ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61198:61200

Extra

PDB:
ATOM 1 O3' A A1197 231.676 -47.974 285.651 1.00 72.56 O
ATOM 2 P A A1198 232.579 -46.733 286.148 1.00 67.10 P
ATOM 3 OP1 A A1198 231.762 -45.482 285.996 1.00 67.30 O
ATOM 4 OP2 A A1198 233.852 -46.811 285.441 1.00 66.64 O
ATOM 5 O5' A A1198 232.818 -47.058 287.677 1.00 67.47 O
ATOM 6 C5' A A1198 231.745 -47.157 288.588 1.00 67.98 C
ATOM 7 C4' A A1198 232.250 -47.124 290.009 1.00 68.30 C
ATOM 8 O4' A A1198 232.914 -48.380 290.338 1.00 68.18 O
ATOM 9 C3' A A1198 233.306 -46.077 290.328 1.00 68.22 C
ATOM 10 O3' A A1198 232.768 -44.790 290.516 1.00 68.49 O
ATOM 11 C2' A A1198 233.927 -46.656 291.588 1.00 68.45 C
ATOM 12 O2' A A1198 233.042 -46.520 292.689 1.00 69.02 O
ATOM 13 C1' A A1198 233.994 -48.132 291.215 1.00 68.23 C
ATOM 14 N9 A A1198 235.244 -48.446 290.509 1.00 67.75 N
ATOM 15 C8 A A1198 235.400 -48.870 289.225 1.00 67.32 C
ATOM 16 N7 A A1198 236.649 -49.023 288.869 1.00 67.00 N
ATOM 17 C5 A A1198 237.370 -48.657 289.994 1.00 67.22 C
ATOM 18 C6 A A1198 238.758 -48.617 290.258 1.00 67.10 C
ATOM 19 N6 A A1198 239.723 -48.965 289.400 1.00 66.72 N
ATOM 20 N1 A A1198 239.118 -48.221 291.489 1.00 67.44 N
ATOM 21 C2 A A1198 238.155 -47.885 292.377 1.00 67.87 C
ATOM 22 N3 A A1198 236.827 -47.881 292.255 1.00 68.04 N
ATOM 23 C4 A A1198 236.504 -48.293 291.015 1.00 67.69 C
ATOM 24 P C A1199 232.962 -43.654 289.415 1.00 78.72 P
ATOM 25 OP1 C A1199 231.884 -42.667 289.617 1.00 79.11 O
ATOM 26 OP2 C A1199 233.059 -44.320 288.086 1.00 78.24 O
ATOM 27 O5' C A1199 234.365 -43.034 289.831 1.00 78.60 O
TER

ATOM 1 O3' C B1199 237.403 -41.033 291.183 1.00 78.66 O
ATOM 2 P U B1200 237.242 -39.706 290.311 1.00 72.25 P
ATOM 3 OP1 U B1200 237.998 -38.635 291.013 1.00 72.47 O
ATOM 4 OP2 U B1200 235.793 -39.528 290.061 1.00 72.43 O
ATOM 5 O5' U B1200 237.966 -40.069 288.949 1.00 71.65 O
ATOM 6 C5' U B1200 239.369 -40.196 288.874 1.00 71.43 C
ATOM 7 C4' U B1200 239.779 -40.612 287.493 1.00 70.92 C
ATOM 8 O4' U B1200 239.288 -41.947 287.207 1.00 70.80 O
ATOM 9 C3' U B1200 239.219 -39.759 286.381 1.00 70.71 C
ATOM 10 O3' U B1200 239.982 -38.584 286.201 1.00 70.64 O
ATOM 11 C2' U B1200 239.219 -40.712 285.179 1.00 70.29 C
ATOM 12 O2' U B1200 240.501 -40.794 284.591 1.00 69.98 O
ATOM 13 C1' U B1200 238.923 -42.053 285.846 1.00 70.44 C
ATOM 14 N1 U B1200 237.482 -42.424 285.768 1.00 70.60 N
ATOM 15 C2 U B1200 237.027 -43.144 284.674 1.00 70.33 C
ATOM 16 O2 U B1200 237.786 -43.466 283.762 1.00 69.96 O
ATOM 17 N3 U B1200 235.656 -43.426 284.703 1.00 70.54 N
ATOM 18 C4 U B1200 234.708 -43.106 285.700 1.00 71.01 C
ATOM 19 O4 U B1200 233.488 -43.446 285.655 1.00 71.22 O
ATOM 20 C5 U B1200 235.305 -42.363 286.785 1.00 71.26 C
ATOM 21 C6 U B1200 236.614 -42.069 286.786 1.00 71.05 C
ATOM 22 P C B1201 239.366 -37.302 285.482 1.00 77.27 P
ATOM 23 OP1 C B1201 238.987 -37.711 284.109 1.00 76.88 O
ATOM 24 OP2 C B1201 240.347 -36.208 285.659 1.00 77.29 O
ATOM 25 O5' C B1201 238.067 -37.000 286.335 1.00 77.73 O
TER

Atoms:
OP1: (231.762,-45.482,285.996)
OP2: (233.852,-46.811,285.441)
C3': (233.306,-46.077,290.328)
C1': (233.994,-48.132,291.215)
C5': (231.745,-47.157,288.588)
O4': (232.914,-48.380,290.338)
C8: (235.400,-48.870,289.225)
O2': (233.042,-46.520,292.689)
C6: (238.758,-48.617,290.258)
C5: (237.370,-48.657,289.994)
C4: (236.504,-48.293,291.015)
P: (232.579,-46.733,286.148)
C4': (232.250,-47.124,290.009)
C2': (233.927,-46.656,291.588)
C2: (238.155,-47.885,292.377)
N1: (239.118,-48.221,291.489)
N3: (236.827,-47.881,292.255)
N6: (239.723,-48.965,289.400)
N7: (236.649,-49.023,288.869)
N9: (235.244,-48.446,290.509)
O5': (232.818,-47.058,287.677)
O3': (232.768,-44.790,290.516)
C4: (234.708,-43.106,285.700)
N3: (235.656,-43.426,284.703)
OP1: (237.998,-38.635,291.013)
OP2: (235.793,-39.528,290.061)
C2: (237.027,-43.144,284.674)
C1': (238.923,-42.053,285.846)
C3': (239.219,-39.759,286.381)
O5': (237.966,-40.069,288.949)
O4': (239.288,-41.947,287.207)
C5': (239.369,-40.196,288.874)
P: (237.242,-39.706,290.311)
C4': (239.779,-40.612,287.493)
C2': (239.219,-40.712,285.179)
O2': (240.501,-40.794,284.591)
N1: (237.482,-42.424,285.768)
O4: (233.488,-43.446,285.655)
O2: (237.786,-43.466,283.762)
C6: (236.614,-42.069,286.786)
C5: (235.305,-42.363,286.785)
O3': (239.982,-38.584,286.201)
Image (generated by PyMOL):
PyMOL image
show in jmol