Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q3Z:V54:V56
Extra
PDB:
ATOM 1 O3' U A 53 -8.478 4.890 20.133 1.00 43.50 O
ATOM 2 P A A 54 -9.118 6.103 19.332 1.00 53.26 P
ATOM 3 OP1 A A 54 -9.828 5.499 18.188 1.00 55.66 O
ATOM 4 OP2 A A 54 -8.094 7.156 19.097 1.00 44.80 O
ATOM 5 O5' A A 54 -10.157 6.695 20.391 1.00 51.17 O
ATOM 6 C5' A A 54 -11.183 5.884 20.940 1.00 50.87 C
ATOM 7 C4' A A 54 -12.544 6.444 20.584 1.00 49.21 C
ATOM 8 O4' A A 54 -12.543 7.882 20.743 1.00 49.03 O
ATOM 9 C3' A A 54 -12.957 6.220 19.143 1.00 48.21 C
ATOM 10 O3' A A 54 -13.506 4.919 19.001 1.00 50.78 O
ATOM 11 C2' A A 54 -13.976 7.332 18.945 1.00 49.00 C
ATOM 12 O2' A A 54 -15.260 6.980 19.410 1.00 51.07 O
ATOM 13 C1' A A 54 -13.417 8.465 19.800 1.00 45.09 C
ATOM 14 N9 A A 54 -12.686 9.504 19.081 1.00 45.56 N
ATOM 15 C8 A A 54 -11.332 9.631 18.951 1.00 49.03 C
ATOM 16 N7 A A 54 -10.959 10.685 18.263 1.00 52.60 N
ATOM 17 C5 A A 54 -12.148 11.298 17.918 1.00 48.75 C
ATOM 18 C6 A A 54 -12.437 12.471 17.187 1.00 50.86 C
ATOM 19 N6 A A 54 -11.499 13.251 16.645 1.00 49.51 N
ATOM 20 N1 A A 54 -13.732 12.808 17.024 1.00 48.76 N
ATOM 21 C2 A A 54 -14.669 12.020 17.568 1.00 50.00 C
ATOM 22 N3 A A 54 -14.517 10.895 18.273 1.00 48.13 N
ATOM 23 C4 A A 54 -13.221 10.584 18.415 1.00 47.13 C
ATOM 24 P G A 55 -13.449 4.114 17.621 1.00 51.93 P
ATOM 25 OP1 G A 55 -14.117 2.810 17.834 1.00 63.55 O
ATOM 26 OP2 G A 55 -12.064 4.153 17.116 1.00 52.80 O
ATOM 27 O5' G A 55 -14.354 4.996 16.651 1.00 54.38 O
TER
ATOM 1 O3' G B 55 -16.856 4.970 13.767 1.00 56.75 O
ATOM 2 P U B 56 -16.204 3.712 13.031 1.00 57.66 P
ATOM 3 OP1 U B 56 -17.296 2.963 12.376 1.00 55.33 O
ATOM 4 OP2 U B 56 -15.292 3.028 13.977 1.00 55.14 O
ATOM 5 O5' U B 56 -15.286 4.395 11.914 1.00 59.29 O
ATOM 6 C5' U B 56 -15.825 5.352 11.005 1.00 60.87 C
ATOM 7 C4' U B 56 -14.729 6.086 10.251 1.00 57.53 C
ATOM 8 O4' U B 56 -14.006 6.976 11.137 1.00 61.05 O
ATOM 9 C3' U B 56 -13.661 5.194 9.650 1.00 57.80 C
ATOM 10 O3' U B 56 -14.107 4.703 8.397 1.00 58.35 O
ATOM 11 C2' U B 56 -12.474 6.144 9.543 1.00 58.72 C
ATOM 12 O2' U B 56 -12.528 6.985 8.406 1.00 64.78 O
ATOM 13 C1' U B 56 -12.623 6.958 10.824 1.00 56.70 C
ATOM 14 N1 U B 56 -11.863 6.418 12.011 1.00 54.25 N
ATOM 15 C2 U B 56 -10.621 6.941 12.319 1.00 52.27 C
ATOM 16 O2 U B 56 -10.087 7.819 11.668 1.00 51.30 O
ATOM 17 N3 U B 56 -10.015 6.388 13.425 1.00 49.06 N
ATOM 18 C4 U B 56 -10.514 5.386 14.240 1.00 49.04 C
ATOM 19 O4 U B 56 -9.856 4.985 15.200 1.00 49.05 O
ATOM 20 C5 U B 56 -11.812 4.890 13.863 1.00 48.98 C
ATOM 21 C6 U B 56 -12.417 5.414 12.790 1.00 52.65 C
ATOM 22 P A B 57 -13.879 3.175 8.022 1.00 60.74 P
ATOM 23 OP1 A B 57 -14.461 2.924 6.681 1.00 63.28 O
ATOM 24 OP2 A B 57 -14.281 2.340 9.174 1.00 58.34 O
ATOM 25 O5' A B 57 -12.292 3.146 7.896 1.00 62.45 O
TER
ATOM 2 P A A 54 -9.118 6.103 19.332 1.00 53.26 P
ATOM 3 OP1 A A 54 -9.828 5.499 18.188 1.00 55.66 O
ATOM 4 OP2 A A 54 -8.094 7.156 19.097 1.00 44.80 O
ATOM 5 O5' A A 54 -10.157 6.695 20.391 1.00 51.17 O
ATOM 6 C5' A A 54 -11.183 5.884 20.940 1.00 50.87 C
ATOM 7 C4' A A 54 -12.544 6.444 20.584 1.00 49.21 C
ATOM 8 O4' A A 54 -12.543 7.882 20.743 1.00 49.03 O
ATOM 9 C3' A A 54 -12.957 6.220 19.143 1.00 48.21 C
ATOM 10 O3' A A 54 -13.506 4.919 19.001 1.00 50.78 O
ATOM 11 C2' A A 54 -13.976 7.332 18.945 1.00 49.00 C
ATOM 12 O2' A A 54 -15.260 6.980 19.410 1.00 51.07 O
ATOM 13 C1' A A 54 -13.417 8.465 19.800 1.00 45.09 C
ATOM 14 N9 A A 54 -12.686 9.504 19.081 1.00 45.56 N
ATOM 15 C8 A A 54 -11.332 9.631 18.951 1.00 49.03 C
ATOM 16 N7 A A 54 -10.959 10.685 18.263 1.00 52.60 N
ATOM 17 C5 A A 54 -12.148 11.298 17.918 1.00 48.75 C
ATOM 18 C6 A A 54 -12.437 12.471 17.187 1.00 50.86 C
ATOM 19 N6 A A 54 -11.499 13.251 16.645 1.00 49.51 N
ATOM 20 N1 A A 54 -13.732 12.808 17.024 1.00 48.76 N
ATOM 21 C2 A A 54 -14.669 12.020 17.568 1.00 50.00 C
ATOM 22 N3 A A 54 -14.517 10.895 18.273 1.00 48.13 N
ATOM 23 C4 A A 54 -13.221 10.584 18.415 1.00 47.13 C
ATOM 24 P G A 55 -13.449 4.114 17.621 1.00 51.93 P
ATOM 25 OP1 G A 55 -14.117 2.810 17.834 1.00 63.55 O
ATOM 26 OP2 G A 55 -12.064 4.153 17.116 1.00 52.80 O
ATOM 27 O5' G A 55 -14.354 4.996 16.651 1.00 54.38 O
TER
ATOM 1 O3' G B 55 -16.856 4.970 13.767 1.00 56.75 O
ATOM 2 P U B 56 -16.204 3.712 13.031 1.00 57.66 P
ATOM 3 OP1 U B 56 -17.296 2.963 12.376 1.00 55.33 O
ATOM 4 OP2 U B 56 -15.292 3.028 13.977 1.00 55.14 O
ATOM 5 O5' U B 56 -15.286 4.395 11.914 1.00 59.29 O
ATOM 6 C5' U B 56 -15.825 5.352 11.005 1.00 60.87 C
ATOM 7 C4' U B 56 -14.729 6.086 10.251 1.00 57.53 C
ATOM 8 O4' U B 56 -14.006 6.976 11.137 1.00 61.05 O
ATOM 9 C3' U B 56 -13.661 5.194 9.650 1.00 57.80 C
ATOM 10 O3' U B 56 -14.107 4.703 8.397 1.00 58.35 O
ATOM 11 C2' U B 56 -12.474 6.144 9.543 1.00 58.72 C
ATOM 12 O2' U B 56 -12.528 6.985 8.406 1.00 64.78 O
ATOM 13 C1' U B 56 -12.623 6.958 10.824 1.00 56.70 C
ATOM 14 N1 U B 56 -11.863 6.418 12.011 1.00 54.25 N
ATOM 15 C2 U B 56 -10.621 6.941 12.319 1.00 52.27 C
ATOM 16 O2 U B 56 -10.087 7.819 11.668 1.00 51.30 O
ATOM 17 N3 U B 56 -10.015 6.388 13.425 1.00 49.06 N
ATOM 18 C4 U B 56 -10.514 5.386 14.240 1.00 49.04 C
ATOM 19 O4 U B 56 -9.856 4.985 15.200 1.00 49.05 O
ATOM 20 C5 U B 56 -11.812 4.890 13.863 1.00 48.98 C
ATOM 21 C6 U B 56 -12.417 5.414 12.790 1.00 52.65 C
ATOM 22 P A B 57 -13.879 3.175 8.022 1.00 60.74 P
ATOM 23 OP1 A B 57 -14.461 2.924 6.681 1.00 63.28 O
ATOM 24 OP2 A B 57 -14.281 2.340 9.174 1.00 58.34 O
ATOM 25 O5' A B 57 -12.292 3.146 7.896 1.00 62.45 O
TER
Atoms:
OP1: (-9.828,5.499,18.188)
OP2: (-8.094,7.156,19.097)
C3': (-12.957,6.220,19.143)
C1': (-13.417,8.465,19.800)
C5': (-11.183,5.884,20.940)
O4': (-12.543,7.882,20.743)
C8: (-11.332,9.631,18.951)
O2': (-15.260,6.980,19.410)
C6: (-12.437,12.471,17.187)
C5: (-12.148,11.298,17.918)
C4: (-13.221,10.584,18.415)
P: (-9.118,6.103,19.332)
C4': (-12.544,6.444,20.584)
C2': (-13.976,7.332,18.945)
C2: (-14.669,12.020,17.568)
N1: (-13.732,12.808,17.024)
N3: (-14.517,10.895,18.273)
N6: (-11.499,13.251,16.645)
N7: (-10.959,10.685,18.263)
N9: (-12.686,9.504,19.081)
O5': (-10.157,6.695,20.391)
O3': (-13.506,4.919,19.001)
OP2: (-8.094,7.156,19.097)
C3': (-12.957,6.220,19.143)
C1': (-13.417,8.465,19.800)
C5': (-11.183,5.884,20.940)
O4': (-12.543,7.882,20.743)
C8: (-11.332,9.631,18.951)
O2': (-15.260,6.980,19.410)
C6: (-12.437,12.471,17.187)
C5: (-12.148,11.298,17.918)
C4: (-13.221,10.584,18.415)
P: (-9.118,6.103,19.332)
C4': (-12.544,6.444,20.584)
C2': (-13.976,7.332,18.945)
C2: (-14.669,12.020,17.568)
N1: (-13.732,12.808,17.024)
N3: (-14.517,10.895,18.273)
N6: (-11.499,13.251,16.645)
N7: (-10.959,10.685,18.263)
N9: (-12.686,9.504,19.081)
O5': (-10.157,6.695,20.391)
O3': (-13.506,4.919,19.001)
C4: (-10.514,5.386,14.240)
N3: (-10.015,6.388,13.425)
OP1: (-17.296,2.963,12.376)
OP2: (-15.292,3.028,13.977)
C2: (-10.621,6.941,12.319)
C1': (-12.623,6.958,10.824)
C3': (-13.661,5.194,9.650)
O5': (-15.286,4.395,11.914)
O4': (-14.006,6.976,11.137)
C5': (-15.825,5.352,11.005)
P: (-16.204,3.712,13.031)
C4': (-14.729,6.086,10.251)
C2': (-12.474,6.144,9.543)
O2': (-12.528,6.985,8.406)
N1: (-11.863,6.418,12.011)
O4: (-9.856,4.985,15.200)
O2: (-10.087,7.819,11.668)
C6: (-12.417,5.414,12.790)
C5: (-11.812,4.890,13.863)
O3': (-14.107,4.703,8.397)
N3: (-10.015,6.388,13.425)
OP1: (-17.296,2.963,12.376)
OP2: (-15.292,3.028,13.977)
C2: (-10.621,6.941,12.319)
C1': (-12.623,6.958,10.824)
C3': (-13.661,5.194,9.650)
O5': (-15.286,4.395,11.914)
O4': (-14.006,6.976,11.137)
C5': (-15.825,5.352,11.005)
P: (-16.204,3.712,13.031)
C4': (-14.729,6.086,10.251)
C2': (-12.474,6.144,9.543)
O2': (-12.528,6.985,8.406)
N1: (-11.863,6.418,12.011)
O4: (-9.856,4.985,15.200)
O2: (-10.087,7.819,11.668)
C6: (-12.417,5.414,12.790)
C5: (-11.812,4.890,13.863)
O3': (-14.107,4.703,8.397)
Image (generated by PyMOL):