12 O2' A A 28 -11.919 11.026 -29.820 1.00 39.08 O
ATOM 13 C1' A A 28 -10.449 9.644 -28.511 1.00 37.54 C
ATOM 14 N9 A A 28 -9.859 9.693 -27.174 1.00 36.39 N
ATOM 15 C8 A A 28 -8.668 9.146 -26.783 1.00 36.86 C
ATOM 16 N7 A A 28 -8.388 9.336 -25.516 1.00 33.99 N
ATOM 17 C5 A A 28 -9.469 10.059 -25.040 1.00 34.57 C
ATOM 18 C6 A A 28 -9.781 10.575 -23.766 1.00 30.61 C
ATOM 19 N6 A A 28 -8.989 10.431 -22.697 1.00 28.39 N
ATOM 20 N1 A A 28 -10.942 11.248 -23.631 1.00 31.94 N
ATOM 21 C2 A A 28 -11.733 11.391 -24.699 1.00 33.41 C
ATOM 22 N3 A A 28 -11.547 10.950 -25.942 1.00 34.28 N
ATOM 23 C4 A A 28 -10.387 10.286 -26.048 1.00 35.59 C
ATOM 24 P G A 29 -9.333 13.395 -31.416 1.00 37.26 P
ATOM 25 OP1 G A 29 -9.667 13.855 -32.782 1.00 37.85 O
ATOM 26 OP2 G A 29 -7.933 13.451 -30.942 1.00 33.66 O
ATOM 27 O5' G A 29 -10.265 14.181 -30.386 1.00 35.16 O
TER
ATOM 1 O3' U B 34 -20.473 9.388 -28.982 1.00 45.96 O
ATOM 2 P C B 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 3 OP1 C B 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 4 OP2 C B 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 5 O5' C B 35 -18.200 10.224 -29.592 1.00 45.34 O
ATOM 6 C5' C B 35 -16.993 10.304 -30.335 1.00 42.30 C
ATOM 7 C4' C B 35 -15.837 10.601 -29.402 1.00 42.14 C
ATOM 8 O4' C B 35 -16.005 11.917 -28.814 1.00 41.31 O
ATOM 9 C3' C B 35 -15.746 9.680 -28.197 1.00 37.95 C
ATOM 10 O3' C B 35 -15.105 8.459 -28.532 1.00 38.58 O
ATOM 11 C2' C B 35 -14.891 10.530 -27.267 1.00 35.12 C
ATOM 12 O2' C B 35 -13.537 10.557 -27.666 1.00 34.45 O
ATOM 13 C1' C B 35 -15.523 11.900 -27.482 1.00 39.02 C
ATOM 14 N1 C B 35 -16.644 12.178 -26.533 1.00 39.09 N
ATOM 15 C2 C B 35 -16.345 12.526 -25.212 1.00 37.14 C
ATOM 16 O2 C B 35 -15.161 12.598 -24.863 1.00 36.33 O
ATOM 17 N3 C B 35 -17.361 12.778 -24.351 1.00 37.32 N
ATOM 18 C4 C B 35 -18.627 12.691 -24.765 1.00 38.94 C
ATOM 19 N4 C B 35 -19.594 12.947 -23.877 1.00 35.26 N
ATOM 20 C5 C B 35 -18.952 12.335 -26.108 1.00 40.32 C
ATOM 21 C6 C B 35 -17.940 12.089 -26.949 1.00 41.47 C
ATOM 22 P C B 36 -15.474 7.146 -27.699 1.00 37.24 P
ATOM 23 OP1 C B 36 -14.801 5.993 -28.331 1.00 41.20 O
ATOM 24 OP2 C B 36 -16.935 7.131 -27.474 1.00 34.30 O
ATOM 25 O5' C B 36 -14.761 7.407 -26.296 1.00 33.19 O
TER
Atoms:
OP1: (-5.128,8.112,-29.922)
OP2: (-4.886,10.105,-31.510)
C3': (-9.498,11.121,-30.126)
C1': (-10.449,9.644,-28.511)
C5': (-7.865,9.359,-31.002)
O4': (-9.586,8.905,-29.355)
C8: (-8.668,9.146,-26.783)
O2': (-11.919,11.026,-29.820)
C6: (-9.781,10.575,-23.766)
C5: (-9.469,10.059,-25.040)
C4: (-10.387,10.286,-26.048)
P: (-5.361,9.543,-30.227)
C4': (-9.275,9.676,-30.539)
C2': (-10.669,11.009,-29.157)
C2: (-11.733,11.391,-24.699)
N1: (-10.942,11.248,-23.631)
N3: (-11.547,10.950,-25.942)
N6: (-8.989,10.431,-22.697)
N7: (-8.388,9.336,-25.516)
N9: (-9.859,9.693,-27.174)
O5': (-6.924,9.836,-30.058)
O3': (-9.850,11.887,-31.266)
OP2: (-4.886,10.105,-31.510)
C3': (-9.498,11.121,-30.126)
C1': (-10.449,9.644,-28.511)
C5': (-7.865,9.359,-31.002)
O4': (-9.586,8.905,-29.355)
C8: (-8.668,9.146,-26.783)
O2': (-11.919,11.026,-29.820)
C6: (-9.781,10.575,-23.766)
C5: (-9.469,10.059,-25.040)
C4: (-10.387,10.286,-26.048)
P: (-5.361,9.543,-30.227)
C4': (-9.275,9.676,-30.539)
C2': (-10.669,11.009,-29.157)
C2: (-11.733,11.391,-24.699)
N1: (-10.942,11.248,-23.631)
N3: (-11.547,10.950,-25.942)
N6: (-8.989,10.431,-22.697)
N7: (-8.388,9.336,-25.516)
N9: (-9.859,9.693,-27.174)
O5': (-6.924,9.836,-30.058)
O3': (-9.850,11.887,-31.266)
C2: (-16.345,12.526,-25.212)
OP1: (-20.100,10.529,-31.172)
OP2: (-19.131,8.201,-30.722)
C4: (-18.627,12.691,-24.765)
O5': (-18.200,10.224,-29.592)
C3': (-15.746,9.680,-28.197)
C1': (-15.523,11.900,-27.482)
O4': (-16.005,11.917,-28.814)
C5': (-16.993,10.304,-30.335)
P: (-19.496,9.552,-30.240)
O2: (-15.161,12.598,-24.863)
C4': (-15.837,10.601,-29.402)
C2': (-14.891,10.530,-27.267)
O2': (-13.537,10.557,-27.666)
N1: (-16.644,12.178,-26.533)
N3: (-17.361,12.778,-24.351)
N4: (-19.594,12.947,-23.877)
C6: (-17.940,12.089,-26.949)
C5: (-18.952,12.335,-26.108)
O3': (-15.105,8.459,-28.532)
OP1: (-20.100,10.529,-31.172)
OP2: (-19.131,8.201,-30.722)
C4: (-18.627,12.691,-24.765)
O5': (-18.200,10.224,-29.592)
C3': (-15.746,9.680,-28.197)
C1': (-15.523,11.900,-27.482)
O4': (-16.005,11.917,-28.814)
C5': (-16.993,10.304,-30.335)
P: (-19.496,9.552,-30.240)
O2: (-15.161,12.598,-24.863)
C4': (-15.837,10.601,-29.402)
C2': (-14.891,10.530,-27.267)
O2': (-13.537,10.557,-27.666)
N1: (-16.644,12.178,-26.533)
N3: (-17.361,12.778,-24.351)
N4: (-19.594,12.947,-23.877)
C6: (-17.940,12.089,-26.949)
C5: (-18.952,12.335,-26.108)
O3': (-15.105,8.459,-28.532)
Image (generated by PyMOL):