Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A57:A13
Extra
PDB:
ATOM 1 O3' A A 56 9.595 -27.721 -0.674 1.00 30.63 O
ATOM 2 P A A 57 9.842 -28.601 0.648 1.00 30.01 P
ATOM 3 OP1 A A 57 10.700 -27.824 1.580 1.00 30.21 O
ATOM 4 OP2 A A 57 10.272 -29.957 0.215 1.00 30.37 O
ATOM 5 O5' A A 57 8.394 -28.702 1.297 1.00 28.79 O
ATOM 6 C5' A A 57 7.755 -27.518 1.799 1.00 27.66 C
ATOM 7 C4' A A 57 6.295 -27.768 2.057 1.00 25.54 C
ATOM 8 O4' A A 57 5.619 -28.089 0.817 1.00 24.96 O
ATOM 9 C3' A A 57 5.978 -28.934 2.970 1.00 25.25 C
ATOM 10 O3' A A 57 6.088 -28.576 4.333 1.00 25.52 O
ATOM 11 C2' A A 57 4.548 -29.278 2.582 1.00 24.68 C
ATOM 12 O2' A A 57 3.634 -28.405 3.214 1.00 24.67 O
ATOM 13 C1' A A 57 4.557 -28.990 1.080 1.00 23.85 C
ATOM 14 N9 A A 57 4.720 -30.163 0.219 1.00 21.61 N
ATOM 15 C8 A A 57 5.883 -30.737 -0.219 1.00 21.53 C
ATOM 16 N7 A A 57 5.702 -31.726 -1.057 1.00 20.72 N
ATOM 17 C5 A A 57 4.326 -31.825 -1.164 1.00 20.16 C
ATOM 18 C6 A A 57 3.498 -32.672 -1.911 1.00 20.76 C
ATOM 19 N6 A A 57 3.950 -33.620 -2.724 1.00 23.22 N
ATOM 20 N1 A A 57 2.165 -32.512 -1.794 1.00 20.96 N
ATOM 21 C2 A A 57 1.707 -31.573 -0.965 1.00 21.51 C
ATOM 22 N3 A A 57 2.384 -30.716 -0.206 1.00 21.58 N
ATOM 23 C4 A A 57 3.708 -30.891 -0.360 1.00 21.17 C
ATOM 24 P U A 58 6.550 -29.681 5.400 1.00 26.34 P
ATOM 25 OP1 U A 58 6.882 -28.960 6.657 1.00 25.72 O
ATOM 26 OP2 U A 58 7.580 -30.551 4.763 1.00 26.58 O
ATOM 27 O5' U A 58 5.242 -30.574 5.612 1.00 26.16 O
TER
ATOM 1 O3' G B 12 -3.750 -29.328 6.936 1.00 21.25 O
ATOM 2 P C B 13 -3.502 -27.827 6.479 1.00 22.40 P
ATOM 3 OP1 C B 13 -2.942 -27.080 7.634 1.00 22.41 O
ATOM 4 OP2 C B 13 -4.751 -27.345 5.824 1.00 20.68 O
ATOM 5 O5' C B 13 -2.374 -28.005 5.366 1.00 22.62 O
ATOM 6 C5' C B 13 -1.194 -28.781 5.641 1.00 22.83 C
ATOM 7 C4' C B 13 -0.454 -29.105 4.361 1.00 24.44 C
ATOM 8 O4' C B 13 -1.127 -30.150 3.613 1.00 24.44 O
ATOM 9 C3' C B 13 -0.294 -27.970 3.366 1.00 24.72 C
ATOM 10 O3' C B 13 0.779 -27.117 3.699 1.00 24.59 O
ATOM 11 C2' C B 13 -0.040 -28.707 2.060 1.00 24.83 C
ATOM 12 O2' C B 13 1.309 -29.116 1.937 1.00 24.23 O
ATOM 13 C1' C B 13 -0.934 -29.937 2.222 1.00 25.05 C
ATOM 14 N1 C B 13 -2.249 -29.754 1.577 1.00 26.24 N
ATOM 15 C2 C B 13 -2.379 -30.023 0.204 1.00 26.86 C
ATOM 16 O2 C B 13 -1.387 -30.395 -0.435 1.00 26.37 O
ATOM 17 N3 C B 13 -3.584 -29.862 -0.391 1.00 28.08 N
ATOM 18 C4 C B 13 -4.628 -29.436 0.323 1.00 28.69 C
ATOM 19 N4 C B 13 -5.792 -29.271 -0.310 1.00 29.73 N
ATOM 20 C5 C B 13 -4.525 -29.155 1.715 1.00 28.36 C
ATOM 21 C6 C B 13 -3.331 -29.326 2.297 1.00 27.37 C
ATOM 22 P U B 14 0.644 -25.548 3.420 1.00 25.73 P
ATOM 23 OP1 U B 14 1.850 -24.859 3.957 1.00 26.68 O
ATOM 24 OP2 U B 14 -0.709 -25.138 3.882 1.00 24.83 O
ATOM 25 O5' U B 14 0.694 -25.445 1.836 1.00 27.06 O
TER
ATOM 2 P A A 57 9.842 -28.601 0.648 1.00 30.01 P
ATOM 3 OP1 A A 57 10.700 -27.824 1.580 1.00 30.21 O
ATOM 4 OP2 A A 57 10.272 -29.957 0.215 1.00 30.37 O
ATOM 5 O5' A A 57 8.394 -28.702 1.297 1.00 28.79 O
ATOM 6 C5' A A 57 7.755 -27.518 1.799 1.00 27.66 C
ATOM 7 C4' A A 57 6.295 -27.768 2.057 1.00 25.54 C
ATOM 8 O4' A A 57 5.619 -28.089 0.817 1.00 24.96 O
ATOM 9 C3' A A 57 5.978 -28.934 2.970 1.00 25.25 C
ATOM 10 O3' A A 57 6.088 -28.576 4.333 1.00 25.52 O
ATOM 11 C2' A A 57 4.548 -29.278 2.582 1.00 24.68 C
ATOM 12 O2' A A 57 3.634 -28.405 3.214 1.00 24.67 O
ATOM 13 C1' A A 57 4.557 -28.990 1.080 1.00 23.85 C
ATOM 14 N9 A A 57 4.720 -30.163 0.219 1.00 21.61 N
ATOM 15 C8 A A 57 5.883 -30.737 -0.219 1.00 21.53 C
ATOM 16 N7 A A 57 5.702 -31.726 -1.057 1.00 20.72 N
ATOM 17 C5 A A 57 4.326 -31.825 -1.164 1.00 20.16 C
ATOM 18 C6 A A 57 3.498 -32.672 -1.911 1.00 20.76 C
ATOM 19 N6 A A 57 3.950 -33.620 -2.724 1.00 23.22 N
ATOM 20 N1 A A 57 2.165 -32.512 -1.794 1.00 20.96 N
ATOM 21 C2 A A 57 1.707 -31.573 -0.965 1.00 21.51 C
ATOM 22 N3 A A 57 2.384 -30.716 -0.206 1.00 21.58 N
ATOM 23 C4 A A 57 3.708 -30.891 -0.360 1.00 21.17 C
ATOM 24 P U A 58 6.550 -29.681 5.400 1.00 26.34 P
ATOM 25 OP1 U A 58 6.882 -28.960 6.657 1.00 25.72 O
ATOM 26 OP2 U A 58 7.580 -30.551 4.763 1.00 26.58 O
ATOM 27 O5' U A 58 5.242 -30.574 5.612 1.00 26.16 O
TER
ATOM 1 O3' G B 12 -3.750 -29.328 6.936 1.00 21.25 O
ATOM 2 P C B 13 -3.502 -27.827 6.479 1.00 22.40 P
ATOM 3 OP1 C B 13 -2.942 -27.080 7.634 1.00 22.41 O
ATOM 4 OP2 C B 13 -4.751 -27.345 5.824 1.00 20.68 O
ATOM 5 O5' C B 13 -2.374 -28.005 5.366 1.00 22.62 O
ATOM 6 C5' C B 13 -1.194 -28.781 5.641 1.00 22.83 C
ATOM 7 C4' C B 13 -0.454 -29.105 4.361 1.00 24.44 C
ATOM 8 O4' C B 13 -1.127 -30.150 3.613 1.00 24.44 O
ATOM 9 C3' C B 13 -0.294 -27.970 3.366 1.00 24.72 C
ATOM 10 O3' C B 13 0.779 -27.117 3.699 1.00 24.59 O
ATOM 11 C2' C B 13 -0.040 -28.707 2.060 1.00 24.83 C
ATOM 12 O2' C B 13 1.309 -29.116 1.937 1.00 24.23 O
ATOM 13 C1' C B 13 -0.934 -29.937 2.222 1.00 25.05 C
ATOM 14 N1 C B 13 -2.249 -29.754 1.577 1.00 26.24 N
ATOM 15 C2 C B 13 -2.379 -30.023 0.204 1.00 26.86 C
ATOM 16 O2 C B 13 -1.387 -30.395 -0.435 1.00 26.37 O
ATOM 17 N3 C B 13 -3.584 -29.862 -0.391 1.00 28.08 N
ATOM 18 C4 C B 13 -4.628 -29.436 0.323 1.00 28.69 C
ATOM 19 N4 C B 13 -5.792 -29.271 -0.310 1.00 29.73 N
ATOM 20 C5 C B 13 -4.525 -29.155 1.715 1.00 28.36 C
ATOM 21 C6 C B 13 -3.331 -29.326 2.297 1.00 27.37 C
ATOM 22 P U B 14 0.644 -25.548 3.420 1.00 25.73 P
ATOM 23 OP1 U B 14 1.850 -24.859 3.957 1.00 26.68 O
ATOM 24 OP2 U B 14 -0.709 -25.138 3.882 1.00 24.83 O
ATOM 25 O5' U B 14 0.694 -25.445 1.836 1.00 27.06 O
TER
Atoms:
OP1: (10.700,-27.824,1.580)
OP2: (10.272,-29.957,0.215)
C3': (5.978,-28.934,2.970)
C1': (4.557,-28.990,1.080)
C5': (7.755,-27.518,1.799)
O4': (5.619,-28.089,0.817)
C8: (5.883,-30.737,-0.219)
O2': (3.634,-28.405,3.214)
C6: (3.498,-32.672,-1.911)
C5: (4.326,-31.825,-1.164)
C4: (3.708,-30.891,-0.360)
P: (9.842,-28.601,0.648)
C4': (6.295,-27.768,2.057)
C2': (4.548,-29.278,2.582)
C2: (1.707,-31.573,-0.965)
N1: (2.165,-32.512,-1.794)
N3: (2.384,-30.716,-0.206)
N6: (3.950,-33.620,-2.724)
N7: (5.702,-31.726,-1.057)
N9: (4.720,-30.163,0.219)
O5': (8.394,-28.702,1.297)
O3': (6.088,-28.576,4.333)
OP2: (10.272,-29.957,0.215)
C3': (5.978,-28.934,2.970)
C1': (4.557,-28.990,1.080)
C5': (7.755,-27.518,1.799)
O4': (5.619,-28.089,0.817)
C8: (5.883,-30.737,-0.219)
O2': (3.634,-28.405,3.214)
C6: (3.498,-32.672,-1.911)
C5: (4.326,-31.825,-1.164)
C4: (3.708,-30.891,-0.360)
P: (9.842,-28.601,0.648)
C4': (6.295,-27.768,2.057)
C2': (4.548,-29.278,2.582)
C2: (1.707,-31.573,-0.965)
N1: (2.165,-32.512,-1.794)
N3: (2.384,-30.716,-0.206)
N6: (3.950,-33.620,-2.724)
N7: (5.702,-31.726,-1.057)
N9: (4.720,-30.163,0.219)
O5': (8.394,-28.702,1.297)
O3': (6.088,-28.576,4.333)
C2: (-2.379,-30.023,0.204)
OP1: (-2.942,-27.080,7.634)
OP2: (-4.751,-27.345,5.824)
C4: (-4.628,-29.436,0.323)
O5': (-2.374,-28.005,5.366)
C3': (-0.294,-27.970,3.366)
C1': (-0.934,-29.937,2.222)
O4': (-1.127,-30.150,3.613)
C5': (-1.194,-28.781,5.641)
P: (-3.502,-27.827,6.479)
O2: (-1.387,-30.395,-0.435)
C4': (-0.454,-29.105,4.361)
C2': (-0.040,-28.707,2.060)
O2': (1.309,-29.116,1.937)
N1: (-2.249,-29.754,1.577)
N3: (-3.584,-29.862,-0.391)
N4: (-5.792,-29.271,-0.310)
C6: (-3.331,-29.326,2.297)
C5: (-4.525,-29.155,1.715)
O3': (0.779,-27.117,3.699)
OP1: (-2.942,-27.080,7.634)
OP2: (-4.751,-27.345,5.824)
C4: (-4.628,-29.436,0.323)
O5': (-2.374,-28.005,5.366)
C3': (-0.294,-27.970,3.366)
C1': (-0.934,-29.937,2.222)
O4': (-1.127,-30.150,3.613)
C5': (-1.194,-28.781,5.641)
P: (-3.502,-27.827,6.479)
O2: (-1.387,-30.395,-0.435)
C4': (-0.454,-29.105,4.361)
C2': (-0.040,-28.707,2.060)
O2': (1.309,-29.116,1.937)
N1: (-2.249,-29.754,1.577)
N3: (-3.584,-29.862,-0.391)
N4: (-5.792,-29.271,-0.310)
C6: (-3.331,-29.326,2.297)
C5: (-4.525,-29.155,1.715)
O3': (0.779,-27.117,3.699)
Image (generated by PyMOL):