Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0279:0349
Extra
PDB:
ATOM 1 O3' C A 278 61.498 128.456 -1.877 1.00 66.96 O
ATOM 2 P C A 279 60.509 128.965 -0.724 1.00 64.72 P
ATOM 3 OP1 C A 279 60.383 130.434 -0.861 1.00 64.52 O
ATOM 4 OP2 C A 279 60.982 128.385 0.558 1.00 66.14 O
ATOM 5 O5' C A 279 59.111 128.310 -1.112 1.00 65.21 O
ATOM 6 C5' C A 279 58.540 128.535 -2.412 1.00 65.81 C
ATOM 7 C4' C A 279 57.350 127.631 -2.641 1.00 66.48 C
ATOM 8 O4' C A 279 57.755 126.236 -2.623 1.00 66.98 O
ATOM 9 C3' C A 279 56.239 127.699 -1.610 1.00 65.99 C
ATOM 10 O3' C A 279 55.395 128.816 -1.847 1.00 67.06 O
ATOM 11 C2' C A 279 55.509 126.386 -1.853 1.00 65.97 C
ATOM 12 O2' C A 279 54.676 126.443 -2.992 1.00 65.85 O
ATOM 13 C1' C A 279 56.677 125.441 -2.150 1.00 66.17 C
ATOM 14 N1 C A 279 57.127 124.646 -0.987 1.00 65.38 N
ATOM 15 C2 C A 279 56.337 123.559 -0.560 1.00 65.01 C
ATOM 16 O2 C A 279 55.270 123.313 -1.148 1.00 64.87 O
ATOM 17 N3 C A 279 56.755 122.811 0.485 1.00 64.25 N
ATOM 18 C4 C A 279 57.897 123.109 1.104 1.00 64.46 C
ATOM 19 N4 C A 279 58.274 122.332 2.122 1.00 64.83 N
ATOM 20 C5 C A 279 58.708 124.215 0.706 1.00 64.33 C
ATOM 21 C6 C A 279 58.291 124.948 -0.333 1.00 64.16 C
ATOM 22 P G A 280 54.721 129.578 -0.609 1.00 68.01 P
ATOM 23 OP1 G A 280 53.687 130.504 -1.148 1.00 67.86 O
ATOM 24 OP2 G A 280 55.811 130.116 0.247 1.00 67.82 O
ATOM 25 O5' G A 280 53.972 128.411 0.174 1.00 67.63 O
TER
ATOM 1 O3' A B 348 53.967 113.851 4.726 1.00 73.10 O
ATOM 2 P C B 349 54.618 113.558 3.295 1.00 74.90 P
ATOM 3 OP1 C B 349 54.598 112.090 3.106 1.00 76.17 O
ATOM 4 OP2 C B 349 55.907 114.289 3.202 1.00 76.50 O
ATOM 5 O5' C B 349 53.588 114.224 2.280 1.00 74.21 O
ATOM 6 C5' C B 349 52.237 113.746 2.192 1.00 74.29 C
ATOM 7 C4' C B 349 51.461 114.564 1.196 1.00 75.43 C
ATOM 8 O4' C B 349 51.262 115.904 1.714 1.00 76.12 O
ATOM 9 C3' C B 349 52.146 114.791 -0.138 1.00 76.09 C
ATOM 10 O3' C B 349 52.027 113.674 -1.008 1.00 76.24 O
ATOM 11 C2' C B 349 51.430 116.032 -0.651 1.00 76.31 C
ATOM 12 O2' C B 349 50.149 115.743 -1.173 1.00 75.38 O
ATOM 13 C1' C B 349 51.281 116.836 0.642 1.00 76.67 C
ATOM 14 N1 C B 349 52.392 117.783 0.866 1.00 77.53 N
ATOM 15 C2 C B 349 52.260 119.107 0.411 1.00 77.79 C
ATOM 16 O2 C B 349 51.212 119.448 -0.166 1.00 76.83 O
ATOM 17 N3 C B 349 53.280 119.978 0.613 1.00 78.09 N
ATOM 18 C4 C B 349 54.392 119.576 1.239 1.00 77.93 C
ATOM 19 N4 C B 349 55.372 120.467 1.417 1.00 76.39 N
ATOM 20 C5 C B 349 54.549 118.239 1.711 1.00 78.10 C
ATOM 21 C6 C B 349 53.537 117.386 1.506 1.00 78.05 C
ATOM 22 P G B 350 53.237 113.317 -2.002 1.00 76.15 P
ATOM 23 OP1 G B 350 52.812 112.152 -2.808 1.00 76.75 O
ATOM 24 OP2 G B 350 54.491 113.241 -1.211 1.00 75.10 O
ATOM 25 O5' G B 350 53.310 114.584 -2.967 1.00 77.51 O
TER
ATOM 2 P C A 279 60.509 128.965 -0.724 1.00 64.72 P
ATOM 3 OP1 C A 279 60.383 130.434 -0.861 1.00 64.52 O
ATOM 4 OP2 C A 279 60.982 128.385 0.558 1.00 66.14 O
ATOM 5 O5' C A 279 59.111 128.310 -1.112 1.00 65.21 O
ATOM 6 C5' C A 279 58.540 128.535 -2.412 1.00 65.81 C
ATOM 7 C4' C A 279 57.350 127.631 -2.641 1.00 66.48 C
ATOM 8 O4' C A 279 57.755 126.236 -2.623 1.00 66.98 O
ATOM 9 C3' C A 279 56.239 127.699 -1.610 1.00 65.99 C
ATOM 10 O3' C A 279 55.395 128.816 -1.847 1.00 67.06 O
ATOM 11 C2' C A 279 55.509 126.386 -1.853 1.00 65.97 C
ATOM 12 O2' C A 279 54.676 126.443 -2.992 1.00 65.85 O
ATOM 13 C1' C A 279 56.677 125.441 -2.150 1.00 66.17 C
ATOM 14 N1 C A 279 57.127 124.646 -0.987 1.00 65.38 N
ATOM 15 C2 C A 279 56.337 123.559 -0.560 1.00 65.01 C
ATOM 16 O2 C A 279 55.270 123.313 -1.148 1.00 64.87 O
ATOM 17 N3 C A 279 56.755 122.811 0.485 1.00 64.25 N
ATOM 18 C4 C A 279 57.897 123.109 1.104 1.00 64.46 C
ATOM 19 N4 C A 279 58.274 122.332 2.122 1.00 64.83 N
ATOM 20 C5 C A 279 58.708 124.215 0.706 1.00 64.33 C
ATOM 21 C6 C A 279 58.291 124.948 -0.333 1.00 64.16 C
ATOM 22 P G A 280 54.721 129.578 -0.609 1.00 68.01 P
ATOM 23 OP1 G A 280 53.687 130.504 -1.148 1.00 67.86 O
ATOM 24 OP2 G A 280 55.811 130.116 0.247 1.00 67.82 O
ATOM 25 O5' G A 280 53.972 128.411 0.174 1.00 67.63 O
TER
ATOM 1 O3' A B 348 53.967 113.851 4.726 1.00 73.10 O
ATOM 2 P C B 349 54.618 113.558 3.295 1.00 74.90 P
ATOM 3 OP1 C B 349 54.598 112.090 3.106 1.00 76.17 O
ATOM 4 OP2 C B 349 55.907 114.289 3.202 1.00 76.50 O
ATOM 5 O5' C B 349 53.588 114.224 2.280 1.00 74.21 O
ATOM 6 C5' C B 349 52.237 113.746 2.192 1.00 74.29 C
ATOM 7 C4' C B 349 51.461 114.564 1.196 1.00 75.43 C
ATOM 8 O4' C B 349 51.262 115.904 1.714 1.00 76.12 O
ATOM 9 C3' C B 349 52.146 114.791 -0.138 1.00 76.09 C
ATOM 10 O3' C B 349 52.027 113.674 -1.008 1.00 76.24 O
ATOM 11 C2' C B 349 51.430 116.032 -0.651 1.00 76.31 C
ATOM 12 O2' C B 349 50.149 115.743 -1.173 1.00 75.38 O
ATOM 13 C1' C B 349 51.281 116.836 0.642 1.00 76.67 C
ATOM 14 N1 C B 349 52.392 117.783 0.866 1.00 77.53 N
ATOM 15 C2 C B 349 52.260 119.107 0.411 1.00 77.79 C
ATOM 16 O2 C B 349 51.212 119.448 -0.166 1.00 76.83 O
ATOM 17 N3 C B 349 53.280 119.978 0.613 1.00 78.09 N
ATOM 18 C4 C B 349 54.392 119.576 1.239 1.00 77.93 C
ATOM 19 N4 C B 349 55.372 120.467 1.417 1.00 76.39 N
ATOM 20 C5 C B 349 54.549 118.239 1.711 1.00 78.10 C
ATOM 21 C6 C B 349 53.537 117.386 1.506 1.00 78.05 C
ATOM 22 P G B 350 53.237 113.317 -2.002 1.00 76.15 P
ATOM 23 OP1 G B 350 52.812 112.152 -2.808 1.00 76.75 O
ATOM 24 OP2 G B 350 54.491 113.241 -1.211 1.00 75.10 O
ATOM 25 O5' G B 350 53.310 114.584 -2.967 1.00 77.51 O
TER
Atoms:
C2: (56.337,123.559,-0.560)
OP1: (60.383,130.434,-0.861)
OP2: (60.982,128.385,0.558)
C4: (57.897,123.109,1.104)
O5': (59.111,128.310,-1.112)
C3': (56.239,127.699,-1.610)
C1': (56.677,125.441,-2.150)
O4': (57.755,126.236,-2.623)
C5': (58.540,128.535,-2.412)
P: (60.509,128.965,-0.724)
O2: (55.270,123.313,-1.148)
C4': (57.350,127.631,-2.641)
C2': (55.509,126.386,-1.853)
O2': (54.676,126.443,-2.992)
N1: (57.127,124.646,-0.987)
N3: (56.755,122.811,0.485)
N4: (58.274,122.332,2.122)
C6: (58.291,124.948,-0.333)
C5: (58.708,124.215,0.706)
O3': (55.395,128.816,-1.847)
OP1: (60.383,130.434,-0.861)
OP2: (60.982,128.385,0.558)
C4: (57.897,123.109,1.104)
O5': (59.111,128.310,-1.112)
C3': (56.239,127.699,-1.610)
C1': (56.677,125.441,-2.150)
O4': (57.755,126.236,-2.623)
C5': (58.540,128.535,-2.412)
P: (60.509,128.965,-0.724)
O2: (55.270,123.313,-1.148)
C4': (57.350,127.631,-2.641)
C2': (55.509,126.386,-1.853)
O2': (54.676,126.443,-2.992)
N1: (57.127,124.646,-0.987)
N3: (56.755,122.811,0.485)
N4: (58.274,122.332,2.122)
C6: (58.291,124.948,-0.333)
C5: (58.708,124.215,0.706)
O3': (55.395,128.816,-1.847)
C2: (52.260,119.107,0.411)
OP1: (54.598,112.090,3.106)
OP2: (55.907,114.289,3.202)
C4: (54.392,119.576,1.239)
O5': (53.588,114.224,2.280)
C3': (52.146,114.791,-0.138)
C1': (51.281,116.836,0.642)
O4': (51.262,115.904,1.714)
C5': (52.237,113.746,2.192)
P: (54.618,113.558,3.295)
O2: (51.212,119.448,-0.166)
C4': (51.461,114.564,1.196)
C2': (51.430,116.032,-0.651)
O2': (50.149,115.743,-1.173)
N1: (52.392,117.783,0.866)
N3: (53.280,119.978,0.613)
N4: (55.372,120.467,1.417)
C6: (53.537,117.386,1.506)
C5: (54.549,118.239,1.711)
O3': (52.027,113.674,-1.008)
OP1: (54.598,112.090,3.106)
OP2: (55.907,114.289,3.202)
C4: (54.392,119.576,1.239)
O5': (53.588,114.224,2.280)
C3': (52.146,114.791,-0.138)
C1': (51.281,116.836,0.642)
O4': (51.262,115.904,1.714)
C5': (52.237,113.746,2.192)
P: (54.618,113.558,3.295)
O2: (51.212,119.448,-0.166)
C4': (51.461,114.564,1.196)
C2': (51.430,116.032,-0.651)
O2': (50.149,115.743,-1.173)
N1: (52.392,117.783,0.866)
N3: (53.280,119.978,0.613)
N4: (55.372,120.467,1.417)
C6: (53.537,117.386,1.506)
C5: (54.549,118.239,1.711)
O3': (52.027,113.674,-1.008)
Image (generated by PyMOL):