Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:01040:01028
Extra
PDB:
ATOM 1 O3' C A1039 37.426 105.812 103.009 1.00 53.66 O
ATOM 2 P A A1040 38.003 106.583 101.729 1.00 54.42 P
ATOM 3 OP1 A A1040 39.225 107.326 102.140 1.00 54.99 O
ATOM 4 OP2 A A1040 36.890 107.300 101.056 1.00 54.07 O
ATOM 5 O5' A A1040 38.463 105.375 100.802 1.00 51.98 O
ATOM 6 C5' A A1040 38.676 104.075 101.370 1.00 47.91 C
ATOM 7 C4' A A1040 38.639 103.027 100.295 1.00 46.62 C
ATOM 8 O4' A A1040 39.693 103.281 99.346 1.00 45.41 O
ATOM 9 C3' A A1040 38.902 101.613 100.773 1.00 46.01 C
ATOM 10 O3' A A1040 37.674 101.048 101.197 1.00 46.73 O
ATOM 11 C2' A A1040 39.381 100.932 99.504 1.00 44.83 C
ATOM 12 O2' A A1040 38.289 100.631 98.669 1.00 45.08 O
ATOM 13 C1' A A1040 40.172 102.057 98.837 1.00 44.40 C
ATOM 14 N9 A A1040 41.621 102.021 99.015 1.00 43.57 N
ATOM 15 C8 A A1040 42.371 102.606 100.000 1.00 43.02 C
ATOM 16 N7 A A1040 43.657 102.416 99.864 1.00 43.83 N
ATOM 17 C5 A A1040 43.761 101.646 98.715 1.00 43.89 C
ATOM 18 C6 A A1040 44.863 101.093 98.036 1.00 43.75 C
ATOM 19 N6 A A1040 46.128 101.223 98.440 1.00 43.96 N
ATOM 20 N1 A A1040 44.616 100.380 96.917 1.00 43.96 N
ATOM 21 C2 A A1040 43.349 100.222 96.525 1.00 42.90 C
ATOM 22 N3 A A1040 42.237 100.680 97.082 1.00 43.02 N
ATOM 23 C4 A A1040 42.515 101.394 98.185 1.00 43.32 C
ATOM 24 P A A1041 37.424 100.726 102.747 1.00 47.55 P
ATOM 25 OP1 A A1041 35.978 101.008 102.962 1.00 47.92 O
ATOM 26 OP2 A A1041 38.442 101.375 103.615 1.00 46.86 O
ATOM 27 O5' A A1041 37.631 99.156 102.807 1.00 46.05 O
TER
ATOM 1 O3' C B1027 35.367 94.127 96.984 1.00 39.44 O
ATOM 2 P C B1028 35.264 95.145 95.753 1.00 37.70 P
ATOM 3 OP1 C B1028 34.046 95.978 95.954 1.00 36.05 O
ATOM 4 OP2 C B1028 35.424 94.360 94.504 1.00 36.70 O
ATOM 5 O5' C B1028 36.540 96.072 95.936 1.00 36.69 O
ATOM 6 C5' C B1028 36.554 97.094 96.938 1.00 36.08 C
ATOM 7 C4' C B1028 37.800 97.922 96.809 1.00 36.01 C
ATOM 8 O4' C B1028 38.954 97.113 97.144 1.00 36.70 O
ATOM 9 C3' C B1028 38.100 98.430 95.411 1.00 35.43 C
ATOM 10 O3' C B1028 37.378 99.620 95.140 1.00 34.96 O
ATOM 11 C2' C B1028 39.588 98.696 95.499 1.00 35.42 C
ATOM 12 O2' C B1028 39.823 99.858 96.250 1.00 35.35 O
ATOM 13 C1' C B1028 40.048 97.510 96.343 1.00 36.18 C
ATOM 14 N1 C B1028 40.467 96.360 95.536 1.00 36.42 N
ATOM 15 C2 C B1028 41.773 96.323 95.072 1.00 36.76 C
ATOM 16 O2 C B1028 42.516 97.291 95.311 1.00 37.58 O
ATOM 17 N3 C B1028 42.195 95.246 94.370 1.00 35.85 N
ATOM 18 C4 C B1028 41.351 94.245 94.118 1.00 35.38 C
ATOM 19 N4 C B1028 41.810 93.194 93.438 1.00 34.94 N
ATOM 20 C5 C B1028 40.001 94.275 94.555 1.00 35.28 C
ATOM 21 C6 C B1028 39.604 95.341 95.255 1.00 35.50 C
ATOM 22 P A B1029 37.049 100.017 93.624 1.00 34.26 P
ATOM 23 OP1 A B1029 36.479 101.391 93.623 1.00 34.29 O
ATOM 24 OP2 A B1029 36.284 98.915 93.023 1.00 34.17 O
ATOM 25 O5' A B1029 38.481 100.032 92.923 1.00 34.63 O
TER
ATOM 2 P A A1040 38.003 106.583 101.729 1.00 54.42 P
ATOM 3 OP1 A A1040 39.225 107.326 102.140 1.00 54.99 O
ATOM 4 OP2 A A1040 36.890 107.300 101.056 1.00 54.07 O
ATOM 5 O5' A A1040 38.463 105.375 100.802 1.00 51.98 O
ATOM 6 C5' A A1040 38.676 104.075 101.370 1.00 47.91 C
ATOM 7 C4' A A1040 38.639 103.027 100.295 1.00 46.62 C
ATOM 8 O4' A A1040 39.693 103.281 99.346 1.00 45.41 O
ATOM 9 C3' A A1040 38.902 101.613 100.773 1.00 46.01 C
ATOM 10 O3' A A1040 37.674 101.048 101.197 1.00 46.73 O
ATOM 11 C2' A A1040 39.381 100.932 99.504 1.00 44.83 C
ATOM 12 O2' A A1040 38.289 100.631 98.669 1.00 45.08 O
ATOM 13 C1' A A1040 40.172 102.057 98.837 1.00 44.40 C
ATOM 14 N9 A A1040 41.621 102.021 99.015 1.00 43.57 N
ATOM 15 C8 A A1040 42.371 102.606 100.000 1.00 43.02 C
ATOM 16 N7 A A1040 43.657 102.416 99.864 1.00 43.83 N
ATOM 17 C5 A A1040 43.761 101.646 98.715 1.00 43.89 C
ATOM 18 C6 A A1040 44.863 101.093 98.036 1.00 43.75 C
ATOM 19 N6 A A1040 46.128 101.223 98.440 1.00 43.96 N
ATOM 20 N1 A A1040 44.616 100.380 96.917 1.00 43.96 N
ATOM 21 C2 A A1040 43.349 100.222 96.525 1.00 42.90 C
ATOM 22 N3 A A1040 42.237 100.680 97.082 1.00 43.02 N
ATOM 23 C4 A A1040 42.515 101.394 98.185 1.00 43.32 C
ATOM 24 P A A1041 37.424 100.726 102.747 1.00 47.55 P
ATOM 25 OP1 A A1041 35.978 101.008 102.962 1.00 47.92 O
ATOM 26 OP2 A A1041 38.442 101.375 103.615 1.00 46.86 O
ATOM 27 O5' A A1041 37.631 99.156 102.807 1.00 46.05 O
TER
ATOM 1 O3' C B1027 35.367 94.127 96.984 1.00 39.44 O
ATOM 2 P C B1028 35.264 95.145 95.753 1.00 37.70 P
ATOM 3 OP1 C B1028 34.046 95.978 95.954 1.00 36.05 O
ATOM 4 OP2 C B1028 35.424 94.360 94.504 1.00 36.70 O
ATOM 5 O5' C B1028 36.540 96.072 95.936 1.00 36.69 O
ATOM 6 C5' C B1028 36.554 97.094 96.938 1.00 36.08 C
ATOM 7 C4' C B1028 37.800 97.922 96.809 1.00 36.01 C
ATOM 8 O4' C B1028 38.954 97.113 97.144 1.00 36.70 O
ATOM 9 C3' C B1028 38.100 98.430 95.411 1.00 35.43 C
ATOM 10 O3' C B1028 37.378 99.620 95.140 1.00 34.96 O
ATOM 11 C2' C B1028 39.588 98.696 95.499 1.00 35.42 C
ATOM 12 O2' C B1028 39.823 99.858 96.250 1.00 35.35 O
ATOM 13 C1' C B1028 40.048 97.510 96.343 1.00 36.18 C
ATOM 14 N1 C B1028 40.467 96.360 95.536 1.00 36.42 N
ATOM 15 C2 C B1028 41.773 96.323 95.072 1.00 36.76 C
ATOM 16 O2 C B1028 42.516 97.291 95.311 1.00 37.58 O
ATOM 17 N3 C B1028 42.195 95.246 94.370 1.00 35.85 N
ATOM 18 C4 C B1028 41.351 94.245 94.118 1.00 35.38 C
ATOM 19 N4 C B1028 41.810 93.194 93.438 1.00 34.94 N
ATOM 20 C5 C B1028 40.001 94.275 94.555 1.00 35.28 C
ATOM 21 C6 C B1028 39.604 95.341 95.255 1.00 35.50 C
ATOM 22 P A B1029 37.049 100.017 93.624 1.00 34.26 P
ATOM 23 OP1 A B1029 36.479 101.391 93.623 1.00 34.29 O
ATOM 24 OP2 A B1029 36.284 98.915 93.023 1.00 34.17 O
ATOM 25 O5' A B1029 38.481 100.032 92.923 1.00 34.63 O
TER
Atoms:
OP1: (39.225,107.326,102.140)
OP2: (36.890,107.300,101.056)
C3': (38.902,101.613,100.773)
C1': (40.172,102.057,98.837)
C5': (38.676,104.075,101.370)
O4': (39.693,103.281,99.346)
C8: (42.371,102.606,100.000)
O2': (38.289,100.631,98.669)
C6: (44.863,101.093,98.036)
C5: (43.761,101.646,98.715)
C4: (42.515,101.394,98.185)
P: (38.003,106.583,101.729)
C4': (38.639,103.027,100.295)
C2': (39.381,100.932,99.504)
C2: (43.349,100.222,96.525)
N1: (44.616,100.380,96.917)
N3: (42.237,100.680,97.082)
N6: (46.128,101.223,98.440)
N7: (43.657,102.416,99.864)
N9: (41.621,102.021,99.015)
O5': (38.463,105.375,100.802)
O3': (37.674,101.048,101.197)
OP2: (36.890,107.300,101.056)
C3': (38.902,101.613,100.773)
C1': (40.172,102.057,98.837)
C5': (38.676,104.075,101.370)
O4': (39.693,103.281,99.346)
C8: (42.371,102.606,100.000)
O2': (38.289,100.631,98.669)
C6: (44.863,101.093,98.036)
C5: (43.761,101.646,98.715)
C4: (42.515,101.394,98.185)
P: (38.003,106.583,101.729)
C4': (38.639,103.027,100.295)
C2': (39.381,100.932,99.504)
C2: (43.349,100.222,96.525)
N1: (44.616,100.380,96.917)
N3: (42.237,100.680,97.082)
N6: (46.128,101.223,98.440)
N7: (43.657,102.416,99.864)
N9: (41.621,102.021,99.015)
O5': (38.463,105.375,100.802)
O3': (37.674,101.048,101.197)
C2: (41.773,96.323,95.072)
OP1: (34.046,95.978,95.954)
OP2: (35.424,94.360,94.504)
C4: (41.351,94.245,94.118)
O5': (36.540,96.072,95.936)
C3': (38.100,98.430,95.411)
C1': (40.048,97.510,96.343)
O4': (38.954,97.113,97.144)
C5': (36.554,97.094,96.938)
P: (35.264,95.145,95.753)
O2: (42.516,97.291,95.311)
C4': (37.800,97.922,96.809)
C2': (39.588,98.696,95.499)
O2': (39.823,99.858,96.250)
N1: (40.467,96.360,95.536)
N3: (42.195,95.246,94.370)
N4: (41.810,93.194,93.438)
C6: (39.604,95.341,95.255)
C5: (40.001,94.275,94.555)
O3': (37.378,99.620,95.140)
OP1: (34.046,95.978,95.954)
OP2: (35.424,94.360,94.504)
C4: (41.351,94.245,94.118)
O5': (36.540,96.072,95.936)
C3': (38.100,98.430,95.411)
C1': (40.048,97.510,96.343)
O4': (38.954,97.113,97.144)
C5': (36.554,97.094,96.938)
P: (35.264,95.145,95.753)
O2: (42.516,97.291,95.311)
C4': (37.800,97.922,96.809)
C2': (39.588,98.696,95.499)
O2': (39.823,99.858,96.250)
N1: (40.467,96.360,95.536)
N3: (42.195,95.246,94.370)
N4: (41.810,93.194,93.438)
C6: (39.604,95.341,95.255)
C5: (40.001,94.275,94.555)
O3': (37.378,99.620,95.140)
Image (generated by PyMOL):