ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MEI:A8:B13

Extra

PDB:
ATOM 1 O3' G A 7 14.286 -8.700 52.333 1.00 46.19 O
ATOM 2 P C A 8 13.338 -8.029 53.443 1.00 57.53 P
ATOM 3 OP1 C A 8 13.480 -8.962 54.623 1.00 55.72 O
ATOM 4 OP2 C A 8 12.043 -7.720 52.824 1.00 59.26 O
ATOM 5 O5' C A 8 13.973 -6.564 53.795 1.00 40.53 O
ATOM 6 C5' C A 8 15.295 -6.595 54.266 1.00 36.92 C
ATOM 7 C4' C A 8 16.124 -5.318 54.159 1.00 33.54 C
ATOM 8 O4' C A 8 16.293 -4.878 52.800 1.00 35.49 O
ATOM 9 C3' C A 8 15.615 -4.066 54.821 1.00 35.82 C
ATOM 10 O3' C A 8 15.750 -4.187 56.188 1.00 40.08 O
ATOM 11 C2' C A 8 16.631 -3.069 54.286 1.00 33.81 C
ATOM 12 O2' C A 8 17.886 -3.098 54.944 1.00 29.54 O
ATOM 13 C1' C A 8 16.767 -3.531 52.839 1.00 30.98 C
ATOM 14 N1 C A 8 15.952 -2.673 51.931 1.00 28.14 N
ATOM 15 C2 C A 8 16.423 -1.376 51.641 1.00 27.49 C
ATOM 16 O2 C A 8 17.495 -1.005 52.153 1.00 28.75 O
ATOM 17 N3 C A 8 15.679 -0.566 50.815 1.00 26.60 N
ATOM 18 C4 C A 8 14.532 -0.998 50.278 1.00 29.90 C
ATOM 19 N4 C A 8 13.882 -0.156 49.460 1.00 33.21 N
ATOM 20 C5 C A 8 14.022 -2.308 50.581 1.00 27.69 C
ATOM 21 C6 C A 8 14.761 -3.112 51.389 1.00 25.12 C
ATOM 22 P C A 9 14.666 -3.546 57.177 1.00 39.07 P
ATOM 23 OP1 C A 9 15.102 -3.947 58.497 1.00 45.37 O
ATOM 24 OP2 C A 9 13.275 -3.813 56.766 1.00 38.04 O
ATOM 25 O5' C A 9 14.909 -1.979 57.020 1.00 33.52 O
TER

ATOM 1 O3' G B 12 10.962 8.601 45.286 1.00 26.34 O
ATOM 2 P C B 13 11.977 8.009 44.219 1.00 27.94 P
ATOM 3 OP1 C B 13 12.405 9.185 43.433 1.00 26.51 O
ATOM 4 OP2 C B 13 11.365 6.813 43.568 1.00 26.03 O
ATOM 5 O5' C B 13 13.210 7.559 45.150 1.00 27.90 O
ATOM 6 C5' C B 13 14.023 8.538 45.860 1.00 26.46 C
ATOM 7 C4' C B 13 14.911 7.849 46.919 1.00 31.23 C
ATOM 8 O4' C B 13 14.143 7.096 47.918 1.00 26.20 O
ATOM 9 C3' C B 13 15.864 6.811 46.360 1.00 26.26 C
ATOM 10 O3' C B 13 16.998 7.473 45.757 1.00 26.45 O
ATOM 11 C2' C B 13 16.202 6.035 47.614 1.00 26.15 C
ATOM 12 O2' C B 13 17.013 6.786 48.485 1.00 26.32 O
ATOM 13 C1' C B 13 14.824 5.919 48.247 1.00 26.05 C
ATOM 14 N1 C B 13 14.024 4.719 47.798 1.00 26.12 N
ATOM 15 C2 C B 13 14.273 3.511 48.457 1.00 26.65 C
ATOM 16 O2 C B 13 15.138 3.497 49.368 1.00 26.77 O
ATOM 17 N3 C B 13 13.550 2.416 48.072 1.00 25.50 N
ATOM 18 C4 C B 13 12.634 2.522 47.100 1.00 28.25 C
ATOM 19 N4 C B 13 11.976 1.427 46.757 1.00 25.32 N
ATOM 20 C5 C B 13 12.372 3.744 46.399 1.00 28.83 C
ATOM 21 C6 C B 13 13.098 4.804 46.789 1.00 25.79 C
ATOM 22 P C B 14 17.925 6.734 44.674 1.00 31.18 P
ATOM 23 OP1 C B 14 18.907 7.731 44.200 1.00 32.50 O
ATOM 24 OP2 C B 14 17.005 6.019 43.747 1.00 26.22 O
ATOM 25 O5' C B 14 18.690 5.595 45.526 1.00 31.72 O
TER

Atoms:
C2: (16.423,-1.376,51.641)
OP1: (13.480,-8.962,54.623)
OP2: (12.043,-7.720,52.824)
C4: (14.532,-0.998,50.278)
O5': (13.973,-6.564,53.795)
C3': (15.615,-4.066,54.821)
C1': (16.767,-3.531,52.839)
O4': (16.293,-4.878,52.800)
C5': (15.295,-6.595,54.266)
P: (13.338,-8.029,53.443)
O2: (17.495,-1.005,52.153)
C4': (16.124,-5.318,54.159)
C2': (16.631,-3.069,54.286)
O2': (17.886,-3.098,54.944)
N1: (15.952,-2.673,51.931)
N3: (15.679,-0.566,50.815)
N4: (13.882,-0.156,49.460)
C6: (14.761,-3.112,51.389)
C5: (14.022,-2.308,50.581)
O3': (15.750,-4.187,56.188)
C2: (14.273,3.511,48.457)
OP1: (12.405,9.185,43.433)
OP2: (11.365,6.813,43.568)
C4: (12.634,2.522,47.100)
O5': (13.210,7.559,45.150)
C3': (15.864,6.811,46.360)
C1': (14.824,5.919,48.247)
O4': (14.143,7.096,47.918)
C5': (14.023,8.538,45.860)
P: (11.977,8.009,44.219)
O2: (15.138,3.497,49.368)
C4': (14.911,7.849,46.919)
C2': (16.202,6.035,47.614)
O2': (17.013,6.786,48.485)
N1: (14.024,4.719,47.798)
N3: (13.550,2.416,48.072)
N4: (11.976,1.427,46.757)
C6: (13.098,4.804,46.789)
C5: (12.372,3.744,46.399)
O3': (16.998,7.473,45.757)
Image (generated by PyMOL):
PyMOL image
show in jmol