Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01056:01044
Extra
PDB:
ATOM 1 O3' U A1055 15.759 92.386 110.983 1.00 39.07 O
ATOM 2 P A A1056 17.134 92.633 111.752 1.00 38.71 P
ATOM 3 OP1 A A1056 17.441 91.417 112.538 1.00 39.47 O
ATOM 4 OP2 A A1056 17.009 93.944 112.433 1.00 36.88 O
ATOM 5 O5' A A1056 18.208 92.742 110.585 1.00 39.16 O
ATOM 6 C5' A A1056 18.655 91.569 109.875 1.00 40.28 C
ATOM 7 C4' A A1056 19.921 91.880 109.104 1.00 40.14 C
ATOM 8 O4' A A1056 19.625 92.845 108.063 1.00 39.45 O
ATOM 9 C3' A A1056 21.030 92.533 109.916 1.00 38.69 C
ATOM 10 O3' A A1056 21.807 91.553 110.591 1.00 35.68 O
ATOM 11 C2' A A1056 21.842 93.252 108.850 1.00 39.96 C
ATOM 12 O2' A A1056 22.727 92.385 108.173 1.00 42.86 O
ATOM 13 C1' A A1056 20.747 93.688 107.872 1.00 40.92 C
ATOM 14 N9 A A1056 20.326 95.088 107.987 1.00 41.13 N
ATOM 15 C8 A A1056 19.197 95.612 108.573 1.00 39.84 C
ATOM 16 N7 A A1056 19.104 96.916 108.468 1.00 38.96 N
ATOM 17 C5 A A1056 20.251 97.278 107.777 1.00 39.69 C
ATOM 18 C6 A A1056 20.740 98.520 107.339 1.00 39.46 C
ATOM 19 N6 A A1056 20.109 99.675 107.534 1.00 38.79 N
ATOM 20 N1 A A1056 21.918 98.533 106.680 1.00 40.94 N
ATOM 21 C2 A A1056 22.551 97.371 106.472 1.00 40.32 C
ATOM 22 N3 A A1056 22.192 96.143 106.826 1.00 38.60 N
ATOM 23 C4 A A1056 21.018 96.165 107.482 1.00 40.28 C
ATOM 24 P A A1057 22.404 91.867 112.042 1.00 33.98 P
ATOM 25 OP1 A A1057 23.004 90.611 112.526 1.00 32.70 O
ATOM 26 OP2 A A1057 21.369 92.547 112.850 1.00 35.04 O
ATOM 27 O5' A A1057 23.568 92.912 111.763 1.00 35.59 O
TER
ATOM 1 O3' C B1043 30.184 91.655 108.528 1.00 32.48 O
ATOM 2 P C B1044 29.605 91.005 107.179 1.00 34.34 P
ATOM 3 OP1 C B1044 29.164 89.620 107.489 1.00 33.29 O
ATOM 4 OP2 C B1044 30.585 91.230 106.099 1.00 33.60 O
ATOM 5 O5' C B1044 28.307 91.869 106.863 1.00 33.33 O
ATOM 6 C5' C B1044 27.183 91.849 107.753 1.00 31.50 C
ATOM 7 C4' C B1044 26.117 92.804 107.276 1.00 32.48 C
ATOM 8 O4' C B1044 26.570 94.174 107.416 1.00 33.99 O
ATOM 9 C3' C B1044 25.729 92.699 105.813 1.00 31.82 C
ATOM 10 O3' C B1044 24.815 91.647 105.583 1.00 32.58 O
ATOM 11 C2' C B1044 25.080 94.046 105.569 1.00 33.04 C
ATOM 12 O2' C B1044 23.772 94.087 106.093 1.00 31.51 O
ATOM 13 C1' C B1044 25.994 94.964 106.385 1.00 35.90 C
ATOM 14 N1 C B1044 27.073 95.544 105.559 1.00 39.91 N
ATOM 15 C2 C B1044 26.770 96.630 104.734 1.00 41.26 C
ATOM 16 O2 C B1044 25.622 97.091 104.753 1.00 42.45 O
ATOM 17 N3 C B1044 27.736 97.152 103.941 1.00 41.89 N
ATOM 18 C4 C B1044 28.965 96.636 103.958 1.00 41.24 C
ATOM 19 N4 C B1044 29.879 97.176 103.152 1.00 39.77 N
ATOM 20 C5 C B1044 29.311 95.540 104.801 1.00 41.21 C
ATOM 21 C6 C B1044 28.344 95.030 105.579 1.00 41.56 C
ATOM 22 P A B1045 24.894 90.808 104.218 1.00 33.57 P
ATOM 23 OP1 A B1045 23.740 89.871 104.203 1.00 33.86 O
ATOM 24 OP2 A B1045 26.266 90.267 104.082 1.00 34.27 O
ATOM 25 O5' A B1045 24.693 91.916 103.094 1.00 32.12 O
TER
ATOM 2 P A A1056 17.134 92.633 111.752 1.00 38.71 P
ATOM 3 OP1 A A1056 17.441 91.417 112.538 1.00 39.47 O
ATOM 4 OP2 A A1056 17.009 93.944 112.433 1.00 36.88 O
ATOM 5 O5' A A1056 18.208 92.742 110.585 1.00 39.16 O
ATOM 6 C5' A A1056 18.655 91.569 109.875 1.00 40.28 C
ATOM 7 C4' A A1056 19.921 91.880 109.104 1.00 40.14 C
ATOM 8 O4' A A1056 19.625 92.845 108.063 1.00 39.45 O
ATOM 9 C3' A A1056 21.030 92.533 109.916 1.00 38.69 C
ATOM 10 O3' A A1056 21.807 91.553 110.591 1.00 35.68 O
ATOM 11 C2' A A1056 21.842 93.252 108.850 1.00 39.96 C
ATOM 12 O2' A A1056 22.727 92.385 108.173 1.00 42.86 O
ATOM 13 C1' A A1056 20.747 93.688 107.872 1.00 40.92 C
ATOM 14 N9 A A1056 20.326 95.088 107.987 1.00 41.13 N
ATOM 15 C8 A A1056 19.197 95.612 108.573 1.00 39.84 C
ATOM 16 N7 A A1056 19.104 96.916 108.468 1.00 38.96 N
ATOM 17 C5 A A1056 20.251 97.278 107.777 1.00 39.69 C
ATOM 18 C6 A A1056 20.740 98.520 107.339 1.00 39.46 C
ATOM 19 N6 A A1056 20.109 99.675 107.534 1.00 38.79 N
ATOM 20 N1 A A1056 21.918 98.533 106.680 1.00 40.94 N
ATOM 21 C2 A A1056 22.551 97.371 106.472 1.00 40.32 C
ATOM 22 N3 A A1056 22.192 96.143 106.826 1.00 38.60 N
ATOM 23 C4 A A1056 21.018 96.165 107.482 1.00 40.28 C
ATOM 24 P A A1057 22.404 91.867 112.042 1.00 33.98 P
ATOM 25 OP1 A A1057 23.004 90.611 112.526 1.00 32.70 O
ATOM 26 OP2 A A1057 21.369 92.547 112.850 1.00 35.04 O
ATOM 27 O5' A A1057 23.568 92.912 111.763 1.00 35.59 O
TER
ATOM 1 O3' C B1043 30.184 91.655 108.528 1.00 32.48 O
ATOM 2 P C B1044 29.605 91.005 107.179 1.00 34.34 P
ATOM 3 OP1 C B1044 29.164 89.620 107.489 1.00 33.29 O
ATOM 4 OP2 C B1044 30.585 91.230 106.099 1.00 33.60 O
ATOM 5 O5' C B1044 28.307 91.869 106.863 1.00 33.33 O
ATOM 6 C5' C B1044 27.183 91.849 107.753 1.00 31.50 C
ATOM 7 C4' C B1044 26.117 92.804 107.276 1.00 32.48 C
ATOM 8 O4' C B1044 26.570 94.174 107.416 1.00 33.99 O
ATOM 9 C3' C B1044 25.729 92.699 105.813 1.00 31.82 C
ATOM 10 O3' C B1044 24.815 91.647 105.583 1.00 32.58 O
ATOM 11 C2' C B1044 25.080 94.046 105.569 1.00 33.04 C
ATOM 12 O2' C B1044 23.772 94.087 106.093 1.00 31.51 O
ATOM 13 C1' C B1044 25.994 94.964 106.385 1.00 35.90 C
ATOM 14 N1 C B1044 27.073 95.544 105.559 1.00 39.91 N
ATOM 15 C2 C B1044 26.770 96.630 104.734 1.00 41.26 C
ATOM 16 O2 C B1044 25.622 97.091 104.753 1.00 42.45 O
ATOM 17 N3 C B1044 27.736 97.152 103.941 1.00 41.89 N
ATOM 18 C4 C B1044 28.965 96.636 103.958 1.00 41.24 C
ATOM 19 N4 C B1044 29.879 97.176 103.152 1.00 39.77 N
ATOM 20 C5 C B1044 29.311 95.540 104.801 1.00 41.21 C
ATOM 21 C6 C B1044 28.344 95.030 105.579 1.00 41.56 C
ATOM 22 P A B1045 24.894 90.808 104.218 1.00 33.57 P
ATOM 23 OP1 A B1045 23.740 89.871 104.203 1.00 33.86 O
ATOM 24 OP2 A B1045 26.266 90.267 104.082 1.00 34.27 O
ATOM 25 O5' A B1045 24.693 91.916 103.094 1.00 32.12 O
TER
Atoms:
OP1: (17.441,91.417,112.538)
OP2: (17.009,93.944,112.433)
C3': (21.030,92.533,109.916)
C1': (20.747,93.688,107.872)
C5': (18.655,91.569,109.875)
O4': (19.625,92.845,108.063)
C8: (19.197,95.612,108.573)
O2': (22.727,92.385,108.173)
C6: (20.740,98.520,107.339)
C5: (20.251,97.278,107.777)
C4: (21.018,96.165,107.482)
P: (17.134,92.633,111.752)
C4': (19.921,91.880,109.104)
C2': (21.842,93.252,108.850)
C2: (22.551,97.371,106.472)
N1: (21.918,98.533,106.680)
N3: (22.192,96.143,106.826)
N6: (20.109,99.675,107.534)
N7: (19.104,96.916,108.468)
N9: (20.326,95.088,107.987)
O5': (18.208,92.742,110.585)
O3': (21.807,91.553,110.591)
OP2: (17.009,93.944,112.433)
C3': (21.030,92.533,109.916)
C1': (20.747,93.688,107.872)
C5': (18.655,91.569,109.875)
O4': (19.625,92.845,108.063)
C8: (19.197,95.612,108.573)
O2': (22.727,92.385,108.173)
C6: (20.740,98.520,107.339)
C5: (20.251,97.278,107.777)
C4: (21.018,96.165,107.482)
P: (17.134,92.633,111.752)
C4': (19.921,91.880,109.104)
C2': (21.842,93.252,108.850)
C2: (22.551,97.371,106.472)
N1: (21.918,98.533,106.680)
N3: (22.192,96.143,106.826)
N6: (20.109,99.675,107.534)
N7: (19.104,96.916,108.468)
N9: (20.326,95.088,107.987)
O5': (18.208,92.742,110.585)
O3': (21.807,91.553,110.591)
C2: (26.770,96.630,104.734)
OP1: (29.164,89.620,107.489)
OP2: (30.585,91.230,106.099)
C4: (28.965,96.636,103.958)
O5': (28.307,91.869,106.863)
C3': (25.729,92.699,105.813)
C1': (25.994,94.964,106.385)
O4': (26.570,94.174,107.416)
C5': (27.183,91.849,107.753)
P: (29.605,91.005,107.179)
O2: (25.622,97.091,104.753)
C4': (26.117,92.804,107.276)
C2': (25.080,94.046,105.569)
O2': (23.772,94.087,106.093)
N1: (27.073,95.544,105.559)
N3: (27.736,97.152,103.941)
N4: (29.879,97.176,103.152)
C6: (28.344,95.030,105.579)
C5: (29.311,95.540,104.801)
O3': (24.815,91.647,105.583)
OP1: (29.164,89.620,107.489)
OP2: (30.585,91.230,106.099)
C4: (28.965,96.636,103.958)
O5': (28.307,91.869,106.863)
C3': (25.729,92.699,105.813)
C1': (25.994,94.964,106.385)
O4': (26.570,94.174,107.416)
C5': (27.183,91.849,107.753)
P: (29.605,91.005,107.179)
O2: (25.622,97.091,104.753)
C4': (26.117,92.804,107.276)
C2': (25.080,94.046,105.569)
O2': (23.772,94.087,106.093)
N1: (27.073,95.544,105.559)
N3: (27.736,97.152,103.941)
N4: (29.879,97.176,103.152)
C6: (28.344,95.030,105.579)
C5: (29.311,95.540,104.801)
O3': (24.815,91.647,105.583)
Image (generated by PyMOL):