Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A252:A120
Extra
PDB:
ATOM 1 O3' U A 251 113.912 56.826 -18.475 1.00 62.38 O
ATOM 2 P A A 252 112.458 56.489 -17.876 1.00 46.24 P
ATOM 3 OP1 A A 252 112.608 55.966 -16.490 1.00 52.18 O
ATOM 4 OP2 A A 252 111.760 55.688 -18.910 1.00 52.18 O
ATOM 5 O5' A A 252 111.714 57.889 -17.786 1.00 46.24 O
ATOM 6 C5' A A 252 110.302 57.962 -17.536 1.00 46.24 C
ATOM 7 C4' A A 252 109.844 59.397 -17.621 1.00 46.24 C
ATOM 8 O4' A A 252 110.393 60.145 -16.507 1.00 46.24 O
ATOM 9 C3' A A 252 110.318 60.113 -18.872 1.00 46.24 C
ATOM 10 O3' A A 252 109.381 59.941 -19.922 1.00 46.24 O
ATOM 11 C2' A A 252 110.425 61.564 -18.426 1.00 46.24 C
ATOM 12 O2' A A 252 109.194 62.240 -18.535 1.00 46.24 O
ATOM 13 C1' A A 252 110.812 61.419 -16.947 1.00 46.24 C
ATOM 14 N9 A A 252 112.243 61.533 -16.659 1.00 52.18 N
ATOM 15 C8 A A 252 113.147 60.513 -16.508 1.00 52.18 C
ATOM 16 N7 A A 252 114.354 60.916 -16.207 1.00 52.18 N
ATOM 17 C5 A A 252 114.241 62.294 -16.169 1.00 52.18 C
ATOM 18 C6 A A 252 115.166 63.298 -15.900 1.00 52.18 C
ATOM 19 N6 A A 252 116.441 63.067 -15.605 1.00 52.18 N
ATOM 20 N1 A A 252 114.739 64.571 -15.944 1.00 52.18 N
ATOM 21 C2 A A 252 113.458 64.805 -16.247 1.00 52.18 C
ATOM 22 N3 A A 252 112.490 63.944 -16.521 1.00 52.18 N
ATOM 23 C4 A A 252 112.952 62.688 -16.461 1.00 52.18 C
ATOM 24 P A A 253 109.897 59.902 -21.435 1.00 39.12 P
ATOM 25 OP1 A A 253 108.776 59.719 -22.404 1.00 47.07 O
ATOM 26 OP2 A A 253 111.040 58.966 -21.464 1.00 47.07 O
ATOM 27 O5' A A 253 110.447 61.375 -21.630 1.00 39.12 O
TER
ATOM 1 O3' A B 119 108.049 67.331 -23.545 1.00 48.90 O
ATOM 2 P C B 120 106.897 66.916 -22.492 1.00 50.54 P
ATOM 3 OP1 C B 120 106.929 65.430 -22.462 1.00 36.19 O
ATOM 4 OP2 C B 120 105.609 67.610 -22.780 1.00 36.19 O
ATOM 5 O5' C B 120 107.458 67.461 -21.102 1.00 50.54 O
ATOM 6 C5' C B 120 107.045 66.890 -19.848 1.00 50.54 C
ATOM 7 C4' C B 120 108.213 66.205 -19.184 1.00 50.54 C
ATOM 8 O4' C B 120 109.369 67.081 -19.170 1.00 50.54 O
ATOM 9 C3' C B 120 108.009 65.833 -17.729 1.00 50.54 C
ATOM 10 O3' C B 120 107.308 64.612 -17.602 1.00 50.54 O
ATOM 11 C2' C B 120 109.436 65.745 -17.205 1.00 50.54 C
ATOM 12 O2' C B 120 110.067 64.526 -17.541 1.00 50.54 O
ATOM 13 C1' C B 120 110.120 66.864 -17.987 1.00 50.54 C
ATOM 14 N1 C B 120 110.216 68.131 -17.234 1.00 36.19 N
ATOM 15 C2 C B 120 111.080 68.202 -16.120 1.00 36.19 C
ATOM 16 O2 C B 120 111.748 67.215 -15.809 1.00 36.19 O
ATOM 17 N3 C B 120 111.163 69.347 -15.420 1.00 36.19 N
ATOM 18 C4 C B 120 110.438 70.404 -15.787 1.00 36.19 C
ATOM 19 N4 C B 120 110.546 71.514 -15.057 1.00 36.19 N
ATOM 20 C5 C B 120 109.568 70.371 -16.916 1.00 36.19 C
ATOM 21 C6 C B 120 109.485 69.225 -17.602 1.00 36.19 C
ATOM 22 P C B 121 106.202 64.457 -16.450 1.00 56.85 P
ATOM 23 OP1 C B 121 105.212 63.494 -16.993 1.00 39.82 O
ATOM 24 OP2 C B 121 105.755 65.801 -16.004 1.00 39.82 O
ATOM 25 O5' C B 121 106.995 63.824 -15.223 1.00 56.85 O
TER
ATOM 2 P A A 252 112.458 56.489 -17.876 1.00 46.24 P
ATOM 3 OP1 A A 252 112.608 55.966 -16.490 1.00 52.18 O
ATOM 4 OP2 A A 252 111.760 55.688 -18.910 1.00 52.18 O
ATOM 5 O5' A A 252 111.714 57.889 -17.786 1.00 46.24 O
ATOM 6 C5' A A 252 110.302 57.962 -17.536 1.00 46.24 C
ATOM 7 C4' A A 252 109.844 59.397 -17.621 1.00 46.24 C
ATOM 8 O4' A A 252 110.393 60.145 -16.507 1.00 46.24 O
ATOM 9 C3' A A 252 110.318 60.113 -18.872 1.00 46.24 C
ATOM 10 O3' A A 252 109.381 59.941 -19.922 1.00 46.24 O
ATOM 11 C2' A A 252 110.425 61.564 -18.426 1.00 46.24 C
ATOM 12 O2' A A 252 109.194 62.240 -18.535 1.00 46.24 O
ATOM 13 C1' A A 252 110.812 61.419 -16.947 1.00 46.24 C
ATOM 14 N9 A A 252 112.243 61.533 -16.659 1.00 52.18 N
ATOM 15 C8 A A 252 113.147 60.513 -16.508 1.00 52.18 C
ATOM 16 N7 A A 252 114.354 60.916 -16.207 1.00 52.18 N
ATOM 17 C5 A A 252 114.241 62.294 -16.169 1.00 52.18 C
ATOM 18 C6 A A 252 115.166 63.298 -15.900 1.00 52.18 C
ATOM 19 N6 A A 252 116.441 63.067 -15.605 1.00 52.18 N
ATOM 20 N1 A A 252 114.739 64.571 -15.944 1.00 52.18 N
ATOM 21 C2 A A 252 113.458 64.805 -16.247 1.00 52.18 C
ATOM 22 N3 A A 252 112.490 63.944 -16.521 1.00 52.18 N
ATOM 23 C4 A A 252 112.952 62.688 -16.461 1.00 52.18 C
ATOM 24 P A A 253 109.897 59.902 -21.435 1.00 39.12 P
ATOM 25 OP1 A A 253 108.776 59.719 -22.404 1.00 47.07 O
ATOM 26 OP2 A A 253 111.040 58.966 -21.464 1.00 47.07 O
ATOM 27 O5' A A 253 110.447 61.375 -21.630 1.00 39.12 O
TER
ATOM 1 O3' A B 119 108.049 67.331 -23.545 1.00 48.90 O
ATOM 2 P C B 120 106.897 66.916 -22.492 1.00 50.54 P
ATOM 3 OP1 C B 120 106.929 65.430 -22.462 1.00 36.19 O
ATOM 4 OP2 C B 120 105.609 67.610 -22.780 1.00 36.19 O
ATOM 5 O5' C B 120 107.458 67.461 -21.102 1.00 50.54 O
ATOM 6 C5' C B 120 107.045 66.890 -19.848 1.00 50.54 C
ATOM 7 C4' C B 120 108.213 66.205 -19.184 1.00 50.54 C
ATOM 8 O4' C B 120 109.369 67.081 -19.170 1.00 50.54 O
ATOM 9 C3' C B 120 108.009 65.833 -17.729 1.00 50.54 C
ATOM 10 O3' C B 120 107.308 64.612 -17.602 1.00 50.54 O
ATOM 11 C2' C B 120 109.436 65.745 -17.205 1.00 50.54 C
ATOM 12 O2' C B 120 110.067 64.526 -17.541 1.00 50.54 O
ATOM 13 C1' C B 120 110.120 66.864 -17.987 1.00 50.54 C
ATOM 14 N1 C B 120 110.216 68.131 -17.234 1.00 36.19 N
ATOM 15 C2 C B 120 111.080 68.202 -16.120 1.00 36.19 C
ATOM 16 O2 C B 120 111.748 67.215 -15.809 1.00 36.19 O
ATOM 17 N3 C B 120 111.163 69.347 -15.420 1.00 36.19 N
ATOM 18 C4 C B 120 110.438 70.404 -15.787 1.00 36.19 C
ATOM 19 N4 C B 120 110.546 71.514 -15.057 1.00 36.19 N
ATOM 20 C5 C B 120 109.568 70.371 -16.916 1.00 36.19 C
ATOM 21 C6 C B 120 109.485 69.225 -17.602 1.00 36.19 C
ATOM 22 P C B 121 106.202 64.457 -16.450 1.00 56.85 P
ATOM 23 OP1 C B 121 105.212 63.494 -16.993 1.00 39.82 O
ATOM 24 OP2 C B 121 105.755 65.801 -16.004 1.00 39.82 O
ATOM 25 O5' C B 121 106.995 63.824 -15.223 1.00 56.85 O
TER
Atoms:
OP1: (112.608,55.966,-16.490)
OP2: (111.760,55.688,-18.910)
C3': (110.318,60.113,-18.872)
C1': (110.812,61.419,-16.947)
C5': (110.302,57.962,-17.536)
O4': (110.393,60.145,-16.507)
C8: (113.147,60.513,-16.508)
O2': (109.194,62.240,-18.535)
C6: (115.166,63.298,-15.900)
C5: (114.241,62.294,-16.169)
C4: (112.952,62.688,-16.461)
P: (112.458,56.489,-17.876)
C4': (109.844,59.397,-17.621)
C2': (110.425,61.564,-18.426)
C2: (113.458,64.805,-16.247)
N1: (114.739,64.571,-15.944)
N3: (112.490,63.944,-16.521)
N6: (116.441,63.067,-15.605)
N7: (114.354,60.916,-16.207)
N9: (112.243,61.533,-16.659)
O5': (111.714,57.889,-17.786)
O3': (109.381,59.941,-19.922)
OP2: (111.760,55.688,-18.910)
C3': (110.318,60.113,-18.872)
C1': (110.812,61.419,-16.947)
C5': (110.302,57.962,-17.536)
O4': (110.393,60.145,-16.507)
C8: (113.147,60.513,-16.508)
O2': (109.194,62.240,-18.535)
C6: (115.166,63.298,-15.900)
C5: (114.241,62.294,-16.169)
C4: (112.952,62.688,-16.461)
P: (112.458,56.489,-17.876)
C4': (109.844,59.397,-17.621)
C2': (110.425,61.564,-18.426)
C2: (113.458,64.805,-16.247)
N1: (114.739,64.571,-15.944)
N3: (112.490,63.944,-16.521)
N6: (116.441,63.067,-15.605)
N7: (114.354,60.916,-16.207)
N9: (112.243,61.533,-16.659)
O5': (111.714,57.889,-17.786)
O3': (109.381,59.941,-19.922)
C2: (111.080,68.202,-16.120)
OP1: (106.929,65.430,-22.462)
OP2: (105.609,67.610,-22.780)
C4: (110.438,70.404,-15.787)
O5': (107.458,67.461,-21.102)
C3': (108.009,65.833,-17.729)
C1': (110.120,66.864,-17.987)
O4': (109.369,67.081,-19.170)
C5': (107.045,66.890,-19.848)
P: (106.897,66.916,-22.492)
O2: (111.748,67.215,-15.809)
C4': (108.213,66.205,-19.184)
C2': (109.436,65.745,-17.205)
O2': (110.067,64.526,-17.541)
N1: (110.216,68.131,-17.234)
N3: (111.163,69.347,-15.420)
N4: (110.546,71.514,-15.057)
C6: (109.485,69.225,-17.602)
C5: (109.568,70.371,-16.916)
O3': (107.308,64.612,-17.602)
OP1: (106.929,65.430,-22.462)
OP2: (105.609,67.610,-22.780)
C4: (110.438,70.404,-15.787)
O5': (107.458,67.461,-21.102)
C3': (108.009,65.833,-17.729)
C1': (110.120,66.864,-17.987)
O4': (109.369,67.081,-19.170)
C5': (107.045,66.890,-19.848)
P: (106.897,66.916,-22.492)
O2: (111.748,67.215,-15.809)
C4': (108.213,66.205,-19.184)
C2': (109.436,65.745,-17.205)
O2': (110.067,64.526,-17.541)
N1: (110.216,68.131,-17.234)
N3: (111.163,69.347,-15.420)
N4: (110.546,71.514,-15.057)
C6: (109.485,69.225,-17.602)
C5: (109.568,70.371,-16.916)
O3': (107.308,64.612,-17.602)
Image (generated by PyMOL):