Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0443:0439
Extra
PDB:
ATOM 1 O3' U A 442 42.862 131.502 62.126 1.00 32.58 O
ATOM 2 P A A 443 43.633 130.838 60.882 1.00 34.67 P
ATOM 3 OP1 A A 443 44.488 129.749 61.420 1.00 32.61 O
ATOM 4 OP2 A A 443 44.250 131.928 60.093 1.00 32.40 O
ATOM 5 O5' A A 443 42.477 130.194 59.994 1.00 33.38 O
ATOM 6 C5' A A 443 41.709 129.071 60.461 1.00 34.74 C
ATOM 7 C4' A A 443 40.796 128.581 59.368 1.00 34.73 C
ATOM 8 O4' A A 443 39.808 129.598 59.068 1.00 36.87 O
ATOM 9 C3' A A 443 41.497 128.324 58.050 1.00 34.56 C
ATOM 10 O3' A A 443 42.023 127.014 58.029 1.00 32.96 O
ATOM 11 C2' A A 443 40.383 128.506 57.033 1.00 36.27 C
ATOM 12 O2' A A 443 39.577 127.353 56.926 1.00 37.46 O
ATOM 13 C1' A A 443 39.570 129.635 57.672 1.00 37.80 C
ATOM 14 N9 A A 443 39.895 130.978 57.189 1.00 39.95 N
ATOM 15 C8 A A 443 40.483 132.004 57.889 1.00 40.73 C
ATOM 16 N7 A A 443 40.626 133.104 57.196 1.00 40.71 N
ATOM 17 C5 A A 443 40.103 132.784 55.955 1.00 41.89 C
ATOM 18 C6 A A 443 39.958 133.526 54.781 1.00 42.68 C
ATOM 19 N6 A A 443 40.328 134.799 54.666 1.00 42.49 N
ATOM 20 N1 A A 443 39.404 132.911 53.715 1.00 43.98 N
ATOM 21 C2 A A 443 39.012 131.634 53.842 1.00 43.14 C
ATOM 22 N3 A A 443 39.087 130.834 54.897 1.00 41.22 N
ATOM 23 C4 A A 443 39.652 131.476 55.933 1.00 41.57 C
ATOM 24 P G A 444 43.458 126.752 57.380 1.00 34.68 P
ATOM 25 OP1 G A 444 43.674 125.279 57.366 1.00 33.35 O
ATOM 26 OP2 G A 444 44.430 127.630 58.068 1.00 33.22 O
ATOM 27 O5' G A 444 43.297 127.267 55.879 1.00 34.20 O
TER
ATOM 1 O3' C B 438 35.899 121.811 51.554 1.00 38.77 O
ATOM 2 P C B 439 34.940 122.835 52.332 1.00 38.57 P
ATOM 3 OP1 C B 439 34.602 122.195 53.628 1.00 35.74 O
ATOM 4 OP2 C B 439 33.851 123.256 51.421 1.00 38.20 O
ATOM 5 O5' C B 439 35.882 124.092 52.598 1.00 36.98 O
ATOM 6 C5' C B 439 37.067 123.963 53.406 1.00 34.30 C
ATOM 7 C4' C B 439 37.709 125.306 53.622 1.00 31.79 C
ATOM 8 O4' C B 439 38.337 125.750 52.404 1.00 32.73 O
ATOM 9 C3' C B 439 36.760 126.428 53.975 1.00 31.39 C
ATOM 10 O3' C B 439 36.471 126.397 55.358 1.00 30.20 O
ATOM 11 C2' C B 439 37.552 127.665 53.581 1.00 33.09 C
ATOM 12 O2' C B 439 38.515 128.025 54.543 1.00 34.76 O
ATOM 13 C1' C B 439 38.305 127.165 52.350 1.00 34.66 C
ATOM 14 N1 C B 439 37.773 127.598 51.041 1.00 37.83 N
ATOM 15 C2 C B 439 38.005 128.907 50.630 1.00 37.00 C
ATOM 16 O2 C B 439 38.604 129.672 51.391 1.00 35.98 O
ATOM 17 N3 C B 439 37.568 129.307 49.413 1.00 38.57 N
ATOM 18 C4 C B 439 36.914 128.454 48.623 1.00 38.64 C
ATOM 19 N4 C B 439 36.519 128.886 47.425 1.00 38.35 N
ATOM 20 C5 C B 439 36.640 127.120 49.024 1.00 39.12 C
ATOM 21 C6 C B 439 37.080 126.735 50.231 1.00 40.30 C
ATOM 22 P G B 440 35.021 126.829 55.874 1.00 31.96 P
ATOM 23 OP1 G B 440 34.998 126.647 57.346 1.00 31.68 O
ATOM 24 OP2 G B 440 34.024 126.135 55.034 1.00 31.89 O
ATOM 25 O5' G B 440 34.953 128.383 55.554 1.00 31.82 O
TER
ATOM 2 P A A 443 43.633 130.838 60.882 1.00 34.67 P
ATOM 3 OP1 A A 443 44.488 129.749 61.420 1.00 32.61 O
ATOM 4 OP2 A A 443 44.250 131.928 60.093 1.00 32.40 O
ATOM 5 O5' A A 443 42.477 130.194 59.994 1.00 33.38 O
ATOM 6 C5' A A 443 41.709 129.071 60.461 1.00 34.74 C
ATOM 7 C4' A A 443 40.796 128.581 59.368 1.00 34.73 C
ATOM 8 O4' A A 443 39.808 129.598 59.068 1.00 36.87 O
ATOM 9 C3' A A 443 41.497 128.324 58.050 1.00 34.56 C
ATOM 10 O3' A A 443 42.023 127.014 58.029 1.00 32.96 O
ATOM 11 C2' A A 443 40.383 128.506 57.033 1.00 36.27 C
ATOM 12 O2' A A 443 39.577 127.353 56.926 1.00 37.46 O
ATOM 13 C1' A A 443 39.570 129.635 57.672 1.00 37.80 C
ATOM 14 N9 A A 443 39.895 130.978 57.189 1.00 39.95 N
ATOM 15 C8 A A 443 40.483 132.004 57.889 1.00 40.73 C
ATOM 16 N7 A A 443 40.626 133.104 57.196 1.00 40.71 N
ATOM 17 C5 A A 443 40.103 132.784 55.955 1.00 41.89 C
ATOM 18 C6 A A 443 39.958 133.526 54.781 1.00 42.68 C
ATOM 19 N6 A A 443 40.328 134.799 54.666 1.00 42.49 N
ATOM 20 N1 A A 443 39.404 132.911 53.715 1.00 43.98 N
ATOM 21 C2 A A 443 39.012 131.634 53.842 1.00 43.14 C
ATOM 22 N3 A A 443 39.087 130.834 54.897 1.00 41.22 N
ATOM 23 C4 A A 443 39.652 131.476 55.933 1.00 41.57 C
ATOM 24 P G A 444 43.458 126.752 57.380 1.00 34.68 P
ATOM 25 OP1 G A 444 43.674 125.279 57.366 1.00 33.35 O
ATOM 26 OP2 G A 444 44.430 127.630 58.068 1.00 33.22 O
ATOM 27 O5' G A 444 43.297 127.267 55.879 1.00 34.20 O
TER
ATOM 1 O3' C B 438 35.899 121.811 51.554 1.00 38.77 O
ATOM 2 P C B 439 34.940 122.835 52.332 1.00 38.57 P
ATOM 3 OP1 C B 439 34.602 122.195 53.628 1.00 35.74 O
ATOM 4 OP2 C B 439 33.851 123.256 51.421 1.00 38.20 O
ATOM 5 O5' C B 439 35.882 124.092 52.598 1.00 36.98 O
ATOM 6 C5' C B 439 37.067 123.963 53.406 1.00 34.30 C
ATOM 7 C4' C B 439 37.709 125.306 53.622 1.00 31.79 C
ATOM 8 O4' C B 439 38.337 125.750 52.404 1.00 32.73 O
ATOM 9 C3' C B 439 36.760 126.428 53.975 1.00 31.39 C
ATOM 10 O3' C B 439 36.471 126.397 55.358 1.00 30.20 O
ATOM 11 C2' C B 439 37.552 127.665 53.581 1.00 33.09 C
ATOM 12 O2' C B 439 38.515 128.025 54.543 1.00 34.76 O
ATOM 13 C1' C B 439 38.305 127.165 52.350 1.00 34.66 C
ATOM 14 N1 C B 439 37.773 127.598 51.041 1.00 37.83 N
ATOM 15 C2 C B 439 38.005 128.907 50.630 1.00 37.00 C
ATOM 16 O2 C B 439 38.604 129.672 51.391 1.00 35.98 O
ATOM 17 N3 C B 439 37.568 129.307 49.413 1.00 38.57 N
ATOM 18 C4 C B 439 36.914 128.454 48.623 1.00 38.64 C
ATOM 19 N4 C B 439 36.519 128.886 47.425 1.00 38.35 N
ATOM 20 C5 C B 439 36.640 127.120 49.024 1.00 39.12 C
ATOM 21 C6 C B 439 37.080 126.735 50.231 1.00 40.30 C
ATOM 22 P G B 440 35.021 126.829 55.874 1.00 31.96 P
ATOM 23 OP1 G B 440 34.998 126.647 57.346 1.00 31.68 O
ATOM 24 OP2 G B 440 34.024 126.135 55.034 1.00 31.89 O
ATOM 25 O5' G B 440 34.953 128.383 55.554 1.00 31.82 O
TER
Atoms:
OP1: (44.488,129.749,61.420)
OP2: (44.250,131.928,60.093)
C3': (41.497,128.324,58.050)
C1': (39.570,129.635,57.672)
C5': (41.709,129.071,60.461)
O4': (39.808,129.598,59.068)
C8: (40.483,132.004,57.889)
O2': (39.577,127.353,56.926)
C6: (39.958,133.526,54.781)
C5: (40.103,132.784,55.955)
C4: (39.652,131.476,55.933)
P: (43.633,130.838,60.882)
C4': (40.796,128.581,59.368)
C2': (40.383,128.506,57.033)
C2: (39.012,131.634,53.842)
N1: (39.404,132.911,53.715)
N3: (39.087,130.834,54.897)
N6: (40.328,134.799,54.666)
N7: (40.626,133.104,57.196)
N9: (39.895,130.978,57.189)
O5': (42.477,130.194,59.994)
O3': (42.023,127.014,58.029)
OP2: (44.250,131.928,60.093)
C3': (41.497,128.324,58.050)
C1': (39.570,129.635,57.672)
C5': (41.709,129.071,60.461)
O4': (39.808,129.598,59.068)
C8: (40.483,132.004,57.889)
O2': (39.577,127.353,56.926)
C6: (39.958,133.526,54.781)
C5: (40.103,132.784,55.955)
C4: (39.652,131.476,55.933)
P: (43.633,130.838,60.882)
C4': (40.796,128.581,59.368)
C2': (40.383,128.506,57.033)
C2: (39.012,131.634,53.842)
N1: (39.404,132.911,53.715)
N3: (39.087,130.834,54.897)
N6: (40.328,134.799,54.666)
N7: (40.626,133.104,57.196)
N9: (39.895,130.978,57.189)
O5': (42.477,130.194,59.994)
O3': (42.023,127.014,58.029)
C2: (38.005,128.907,50.630)
OP1: (34.602,122.195,53.628)
OP2: (33.851,123.256,51.421)
C4: (36.914,128.454,48.623)
O5': (35.882,124.092,52.598)
C3': (36.760,126.428,53.975)
C1': (38.305,127.165,52.350)
O4': (38.337,125.750,52.404)
C5': (37.067,123.963,53.406)
P: (34.940,122.835,52.332)
O2: (38.604,129.672,51.391)
C4': (37.709,125.306,53.622)
C2': (37.552,127.665,53.581)
O2': (38.515,128.025,54.543)
N1: (37.773,127.598,51.041)
N3: (37.568,129.307,49.413)
N4: (36.519,128.886,47.425)
C6: (37.080,126.735,50.231)
C5: (36.640,127.120,49.024)
O3': (36.471,126.397,55.358)
OP1: (34.602,122.195,53.628)
OP2: (33.851,123.256,51.421)
C4: (36.914,128.454,48.623)
O5': (35.882,124.092,52.598)
C3': (36.760,126.428,53.975)
C1': (38.305,127.165,52.350)
O4': (38.337,125.750,52.404)
C5': (37.067,123.963,53.406)
P: (34.940,122.835,52.332)
O2: (38.604,129.672,51.391)
C4': (37.709,125.306,53.622)
C2': (37.552,127.665,53.581)
O2': (38.515,128.025,54.543)
N1: (37.773,127.598,51.041)
N3: (37.568,129.307,49.413)
N4: (36.519,128.886,47.425)
C6: (37.080,126.735,50.231)
C5: (36.640,127.120,49.024)
O3': (36.471,126.397,55.358)
Image (generated by PyMOL):