ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A235:A273

Extra

PDB:
ATOM 1 O3' U A 234 156.224 78.607 -27.273 1.00 35.83 O
ATOM 2 P C A 235 154.671 78.213 -27.131 1.00 37.47 P
ATOM 3 OP1 C A 235 153.955 79.453 -26.691 1.00 36.80 O
ATOM 4 OP2 C A 235 154.535 76.969 -26.331 1.00 37.80 O
ATOM 5 O5' C A 235 154.211 77.933 -28.627 1.00 35.61 O
ATOM 6 C5' C A 235 154.436 76.662 -29.217 1.00 34.11 C
ATOM 7 C4' C A 235 153.146 76.098 -29.752 1.00 34.20 C
ATOM 8 O4' C A 235 152.160 76.010 -28.689 1.00 33.79 O
ATOM 9 C3' C A 235 152.449 76.868 -30.862 1.00 32.71 C
ATOM 10 O3' C A 235 152.981 76.519 -32.120 1.00 32.86 O
ATOM 11 C2' C A 235 151.018 76.361 -30.765 1.00 33.47 C
ATOM 12 O2' C A 235 150.827 75.161 -31.480 1.00 32.97 O
ATOM 13 C1' C A 235 150.865 76.095 -29.262 1.00 34.68 C
ATOM 14 N1 C A 235 150.094 77.166 -28.611 1.00 35.34 N
ATOM 15 C2 C A 235 148.702 77.170 -28.773 1.00 35.45 C
ATOM 16 O2 C A 235 148.167 76.246 -29.416 1.00 32.22 O
ATOM 17 N3 C A 235 147.980 78.175 -28.225 1.00 36.28 N
ATOM 18 C4 C A 235 148.594 79.135 -27.529 1.00 34.21 C
ATOM 19 N4 C A 235 147.844 80.100 -27.003 1.00 34.22 N
ATOM 20 C5 C A 235 150.002 79.144 -27.338 1.00 33.89 C
ATOM 21 C6 C A 235 150.707 78.151 -27.885 1.00 33.79 C
ATOM 22 P A A 236 152.843 77.532 -33.365 1.00 34.30 P
ATOM 23 OP1 A A 236 153.673 76.937 -34.453 1.00 34.86 O
ATOM 24 OP2 A A 236 153.064 78.924 -32.916 1.00 34.24 O
ATOM 25 O5' A A 236 151.343 77.441 -33.817 1.00 35.13 O
TER

ATOM 1 O3' A B 272 138.741 75.263 -30.184 1.00 33.70 O
ATOM 2 P C B 273 139.256 74.346 -28.960 1.00 35.48 P
ATOM 3 OP1 C B 273 138.217 73.317 -28.688 1.00 37.18 O
ATOM 4 OP2 C B 273 139.703 75.236 -27.855 1.00 35.64 O
ATOM 5 O5' C B 273 140.513 73.578 -29.550 1.00 36.42 O
ATOM 6 C5' C B 273 140.358 72.552 -30.553 1.00 35.55 C
ATOM 7 C4' C B 273 141.713 72.094 -31.044 1.00 34.96 C
ATOM 8 O4' C B 273 142.349 73.168 -31.791 1.00 34.67 O
ATOM 9 C3' C B 273 142.712 71.748 -29.956 1.00 35.00 C
ATOM 10 O3' C B 273 142.554 70.442 -29.469 1.00 36.20 O
ATOM 11 C2' C B 273 144.040 71.947 -30.664 1.00 35.44 C
ATOM 12 O2' C B 273 144.368 70.842 -31.476 1.00 38.04 O
ATOM 13 C1' C B 273 143.744 73.173 -31.532 1.00 34.11 C
ATOM 14 N1 C B 273 144.082 74.405 -30.787 1.00 32.34 N
ATOM 15 C2 C B 273 145.426 74.743 -30.625 1.00 32.15 C
ATOM 16 O2 C B 273 146.292 74.074 -31.202 1.00 32.14 O
ATOM 17 N3 C B 273 145.753 75.791 -29.842 1.00 33.16 N
ATOM 18 C4 C B 273 144.798 76.502 -29.246 1.00 32.31 C
ATOM 19 N4 C B 273 145.179 77.494 -28.436 1.00 30.58 N
ATOM 20 C5 C B 273 143.417 76.220 -29.442 1.00 30.98 C
ATOM 21 C6 C B 273 143.107 75.177 -30.217 1.00 31.07 C
ATOM 22 P G B 274 142.843 70.132 -27.912 1.00 37.62 P
ATOM 23 OP1 G B 274 142.592 68.661 -27.764 1.00 36.53 O
ATOM 24 OP2 G B 274 142.132 71.105 -27.036 1.00 34.92 O
ATOM 25 O5' G B 274 144.394 70.397 -27.773 1.00 36.63 O
TER

Atoms:
C2: (148.702,77.170,-28.773)
OP1: (153.955,79.453,-26.691)
OP2: (154.535,76.969,-26.331)
C4: (148.594,79.135,-27.529)
O5': (154.211,77.933,-28.627)
C3': (152.449,76.868,-30.862)
C1': (150.865,76.095,-29.262)
O4': (152.160,76.010,-28.689)
C5': (154.436,76.662,-29.217)
P: (154.671,78.213,-27.131)
O2: (148.167,76.246,-29.416)
C4': (153.146,76.098,-29.752)
C2': (151.018,76.361,-30.765)
O2': (150.827,75.161,-31.480)
N1: (150.094,77.166,-28.611)
N3: (147.980,78.175,-28.225)
N4: (147.844,80.100,-27.003)
C6: (150.707,78.151,-27.885)
C5: (150.002,79.144,-27.338)
O3': (152.981,76.519,-32.120)
C2: (145.426,74.743,-30.625)
OP1: (138.217,73.317,-28.688)
OP2: (139.703,75.236,-27.855)
C4: (144.798,76.502,-29.246)
O5': (140.513,73.578,-29.550)
C3': (142.712,71.748,-29.956)
C1': (143.744,73.173,-31.532)
O4': (142.349,73.168,-31.791)
C5': (140.358,72.552,-30.553)
P: (139.256,74.346,-28.960)
O2: (146.292,74.074,-31.202)
C4': (141.713,72.094,-31.044)
C2': (144.040,71.947,-30.664)
O2': (144.368,70.842,-31.476)
N1: (144.082,74.405,-30.787)
N3: (145.753,75.791,-29.842)
N4: (145.179,77.494,-28.436)
C6: (143.107,75.177,-30.217)
C5: (143.417,76.220,-29.442)
O3': (142.554,70.442,-29.469)
Image (generated by PyMOL):
PyMOL image
show in jmol