Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2985:2988
Extra
PDB:
ATOM 1 O3' G A 984 -33.266 -24.650 78.090 1.00 88.43 O
ATOM 2 P A A 985 -32.895 -25.168 79.562 1.00 82.28 P
ATOM 3 OP1 A A 985 -31.554 -24.652 79.884 1.00 81.88 O
ATOM 4 OP2 A A 985 -33.105 -26.614 79.573 1.00 83.65 O
ATOM 5 O5' A A 985 -33.988 -24.436 80.478 1.00 81.64 O
ATOM 6 C5' A A 985 -34.109 -23.001 80.468 1.00 80.32 C
ATOM 7 C4' A A 985 -34.887 -22.461 81.651 1.00 79.94 C
ATOM 8 O4' A A 985 -36.229 -22.067 81.239 1.00 79.56 O
ATOM 9 C3' A A 985 -35.086 -23.428 82.815 1.00 80.96 C
ATOM 10 O3' A A 985 -35.087 -22.681 84.027 1.00 80.45 O
ATOM 11 C2' A A 985 -36.492 -23.930 82.562 1.00 81.40 C
ATOM 12 O2' A A 985 -37.117 -24.488 83.687 1.00 82.08 O
ATOM 13 C1' A A 985 -37.139 -22.631 82.148 1.00 80.18 C
ATOM 14 N9 A A 985 -38.454 -22.760 81.534 1.00 80.29 N
ATOM 15 C8 A A 985 -39.057 -23.767 80.830 1.00 81.16 C
ATOM 16 N7 A A 985 -40.299 -23.484 80.513 1.00 80.97 N
ATOM 17 C5 A A 985 -40.525 -22.238 81.070 1.00 79.92 C
ATOM 18 C6 A A 985 -41.623 -21.391 81.098 1.00 79.28 C
ATOM 19 N6 A A 985 -42.769 -21.684 80.513 1.00 79.62 N
ATOM 20 N1 A A 985 -41.520 -20.216 81.739 1.00 78.33 N
ATOM 21 C2 A A 985 -40.360 -19.901 82.321 1.00 78.01 C
ATOM 22 N3 A A 985 -39.239 -20.614 82.374 1.00 78.54 N
ATOM 23 C4 A A 985 -39.402 -21.784 81.714 1.00 79.50 C
ATOM 24 P U A 986 -33.743 -22.529 84.868 1.00 90.42 P
ATOM 25 OP1 U A 986 -32.808 -23.548 84.368 1.00 91.30 O
ATOM 26 OP2 U A 986 -34.119 -22.536 86.294 1.00 90.68 O
ATOM 27 O5' U A 986 -33.226 -21.101 84.456 1.00 89.09 O
TER
ATOM 1 O3' A B 987 -38.410 -18.689 90.153 1.00 69.66 O
ATOM 2 P C B 988 -38.479 -19.650 91.439 1.00 76.25 P
ATOM 3 OP1 C B 988 -38.351 -18.774 92.638 1.00 75.85 O
ATOM 4 OP2 C B 988 -37.496 -20.720 91.236 1.00 77.08 O
ATOM 5 O5' C B 988 -39.940 -20.253 91.372 1.00 76.85 O
ATOM 6 C5' C B 988 -41.073 -19.422 91.512 1.00 76.26 C
ATOM 7 C4' C B 988 -42.312 -20.135 91.050 1.00 76.87 C
ATOM 8 O4' C B 988 -42.188 -20.434 89.637 1.00 76.75 O
ATOM 9 C3' C B 988 -42.581 -21.481 91.699 1.00 78.25 C
ATOM 10 O3' C B 988 -43.270 -21.361 92.935 1.00 78.60 O
ATOM 11 C2' C B 988 -43.387 -22.200 90.635 1.00 78.69 C
ATOM 12 O2' C B 988 -44.729 -21.754 90.672 1.00 78.48 O
ATOM 13 C1' C B 988 -42.762 -21.673 89.349 1.00 77.82 C
ATOM 14 N1 C B 988 -41.709 -22.572 88.799 1.00 78.38 N
ATOM 15 C2 C B 988 -42.077 -23.452 87.784 1.00 78.98 C
ATOM 16 O2 C B 988 -43.263 -23.433 87.430 1.00 79.02 O
ATOM 17 N3 C B 988 -41.182 -24.304 87.220 1.00 79.56 N
ATOM 18 C4 C B 988 -39.924 -24.309 87.625 1.00 79.55 C
ATOM 19 N4 C B 988 -39.092 -25.170 87.046 1.00 80.18 N
ATOM 20 C5 C B 988 -39.492 -23.419 88.652 1.00 78.94 C
ATOM 21 C6 C B 988 -40.398 -22.578 89.200 1.00 78.37 C
ATOM 22 P C B 989 -42.473 -21.428 94.330 1.00 82.00 P
ATOM 23 OP1 C B 989 -43.413 -21.038 95.399 1.00 82.13 O
ATOM 24 OP2 C B 989 -41.236 -20.632 94.167 1.00 81.13 O
ATOM 25 O5' C B 989 -42.101 -22.978 94.451 1.00 83.40 O
TER
ATOM 2 P A A 985 -32.895 -25.168 79.562 1.00 82.28 P
ATOM 3 OP1 A A 985 -31.554 -24.652 79.884 1.00 81.88 O
ATOM 4 OP2 A A 985 -33.105 -26.614 79.573 1.00 83.65 O
ATOM 5 O5' A A 985 -33.988 -24.436 80.478 1.00 81.64 O
ATOM 6 C5' A A 985 -34.109 -23.001 80.468 1.00 80.32 C
ATOM 7 C4' A A 985 -34.887 -22.461 81.651 1.00 79.94 C
ATOM 8 O4' A A 985 -36.229 -22.067 81.239 1.00 79.56 O
ATOM 9 C3' A A 985 -35.086 -23.428 82.815 1.00 80.96 C
ATOM 10 O3' A A 985 -35.087 -22.681 84.027 1.00 80.45 O
ATOM 11 C2' A A 985 -36.492 -23.930 82.562 1.00 81.40 C
ATOM 12 O2' A A 985 -37.117 -24.488 83.687 1.00 82.08 O
ATOM 13 C1' A A 985 -37.139 -22.631 82.148 1.00 80.18 C
ATOM 14 N9 A A 985 -38.454 -22.760 81.534 1.00 80.29 N
ATOM 15 C8 A A 985 -39.057 -23.767 80.830 1.00 81.16 C
ATOM 16 N7 A A 985 -40.299 -23.484 80.513 1.00 80.97 N
ATOM 17 C5 A A 985 -40.525 -22.238 81.070 1.00 79.92 C
ATOM 18 C6 A A 985 -41.623 -21.391 81.098 1.00 79.28 C
ATOM 19 N6 A A 985 -42.769 -21.684 80.513 1.00 79.62 N
ATOM 20 N1 A A 985 -41.520 -20.216 81.739 1.00 78.33 N
ATOM 21 C2 A A 985 -40.360 -19.901 82.321 1.00 78.01 C
ATOM 22 N3 A A 985 -39.239 -20.614 82.374 1.00 78.54 N
ATOM 23 C4 A A 985 -39.402 -21.784 81.714 1.00 79.50 C
ATOM 24 P U A 986 -33.743 -22.529 84.868 1.00 90.42 P
ATOM 25 OP1 U A 986 -32.808 -23.548 84.368 1.00 91.30 O
ATOM 26 OP2 U A 986 -34.119 -22.536 86.294 1.00 90.68 O
ATOM 27 O5' U A 986 -33.226 -21.101 84.456 1.00 89.09 O
TER
ATOM 1 O3' A B 987 -38.410 -18.689 90.153 1.00 69.66 O
ATOM 2 P C B 988 -38.479 -19.650 91.439 1.00 76.25 P
ATOM 3 OP1 C B 988 -38.351 -18.774 92.638 1.00 75.85 O
ATOM 4 OP2 C B 988 -37.496 -20.720 91.236 1.00 77.08 O
ATOM 5 O5' C B 988 -39.940 -20.253 91.372 1.00 76.85 O
ATOM 6 C5' C B 988 -41.073 -19.422 91.512 1.00 76.26 C
ATOM 7 C4' C B 988 -42.312 -20.135 91.050 1.00 76.87 C
ATOM 8 O4' C B 988 -42.188 -20.434 89.637 1.00 76.75 O
ATOM 9 C3' C B 988 -42.581 -21.481 91.699 1.00 78.25 C
ATOM 10 O3' C B 988 -43.270 -21.361 92.935 1.00 78.60 O
ATOM 11 C2' C B 988 -43.387 -22.200 90.635 1.00 78.69 C
ATOM 12 O2' C B 988 -44.729 -21.754 90.672 1.00 78.48 O
ATOM 13 C1' C B 988 -42.762 -21.673 89.349 1.00 77.82 C
ATOM 14 N1 C B 988 -41.709 -22.572 88.799 1.00 78.38 N
ATOM 15 C2 C B 988 -42.077 -23.452 87.784 1.00 78.98 C
ATOM 16 O2 C B 988 -43.263 -23.433 87.430 1.00 79.02 O
ATOM 17 N3 C B 988 -41.182 -24.304 87.220 1.00 79.56 N
ATOM 18 C4 C B 988 -39.924 -24.309 87.625 1.00 79.55 C
ATOM 19 N4 C B 988 -39.092 -25.170 87.046 1.00 80.18 N
ATOM 20 C5 C B 988 -39.492 -23.419 88.652 1.00 78.94 C
ATOM 21 C6 C B 988 -40.398 -22.578 89.200 1.00 78.37 C
ATOM 22 P C B 989 -42.473 -21.428 94.330 1.00 82.00 P
ATOM 23 OP1 C B 989 -43.413 -21.038 95.399 1.00 82.13 O
ATOM 24 OP2 C B 989 -41.236 -20.632 94.167 1.00 81.13 O
ATOM 25 O5' C B 989 -42.101 -22.978 94.451 1.00 83.40 O
TER
Atoms:
OP1: (-31.554,-24.652,79.884)
OP2: (-33.105,-26.614,79.573)
C3': (-35.086,-23.428,82.815)
C1': (-37.139,-22.631,82.148)
C5': (-34.109,-23.001,80.468)
O4': (-36.229,-22.067,81.239)
C8: (-39.057,-23.767,80.830)
O2': (-37.117,-24.488,83.687)
C6: (-41.623,-21.391,81.098)
C5: (-40.525,-22.238,81.070)
C4: (-39.402,-21.784,81.714)
P: (-32.895,-25.168,79.562)
C4': (-34.887,-22.461,81.651)
C2': (-36.492,-23.930,82.562)
C2: (-40.360,-19.901,82.321)
N1: (-41.520,-20.216,81.739)
N3: (-39.239,-20.614,82.374)
N6: (-42.769,-21.684,80.513)
N7: (-40.299,-23.484,80.513)
N9: (-38.454,-22.760,81.534)
O5': (-33.988,-24.436,80.478)
O3': (-35.087,-22.681,84.027)
OP2: (-33.105,-26.614,79.573)
C3': (-35.086,-23.428,82.815)
C1': (-37.139,-22.631,82.148)
C5': (-34.109,-23.001,80.468)
O4': (-36.229,-22.067,81.239)
C8: (-39.057,-23.767,80.830)
O2': (-37.117,-24.488,83.687)
C6: (-41.623,-21.391,81.098)
C5: (-40.525,-22.238,81.070)
C4: (-39.402,-21.784,81.714)
P: (-32.895,-25.168,79.562)
C4': (-34.887,-22.461,81.651)
C2': (-36.492,-23.930,82.562)
C2: (-40.360,-19.901,82.321)
N1: (-41.520,-20.216,81.739)
N3: (-39.239,-20.614,82.374)
N6: (-42.769,-21.684,80.513)
N7: (-40.299,-23.484,80.513)
N9: (-38.454,-22.760,81.534)
O5': (-33.988,-24.436,80.478)
O3': (-35.087,-22.681,84.027)
C2: (-42.077,-23.452,87.784)
OP1: (-38.351,-18.774,92.638)
OP2: (-37.496,-20.720,91.236)
C4: (-39.924,-24.309,87.625)
O5': (-39.940,-20.253,91.372)
C3': (-42.581,-21.481,91.699)
C1': (-42.762,-21.673,89.349)
O4': (-42.188,-20.434,89.637)
C5': (-41.073,-19.422,91.512)
P: (-38.479,-19.650,91.439)
O2: (-43.263,-23.433,87.430)
C4': (-42.312,-20.135,91.050)
C2': (-43.387,-22.200,90.635)
O2': (-44.729,-21.754,90.672)
N1: (-41.709,-22.572,88.799)
N3: (-41.182,-24.304,87.220)
N4: (-39.092,-25.170,87.046)
C6: (-40.398,-22.578,89.200)
C5: (-39.492,-23.419,88.652)
O3': (-43.270,-21.361,92.935)
OP1: (-38.351,-18.774,92.638)
OP2: (-37.496,-20.720,91.236)
C4: (-39.924,-24.309,87.625)
O5': (-39.940,-20.253,91.372)
C3': (-42.581,-21.481,91.699)
C1': (-42.762,-21.673,89.349)
O4': (-42.188,-20.434,89.637)
C5': (-41.073,-19.422,91.512)
P: (-38.479,-19.650,91.439)
O2: (-43.263,-23.433,87.430)
C4': (-42.312,-20.135,91.050)
C2': (-43.387,-22.200,90.635)
O2': (-44.729,-21.754,90.672)
N1: (-41.709,-22.572,88.799)
N3: (-41.182,-24.304,87.220)
N4: (-39.092,-25.170,87.046)
C6: (-40.398,-22.578,89.200)
C5: (-39.492,-23.419,88.652)
O3': (-43.270,-21.361,92.935)
Image (generated by PyMOL):