Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q3Z:A54:A56
Extra
PDB:
ATOM 1 O3' U A 53 -2.502 7.773 -26.330 1.00 52.20 O
ATOM 2 P A A 54 -1.950 8.800 -25.257 1.00 52.70 P
ATOM 3 OP1 A A 54 -1.260 8.024 -24.206 1.00 57.42 O
ATOM 4 OP2 A A 54 -3.029 9.742 -24.910 1.00 45.19 O
ATOM 5 O5' A A 54 -0.888 9.612 -26.129 1.00 60.20 O
ATOM 6 C5' A A 54 0.102 8.929 -26.883 1.00 56.04 C
ATOM 7 C4' A A 54 1.466 9.470 -26.516 1.00 57.06 C
ATOM 8 O4' A A 54 1.425 10.914 -26.536 1.00 47.88 O
ATOM 9 C3' A A 54 1.926 9.114 -25.112 1.00 55.92 C
ATOM 10 O3' A A 54 2.553 7.837 -25.121 1.00 55.52 O
ATOM 11 C2' A A 54 2.888 10.249 -24.785 1.00 53.56 C
ATOM 12 O2' A A 54 4.213 9.976 -25.198 1.00 55.02 O
ATOM 13 C1' A A 54 2.314 11.432 -25.569 1.00 51.45 C
ATOM 14 N9 A A 54 1.578 12.413 -24.772 1.00 56.30 N
ATOM 15 C8 A A 54 0.219 12.526 -24.654 1.00 58.15 C
ATOM 16 N7 A A 54 -0.168 13.512 -23.885 1.00 56.31 N
ATOM 17 C5 A A 54 1.013 14.094 -23.465 1.00 53.62 C
ATOM 18 C6 A A 54 1.279 15.200 -22.625 1.00 60.15 C
ATOM 19 N6 A A 54 0.316 15.922 -22.037 1.00 55.45 N
ATOM 20 N1 A A 54 2.576 15.528 -22.406 1.00 58.12 N
ATOM 21 C2 A A 54 3.530 14.792 -23.002 1.00 61.25 C
ATOM 22 N3 A A 54 3.401 13.732 -23.813 1.00 56.00 N
ATOM 23 C4 A A 54 2.103 13.432 -24.006 1.00 56.53 C
ATOM 24 P G A 55 2.519 6.874 -23.850 1.00 54.82 P
ATOM 25 OP1 G A 55 3.195 5.616 -24.233 1.00 60.35 O
ATOM 26 OP2 G A 55 1.142 6.842 -23.305 1.00 55.44 O
ATOM 27 O5' G A 55 3.430 7.640 -22.793 1.00 51.77 O
TER
ATOM 1 O3' G B 55 6.083 7.442 -19.977 1.00 53.93 O
ATOM 2 P U B 56 5.549 6.152 -19.196 1.00 59.35 P
ATOM 3 OP1 U B 56 6.682 5.504 -18.502 1.00 64.66 O
ATOM 4 OP2 U B 56 4.712 5.360 -20.134 1.00 54.14 O
ATOM 5 O5' U B 56 4.579 6.787 -18.093 1.00 59.78 O
ATOM 6 C5' U B 56 5.046 7.686 -17.095 1.00 54.94 C
ATOM 7 C4' U B 56 3.886 8.265 -16.292 1.00 58.54 C
ATOM 8 O4' U B 56 3.098 9.191 -17.091 1.00 56.11 O
ATOM 9 C3' U B 56 2.870 7.251 -15.787 1.00 55.26 C
ATOM 10 O3' U B 56 3.349 6.665 -14.591 1.00 58.15 O
ATOM 11 C2' U B 56 1.633 8.119 -15.577 1.00 55.84 C
ATOM 12 O2' U B 56 1.646 8.827 -14.356 1.00 61.18 O
ATOM 13 C1' U B 56 1.723 9.089 -16.748 1.00 52.57 C
ATOM 14 N1 U B 56 0.955 8.655 -17.961 1.00 53.33 N
ATOM 15 C2 U B 56 -0.312 9.159 -18.199 1.00 53.79 C
ATOM 16 O2 U B 56 -0.867 9.955 -17.466 1.00 57.25 O
ATOM 17 N3 U B 56 -0.913 8.696 -19.345 1.00 45.65 N
ATOM 18 C4 U B 56 -0.388 7.799 -20.258 1.00 52.84 C
ATOM 19 O4 U B 56 -1.033 7.466 -21.252 1.00 58.17 O
ATOM 20 C5 U B 56 0.928 7.320 -19.944 1.00 52.40 C
ATOM 21 C6 U B 56 1.531 7.759 -18.838 1.00 47.30 C
ATOM 22 P A B 57 3.182 5.106 -14.304 1.00 56.29 P
ATOM 23 OP1 A B 57 4.098 4.759 -13.200 1.00 57.89 O
ATOM 24 OP2 A B 57 3.245 4.373 -15.591 1.00 58.81 O
ATOM 25 O5' A B 57 1.695 5.045 -13.738 1.00 58.92 O
TER
ATOM 2 P A A 54 -1.950 8.800 -25.257 1.00 52.70 P
ATOM 3 OP1 A A 54 -1.260 8.024 -24.206 1.00 57.42 O
ATOM 4 OP2 A A 54 -3.029 9.742 -24.910 1.00 45.19 O
ATOM 5 O5' A A 54 -0.888 9.612 -26.129 1.00 60.20 O
ATOM 6 C5' A A 54 0.102 8.929 -26.883 1.00 56.04 C
ATOM 7 C4' A A 54 1.466 9.470 -26.516 1.00 57.06 C
ATOM 8 O4' A A 54 1.425 10.914 -26.536 1.00 47.88 O
ATOM 9 C3' A A 54 1.926 9.114 -25.112 1.00 55.92 C
ATOM 10 O3' A A 54 2.553 7.837 -25.121 1.00 55.52 O
ATOM 11 C2' A A 54 2.888 10.249 -24.785 1.00 53.56 C
ATOM 12 O2' A A 54 4.213 9.976 -25.198 1.00 55.02 O
ATOM 13 C1' A A 54 2.314 11.432 -25.569 1.00 51.45 C
ATOM 14 N9 A A 54 1.578 12.413 -24.772 1.00 56.30 N
ATOM 15 C8 A A 54 0.219 12.526 -24.654 1.00 58.15 C
ATOM 16 N7 A A 54 -0.168 13.512 -23.885 1.00 56.31 N
ATOM 17 C5 A A 54 1.013 14.094 -23.465 1.00 53.62 C
ATOM 18 C6 A A 54 1.279 15.200 -22.625 1.00 60.15 C
ATOM 19 N6 A A 54 0.316 15.922 -22.037 1.00 55.45 N
ATOM 20 N1 A A 54 2.576 15.528 -22.406 1.00 58.12 N
ATOM 21 C2 A A 54 3.530 14.792 -23.002 1.00 61.25 C
ATOM 22 N3 A A 54 3.401 13.732 -23.813 1.00 56.00 N
ATOM 23 C4 A A 54 2.103 13.432 -24.006 1.00 56.53 C
ATOM 24 P G A 55 2.519 6.874 -23.850 1.00 54.82 P
ATOM 25 OP1 G A 55 3.195 5.616 -24.233 1.00 60.35 O
ATOM 26 OP2 G A 55 1.142 6.842 -23.305 1.00 55.44 O
ATOM 27 O5' G A 55 3.430 7.640 -22.793 1.00 51.77 O
TER
ATOM 1 O3' G B 55 6.083 7.442 -19.977 1.00 53.93 O
ATOM 2 P U B 56 5.549 6.152 -19.196 1.00 59.35 P
ATOM 3 OP1 U B 56 6.682 5.504 -18.502 1.00 64.66 O
ATOM 4 OP2 U B 56 4.712 5.360 -20.134 1.00 54.14 O
ATOM 5 O5' U B 56 4.579 6.787 -18.093 1.00 59.78 O
ATOM 6 C5' U B 56 5.046 7.686 -17.095 1.00 54.94 C
ATOM 7 C4' U B 56 3.886 8.265 -16.292 1.00 58.54 C
ATOM 8 O4' U B 56 3.098 9.191 -17.091 1.00 56.11 O
ATOM 9 C3' U B 56 2.870 7.251 -15.787 1.00 55.26 C
ATOM 10 O3' U B 56 3.349 6.665 -14.591 1.00 58.15 O
ATOM 11 C2' U B 56 1.633 8.119 -15.577 1.00 55.84 C
ATOM 12 O2' U B 56 1.646 8.827 -14.356 1.00 61.18 O
ATOM 13 C1' U B 56 1.723 9.089 -16.748 1.00 52.57 C
ATOM 14 N1 U B 56 0.955 8.655 -17.961 1.00 53.33 N
ATOM 15 C2 U B 56 -0.312 9.159 -18.199 1.00 53.79 C
ATOM 16 O2 U B 56 -0.867 9.955 -17.466 1.00 57.25 O
ATOM 17 N3 U B 56 -0.913 8.696 -19.345 1.00 45.65 N
ATOM 18 C4 U B 56 -0.388 7.799 -20.258 1.00 52.84 C
ATOM 19 O4 U B 56 -1.033 7.466 -21.252 1.00 58.17 O
ATOM 20 C5 U B 56 0.928 7.320 -19.944 1.00 52.40 C
ATOM 21 C6 U B 56 1.531 7.759 -18.838 1.00 47.30 C
ATOM 22 P A B 57 3.182 5.106 -14.304 1.00 56.29 P
ATOM 23 OP1 A B 57 4.098 4.759 -13.200 1.00 57.89 O
ATOM 24 OP2 A B 57 3.245 4.373 -15.591 1.00 58.81 O
ATOM 25 O5' A B 57 1.695 5.045 -13.738 1.00 58.92 O
TER
Atoms:
OP1: (-1.260,8.024,-24.206)
OP2: (-3.029,9.742,-24.910)
C3': (1.926,9.114,-25.112)
C1': (2.314,11.432,-25.569)
C5': (0.102,8.929,-26.883)
O4': (1.425,10.914,-26.536)
C8: (0.219,12.526,-24.654)
O2': (4.213,9.976,-25.198)
C6: (1.279,15.200,-22.625)
C5: (1.013,14.094,-23.465)
C4: (2.103,13.432,-24.006)
P: (-1.950,8.800,-25.257)
C4': (1.466,9.470,-26.516)
C2': (2.888,10.249,-24.785)
C2: (3.530,14.792,-23.002)
N1: (2.576,15.528,-22.406)
N3: (3.401,13.732,-23.813)
N6: (0.316,15.922,-22.037)
N7: (-0.168,13.512,-23.885)
N9: (1.578,12.413,-24.772)
O5': (-0.888,9.612,-26.129)
O3': (2.553,7.837,-25.121)
OP2: (-3.029,9.742,-24.910)
C3': (1.926,9.114,-25.112)
C1': (2.314,11.432,-25.569)
C5': (0.102,8.929,-26.883)
O4': (1.425,10.914,-26.536)
C8: (0.219,12.526,-24.654)
O2': (4.213,9.976,-25.198)
C6: (1.279,15.200,-22.625)
C5: (1.013,14.094,-23.465)
C4: (2.103,13.432,-24.006)
P: (-1.950,8.800,-25.257)
C4': (1.466,9.470,-26.516)
C2': (2.888,10.249,-24.785)
C2: (3.530,14.792,-23.002)
N1: (2.576,15.528,-22.406)
N3: (3.401,13.732,-23.813)
N6: (0.316,15.922,-22.037)
N7: (-0.168,13.512,-23.885)
N9: (1.578,12.413,-24.772)
O5': (-0.888,9.612,-26.129)
O3': (2.553,7.837,-25.121)
C4: (-0.388,7.799,-20.258)
N3: (-0.913,8.696,-19.345)
OP1: (6.682,5.504,-18.502)
OP2: (4.712,5.360,-20.134)
C2: (-0.312,9.159,-18.199)
C1': (1.723,9.089,-16.748)
C3': (2.870,7.251,-15.787)
O5': (4.579,6.787,-18.093)
O4': (3.098,9.191,-17.091)
C5': (5.046,7.686,-17.095)
P: (5.549,6.152,-19.196)
C4': (3.886,8.265,-16.292)
C2': (1.633,8.119,-15.577)
O2': (1.646,8.827,-14.356)
N1: (0.955,8.655,-17.961)
O4: (-1.033,7.466,-21.252)
O2: (-0.867,9.955,-17.466)
C6: (1.531,7.759,-18.838)
C5: (0.928,7.320,-19.944)
O3': (3.349,6.665,-14.591)
N3: (-0.913,8.696,-19.345)
OP1: (6.682,5.504,-18.502)
OP2: (4.712,5.360,-20.134)
C2: (-0.312,9.159,-18.199)
C1': (1.723,9.089,-16.748)
C3': (2.870,7.251,-15.787)
O5': (4.579,6.787,-18.093)
O4': (3.098,9.191,-17.091)
C5': (5.046,7.686,-17.095)
P: (5.549,6.152,-19.196)
C4': (3.886,8.265,-16.292)
C2': (1.633,8.119,-15.577)
O2': (1.646,8.827,-14.356)
N1: (0.955,8.655,-17.961)
O4: (-1.033,7.466,-21.252)
O2: (-0.867,9.955,-17.466)
C6: (1.531,7.759,-18.838)
C5: (0.928,7.320,-19.944)
O3': (3.349,6.665,-14.591)
Image (generated by PyMOL):