Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12210:12213
Extra
PDB:
ATOM 1 O3' A A2209 38.846 0.163 72.321 1.00 83.26 O
ATOM 2 P G A2210 37.484 -0.715 72.287 1.00 96.76 P
ATOM 3 OP1 G A2210 36.827 -0.540 73.602 1.00 96.84 O
ATOM 4 OP2 G A2210 37.840 -2.116 71.828 1.00 96.66 O
ATOM 5 O5' G A2210 36.639 0.021 71.136 1.00 96.78 O
ATOM 6 C5' G A2210 35.708 1.067 71.424 1.00 96.88 C
ATOM 7 C4' G A2210 34.276 0.570 71.341 1.00 96.89 C
ATOM 8 O4' G A2210 33.601 1.244 70.241 1.00 96.93 O
ATOM 9 C3' G A2210 34.135 -0.924 71.052 1.00 96.80 C
ATOM 10 O3' G A2210 33.828 -1.761 72.218 1.00 96.81 O
ATOM 11 C2' G A2210 33.039 -1.047 69.985 1.00 96.81 C
ATOM 12 O2' G A2210 31.938 -1.841 70.365 1.00 96.83 O
ATOM 13 C1' G A2210 32.611 0.386 69.686 1.00 96.90 C
ATOM 14 N9 G A2210 32.513 0.620 68.241 1.00 96.90 N
ATOM 15 C8 G A2210 33.612 0.519 67.415 1.00 96.83 C
ATOM 16 N7 G A2210 33.325 0.671 66.155 1.00 96.85 N
ATOM 17 C5 G A2210 31.944 0.849 66.125 1.00 96.92 C
ATOM 18 C6 G A2210 31.102 1.063 64.992 1.00 96.99 C
ATOM 19 O6 G A2210 31.472 1.123 63.801 1.00 96.99 O
ATOM 20 N1 G A2210 29.756 1.193 65.375 1.00 97.07 N
ATOM 21 C2 G A2210 29.280 1.131 66.680 1.00 97.10 C
ATOM 22 N2 G A2210 27.951 1.287 66.849 1.00 97.20 N
ATOM 23 N3 G A2210 30.076 0.935 67.741 1.00 97.04 N
ATOM 24 C4 G A2210 31.400 0.796 67.408 1.00 96.95 C
ATOM 25 P A A2211 33.157 -1.228 73.594 1.00138.28 P
ATOM 26 OP1 A A2211 34.074 -0.231 74.198 1.00138.34 O
ATOM 27 OP2 A A2211 32.823 -2.435 74.387 1.00138.28 O
ATOM 28 O5' A A2211 31.824 -0.525 73.100 1.00138.36 O
TER
ATOM 1 O3' C B2212 23.380 -4.304 70.563 1.00 63.43 O
ATOM 2 P C B2213 23.474 -5.873 70.262 1.00 40.39 P
ATOM 3 OP1 C B2213 22.105 -6.432 70.379 1.00 40.50 O
ATOM 4 OP2 C B2213 24.556 -6.433 71.144 1.00 40.31 O
ATOM 5 O5' C B2213 23.936 -5.902 68.745 1.00 40.33 O
ATOM 6 C5' C B2213 23.347 -6.772 67.822 1.00 40.36 C
ATOM 7 C4' C B2213 24.355 -7.260 66.819 1.00 40.27 C
ATOM 8 O4' C B2213 25.309 -6.220 66.539 1.00 40.21 O
ATOM 9 C3' C B2213 25.209 -8.408 67.262 1.00 40.18 C
ATOM 10 O3' C B2213 24.548 -9.637 67.154 1.00 40.23 O
ATOM 11 C2' C B2213 26.421 -8.296 66.368 1.00 40.09 C
ATOM 12 O2' C B2213 26.167 -8.899 65.132 1.00 40.12 O
ATOM 13 C1' C B2213 26.522 -6.788 66.154 1.00 40.11 C
ATOM 14 N1 C B2213 27.574 -6.208 66.957 1.00 40.04 N
ATOM 15 C2 C B2213 28.889 -6.287 66.458 1.00 39.95 C
ATOM 16 O2 C B2213 29.065 -6.820 65.341 1.00 39.94 O
ATOM 17 N3 C B2213 29.905 -5.797 67.215 1.00 39.90 N
ATOM 18 C4 C B2213 29.606 -5.258 68.412 1.00 39.94 C
ATOM 19 N4 C B2213 30.566 -4.750 69.170 1.00 39.91 N
ATOM 20 C5 C B2213 28.258 -5.208 68.890 1.00 40.03 C
ATOM 21 C6 C B2213 27.261 -5.685 68.147 1.00 40.08 C
ATOM 22 P C B2214 24.776 -10.741 68.290 1.00 35.69 P
ATOM 23 OP1 C B2214 23.608 -11.624 68.274 1.00 35.79 O
ATOM 24 OP2 C B2214 25.104 -10.008 69.564 1.00 35.67 O
ATOM 25 O5' C B2214 26.059 -11.543 67.747 1.00 35.60 O
TER
ATOM 2 P G A2210 37.484 -0.715 72.287 1.00 96.76 P
ATOM 3 OP1 G A2210 36.827 -0.540 73.602 1.00 96.84 O
ATOM 4 OP2 G A2210 37.840 -2.116 71.828 1.00 96.66 O
ATOM 5 O5' G A2210 36.639 0.021 71.136 1.00 96.78 O
ATOM 6 C5' G A2210 35.708 1.067 71.424 1.00 96.88 C
ATOM 7 C4' G A2210 34.276 0.570 71.341 1.00 96.89 C
ATOM 8 O4' G A2210 33.601 1.244 70.241 1.00 96.93 O
ATOM 9 C3' G A2210 34.135 -0.924 71.052 1.00 96.80 C
ATOM 10 O3' G A2210 33.828 -1.761 72.218 1.00 96.81 O
ATOM 11 C2' G A2210 33.039 -1.047 69.985 1.00 96.81 C
ATOM 12 O2' G A2210 31.938 -1.841 70.365 1.00 96.83 O
ATOM 13 C1' G A2210 32.611 0.386 69.686 1.00 96.90 C
ATOM 14 N9 G A2210 32.513 0.620 68.241 1.00 96.90 N
ATOM 15 C8 G A2210 33.612 0.519 67.415 1.00 96.83 C
ATOM 16 N7 G A2210 33.325 0.671 66.155 1.00 96.85 N
ATOM 17 C5 G A2210 31.944 0.849 66.125 1.00 96.92 C
ATOM 18 C6 G A2210 31.102 1.063 64.992 1.00 96.99 C
ATOM 19 O6 G A2210 31.472 1.123 63.801 1.00 96.99 O
ATOM 20 N1 G A2210 29.756 1.193 65.375 1.00 97.07 N
ATOM 21 C2 G A2210 29.280 1.131 66.680 1.00 97.10 C
ATOM 22 N2 G A2210 27.951 1.287 66.849 1.00 97.20 N
ATOM 23 N3 G A2210 30.076 0.935 67.741 1.00 97.04 N
ATOM 24 C4 G A2210 31.400 0.796 67.408 1.00 96.95 C
ATOM 25 P A A2211 33.157 -1.228 73.594 1.00138.28 P
ATOM 26 OP1 A A2211 34.074 -0.231 74.198 1.00138.34 O
ATOM 27 OP2 A A2211 32.823 -2.435 74.387 1.00138.28 O
ATOM 28 O5' A A2211 31.824 -0.525 73.100 1.00138.36 O
TER
ATOM 1 O3' C B2212 23.380 -4.304 70.563 1.00 63.43 O
ATOM 2 P C B2213 23.474 -5.873 70.262 1.00 40.39 P
ATOM 3 OP1 C B2213 22.105 -6.432 70.379 1.00 40.50 O
ATOM 4 OP2 C B2213 24.556 -6.433 71.144 1.00 40.31 O
ATOM 5 O5' C B2213 23.936 -5.902 68.745 1.00 40.33 O
ATOM 6 C5' C B2213 23.347 -6.772 67.822 1.00 40.36 C
ATOM 7 C4' C B2213 24.355 -7.260 66.819 1.00 40.27 C
ATOM 8 O4' C B2213 25.309 -6.220 66.539 1.00 40.21 O
ATOM 9 C3' C B2213 25.209 -8.408 67.262 1.00 40.18 C
ATOM 10 O3' C B2213 24.548 -9.637 67.154 1.00 40.23 O
ATOM 11 C2' C B2213 26.421 -8.296 66.368 1.00 40.09 C
ATOM 12 O2' C B2213 26.167 -8.899 65.132 1.00 40.12 O
ATOM 13 C1' C B2213 26.522 -6.788 66.154 1.00 40.11 C
ATOM 14 N1 C B2213 27.574 -6.208 66.957 1.00 40.04 N
ATOM 15 C2 C B2213 28.889 -6.287 66.458 1.00 39.95 C
ATOM 16 O2 C B2213 29.065 -6.820 65.341 1.00 39.94 O
ATOM 17 N3 C B2213 29.905 -5.797 67.215 1.00 39.90 N
ATOM 18 C4 C B2213 29.606 -5.258 68.412 1.00 39.94 C
ATOM 19 N4 C B2213 30.566 -4.750 69.170 1.00 39.91 N
ATOM 20 C5 C B2213 28.258 -5.208 68.890 1.00 40.03 C
ATOM 21 C6 C B2213 27.261 -5.685 68.147 1.00 40.08 C
ATOM 22 P C B2214 24.776 -10.741 68.290 1.00 35.69 P
ATOM 23 OP1 C B2214 23.608 -11.624 68.274 1.00 35.79 O
ATOM 24 OP2 C B2214 25.104 -10.008 69.564 1.00 35.67 O
ATOM 25 O5' C B2214 26.059 -11.543 67.747 1.00 35.60 O
TER
Atoms:
OP1: (36.827,-0.540,73.602)
OP2: (37.840,-2.116,71.828)
C3': (34.135,-0.924,71.052)
C1': (32.611,0.386,69.686)
C5': (35.708,1.067,71.424)
O6: (31.472,1.123,63.801)
O4': (33.601,1.244,70.241)
C8: (33.612,0.519,67.415)
C2: (29.280,1.131,66.680)
C6: (31.102,1.063,64.992)
C5: (31.944,0.849,66.125)
C4: (31.400,0.796,67.408)
P: (37.484,-0.715,72.287)
C4': (34.276,0.570,71.341)
C2': (33.039,-1.047,69.985)
O2': (31.938,-1.841,70.365)
N1: (29.756,1.193,65.375)
N2: (27.951,1.287,66.849)
N3: (30.076,0.935,67.741)
N7: (33.325,0.671,66.155)
N9: (32.513,0.620,68.241)
O5': (36.639,0.021,71.136)
O3': (33.828,-1.761,72.218)
OP2: (37.840,-2.116,71.828)
C3': (34.135,-0.924,71.052)
C1': (32.611,0.386,69.686)
C5': (35.708,1.067,71.424)
O6: (31.472,1.123,63.801)
O4': (33.601,1.244,70.241)
C8: (33.612,0.519,67.415)
C2: (29.280,1.131,66.680)
C6: (31.102,1.063,64.992)
C5: (31.944,0.849,66.125)
C4: (31.400,0.796,67.408)
P: (37.484,-0.715,72.287)
C4': (34.276,0.570,71.341)
C2': (33.039,-1.047,69.985)
O2': (31.938,-1.841,70.365)
N1: (29.756,1.193,65.375)
N2: (27.951,1.287,66.849)
N3: (30.076,0.935,67.741)
N7: (33.325,0.671,66.155)
N9: (32.513,0.620,68.241)
O5': (36.639,0.021,71.136)
O3': (33.828,-1.761,72.218)
C2: (28.889,-6.287,66.458)
OP1: (22.105,-6.432,70.379)
OP2: (24.556,-6.433,71.144)
C4: (29.606,-5.258,68.412)
O5': (23.936,-5.902,68.745)
C3': (25.209,-8.408,67.262)
C1': (26.522,-6.788,66.154)
O4': (25.309,-6.220,66.539)
C5': (23.347,-6.772,67.822)
P: (23.474,-5.873,70.262)
O2: (29.065,-6.820,65.341)
C4': (24.355,-7.260,66.819)
C2': (26.421,-8.296,66.368)
O2': (26.167,-8.899,65.132)
N1: (27.574,-6.208,66.957)
N3: (29.905,-5.797,67.215)
N4: (30.566,-4.750,69.170)
C6: (27.261,-5.685,68.147)
C5: (28.258,-5.208,68.890)
O3': (24.548,-9.637,67.154)
OP1: (22.105,-6.432,70.379)
OP2: (24.556,-6.433,71.144)
C4: (29.606,-5.258,68.412)
O5': (23.936,-5.902,68.745)
C3': (25.209,-8.408,67.262)
C1': (26.522,-6.788,66.154)
O4': (25.309,-6.220,66.539)
C5': (23.347,-6.772,67.822)
P: (23.474,-5.873,70.262)
O2: (29.065,-6.820,65.341)
C4': (24.355,-7.260,66.819)
C2': (26.421,-8.296,66.368)
O2': (26.167,-8.899,65.132)
N1: (27.574,-6.208,66.957)
N3: (29.905,-5.797,67.215)
N4: (30.566,-4.750,69.170)
C6: (27.261,-5.685,68.147)
C5: (28.258,-5.208,68.890)
O3': (24.548,-9.637,67.154)
Image (generated by PyMOL):