ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1977:A1980

Extra

PDB:
ATOM 1 O3' A A1976 79.472 -62.592 -17.998 1.00 26.37 O
ATOM 2 P G A1977 79.957 -61.041 -18.016 1.00 22.80 P
ATOM 3 OP1 G A1977 79.091 -60.302 -18.980 1.00 25.27 O
ATOM 4 OP2 G A1977 81.401 -61.052 -18.235 1.00 30.40 O
ATOM 5 O5' G A1977 79.633 -60.560 -16.546 1.00 30.63 O
ATOM 6 C5' G A1977 80.670 -60.275 -15.625 1.00 31.35 C
ATOM 7 C4' G A1977 80.666 -58.823 -15.234 1.00 35.12 C
ATOM 8 O4' G A1977 81.132 -58.691 -13.861 1.00 28.50 O
ATOM 9 C3' G A1977 81.572 -57.934 -16.070 1.00 35.08 C
ATOM 10 O3' G A1977 81.014 -56.615 -16.148 1.00 32.34 O
ATOM 11 C2' G A1977 82.819 -57.908 -15.221 1.00 32.67 C
ATOM 12 O2' G A1977 83.700 -56.860 -15.500 1.00 43.38 O
ATOM 13 C1' G A1977 82.208 -57.794 -13.842 1.00 32.21 C
ATOM 14 N9 G A1977 83.116 -58.165 -12.760 1.00 39.01 N
ATOM 15 C8 G A1977 83.606 -59.405 -12.495 1.00 33.93 C
ATOM 16 N7 G A1977 84.414 -59.418 -11.481 1.00 34.26 N
ATOM 17 C5 G A1977 84.468 -58.104 -11.055 1.00 31.56 C
ATOM 18 C6 G A1977 85.185 -57.496 -10.013 1.00 28.92 C
ATOM 19 O6 G A1977 85.956 -57.991 -9.210 1.00 34.05 O
ATOM 20 N1 G A1977 84.971 -56.151 -9.907 1.00 28.43 N
ATOM 21 C2 G A1977 84.186 -55.439 -10.710 1.00 32.02 C
ATOM 22 N2 G A1977 84.169 -54.142 -10.390 1.00 37.50 N
ATOM 23 N3 G A1977 83.508 -55.974 -11.705 1.00 39.63 N
ATOM 24 C4 G A1977 83.681 -57.309 -11.825 1.00 36.12 C
ATOM 25 P A A1978 80.771 -55.921 -17.589 1.00 23.14 P
ATOM 26 OP1 A A1978 79.919 -56.843 -18.391 1.00 94.18 O
ATOM 27 OP2 A A1978 82.100 -55.543 -18.120 1.00 99.67 O
ATOM 28 O5' A A1978 79.962 -54.619 -17.218 1.00 37.61 O
TER

ATOM 1 O3' C B1979 86.235 -48.097 -13.392 1.00 32.28 O
ATOM 2 P C B1980 87.009 -47.750 -14.760 1.00 44.74 P
ATOM 3 OP1 C B1980 87.539 -46.364 -14.620 1.00 39.08 O
ATOM 4 OP2 C B1980 86.077 -48.057 -15.898 1.00 49.78 O
ATOM 5 O5' C B1980 88.206 -48.800 -14.768 1.00 48.94 O
ATOM 6 C5' C B1980 89.336 -48.647 -13.923 1.00 37.34 C
ATOM 7 C4' C B1980 90.278 -49.805 -14.076 1.00 29.27 C
ATOM 8 O4' C B1980 89.631 -51.024 -13.620 1.00 32.91 O
ATOM 9 C3' C B1980 90.686 -50.132 -15.487 1.00 25.91 C
ATOM 10 O3' C B1980 91.663 -49.250 -15.999 1.00 24.00 O
ATOM 11 C2' C B1980 91.124 -51.594 -15.379 1.00 34.30 C
ATOM 12 O2' C B1980 92.421 -51.710 -14.835 1.00 35.16 O
ATOM 13 C1' C B1980 90.135 -52.132 -14.344 1.00 39.08 C
ATOM 14 N1 C B1980 89.019 -52.852 -14.984 1.00 32.11 N
ATOM 15 C2 C B1980 89.167 -54.217 -15.267 1.00 34.71 C
ATOM 16 O2 C B1980 90.221 -54.791 -14.935 1.00 39.02 O
ATOM 17 N3 C B1980 88.168 -54.882 -15.898 1.00 32.24 N
ATOM 18 C4 C B1980 87.058 -54.223 -16.236 1.00 33.06 C
ATOM 19 N4 C B1980 86.057 -54.859 -16.846 1.00 37.29 N
ATOM 20 C5 C B1980 86.899 -52.845 -15.951 1.00 40.28 C
ATOM 21 C6 C B1980 87.897 -52.198 -15.340 1.00 37.19 C
ATOM 22 P C B1981 91.382 -48.439 -17.376 1.00 36.24 P
ATOM 23 OP1 C B1981 91.930 -47.096 -17.227 1.00 26.03 O
ATOM 24 OP2 C B1981 89.945 -48.573 -17.680 1.00 44.13 O
ATOM 25 O5' C B1981 92.225 -49.256 -18.444 1.00 27.76 O
TER

Atoms:
OP1: (79.091,-60.302,-18.980)
OP2: (81.401,-61.052,-18.235)
C3': (81.572,-57.934,-16.070)
C1': (82.208,-57.794,-13.842)
C5': (80.670,-60.275,-15.625)
O6: (85.956,-57.991,-9.210)
O4': (81.132,-58.691,-13.861)
C8: (83.606,-59.405,-12.495)
C2: (84.186,-55.439,-10.710)
C6: (85.185,-57.496,-10.013)
C5: (84.468,-58.104,-11.055)
C4: (83.681,-57.309,-11.825)
P: (79.957,-61.041,-18.016)
C4': (80.666,-58.823,-15.234)
C2': (82.819,-57.908,-15.221)
O2': (83.700,-56.860,-15.500)
N1: (84.971,-56.151,-9.907)
N2: (84.169,-54.142,-10.390)
N3: (83.508,-55.974,-11.705)
N7: (84.414,-59.418,-11.481)
N9: (83.116,-58.165,-12.760)
O5': (79.633,-60.560,-16.546)
O3': (81.014,-56.615,-16.148)
C2: (89.167,-54.217,-15.267)
OP1: (87.539,-46.364,-14.620)
OP2: (86.077,-48.057,-15.898)
C4: (87.058,-54.223,-16.236)
O5': (88.206,-48.800,-14.768)
C3': (90.686,-50.132,-15.487)
C1': (90.135,-52.132,-14.344)
O4': (89.631,-51.024,-13.620)
C5': (89.336,-48.647,-13.923)
P: (87.009,-47.750,-14.760)
O2: (90.221,-54.791,-14.935)
C4': (90.278,-49.805,-14.076)
C2': (91.124,-51.594,-15.379)
O2': (92.421,-51.710,-14.835)
N1: (89.019,-52.852,-14.984)
N3: (88.168,-54.882,-15.898)
N4: (86.057,-54.859,-16.846)
C6: (87.897,-52.198,-15.340)
C5: (86.899,-52.845,-15.951)
O3': (91.663,-49.250,-15.999)
Image (generated by PyMOL):
PyMOL image
show in jmol