Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0279:0349
Extra
PDB:
ATOM 1 O3' C A 278 60.638 127.668 -1.781 1.00 81.48 O
ATOM 2 P C A 279 59.509 128.107 -0.714 1.00 81.69 P
ATOM 3 OP1 C A 279 59.270 129.566 -0.885 1.00 80.84 O
ATOM 4 OP2 C A 279 59.909 127.582 0.618 1.00 82.58 O
ATOM 5 O5' C A 279 58.195 127.330 -1.185 1.00 79.90 O
ATOM 6 C5' C A 279 57.607 127.587 -2.478 1.00 77.61 C
ATOM 7 C4' C A 279 56.437 126.660 -2.728 1.00 76.22 C
ATOM 8 O4' C A 279 56.894 125.282 -2.735 1.00 75.90 O
ATOM 9 C3' C A 279 55.322 126.676 -1.693 1.00 75.49 C
ATOM 10 O3' C A 279 54.416 127.754 -1.929 1.00 75.37 O
ATOM 11 C2' C A 279 54.652 125.326 -1.923 1.00 75.14 C
ATOM 12 O2' C A 279 53.761 125.334 -3.022 1.00 74.42 O
ATOM 13 C1' C A 279 55.854 124.438 -2.264 1.00 74.98 C
ATOM 14 N1 C A 279 56.365 123.615 -1.148 1.00 74.88 N
ATOM 15 C2 C A 279 55.575 122.547 -0.669 1.00 75.24 C
ATOM 16 O2 C A 279 54.440 122.362 -1.153 1.00 76.18 O
ATOM 17 N3 C A 279 56.065 121.752 0.314 1.00 74.83 N
ATOM 18 C4 C A 279 57.274 121.994 0.830 1.00 75.12 C
ATOM 19 N4 C A 279 57.726 121.169 1.785 1.00 74.91 N
ATOM 20 C5 C A 279 58.079 123.090 0.388 1.00 74.86 C
ATOM 21 C6 C A 279 57.592 123.864 -0.593 1.00 74.88 C
ATOM 22 P G A 280 53.883 128.646 -0.698 1.00 75.15 P
ATOM 23 OP1 G A 280 52.990 129.693 -1.266 1.00 74.68 O
ATOM 24 OP2 G A 280 55.063 129.047 0.119 1.00 74.70 O
ATOM 25 O5' G A 280 52.979 127.650 0.159 1.00 74.62 O
TER
ATOM 1 O3' A B 348 53.461 112.912 4.423 1.00 84.45 O
ATOM 2 P C B 349 54.200 112.627 3.027 1.00 86.61 P
ATOM 3 OP1 C B 349 54.293 111.152 2.873 1.00 87.11 O
ATOM 4 OP2 C B 349 55.437 113.453 2.983 1.00 87.31 O
ATOM 5 O5' C B 349 53.184 113.183 1.932 1.00 85.39 O
ATOM 6 C5' C B 349 51.856 112.641 1.816 1.00 85.65 C
ATOM 7 C4' C B 349 51.001 113.542 0.961 1.00 86.64 C
ATOM 8 O4' C B 349 50.897 114.845 1.600 1.00 86.62 O
ATOM 9 C3' C B 349 51.563 113.852 -0.418 1.00 87.65 C
ATOM 10 O3' C B 349 51.309 112.797 -1.352 1.00 89.45 O
ATOM 11 C2' C B 349 50.870 115.170 -0.755 1.00 86.52 C
ATOM 12 O2' C B 349 49.525 115.008 -1.163 1.00 85.77 O
ATOM 13 C1' C B 349 50.887 115.866 0.610 1.00 85.48 C
ATOM 14 N1 C B 349 52.067 116.734 0.816 1.00 84.02 N
ATOM 15 C2 C B 349 51.994 118.082 0.423 1.00 83.64 C
ATOM 16 O2 C B 349 50.940 118.508 -0.084 1.00 83.62 O
ATOM 17 N3 C B 349 53.074 118.885 0.607 1.00 82.87 N
ATOM 18 C4 C B 349 54.189 118.390 1.157 1.00 82.82 C
ATOM 19 N4 C B 349 55.227 119.217 1.320 1.00 81.99 N
ATOM 20 C5 C B 349 54.289 117.025 1.564 1.00 82.56 C
ATOM 21 C6 C B 349 53.217 116.242 1.378 1.00 83.25 C
ATOM 22 P G B 350 52.444 112.377 -2.424 1.00 90.76 P
ATOM 23 OP1 G B 350 51.884 111.252 -3.226 1.00 90.26 O
ATOM 24 OP2 G B 350 53.749 112.194 -1.716 1.00 89.18 O
ATOM 25 O5' G B 350 52.558 113.654 -3.380 1.00 89.95 O
TER
ATOM 2 P C A 279 59.509 128.107 -0.714 1.00 81.69 P
ATOM 3 OP1 C A 279 59.270 129.566 -0.885 1.00 80.84 O
ATOM 4 OP2 C A 279 59.909 127.582 0.618 1.00 82.58 O
ATOM 5 O5' C A 279 58.195 127.330 -1.185 1.00 79.90 O
ATOM 6 C5' C A 279 57.607 127.587 -2.478 1.00 77.61 C
ATOM 7 C4' C A 279 56.437 126.660 -2.728 1.00 76.22 C
ATOM 8 O4' C A 279 56.894 125.282 -2.735 1.00 75.90 O
ATOM 9 C3' C A 279 55.322 126.676 -1.693 1.00 75.49 C
ATOM 10 O3' C A 279 54.416 127.754 -1.929 1.00 75.37 O
ATOM 11 C2' C A 279 54.652 125.326 -1.923 1.00 75.14 C
ATOM 12 O2' C A 279 53.761 125.334 -3.022 1.00 74.42 O
ATOM 13 C1' C A 279 55.854 124.438 -2.264 1.00 74.98 C
ATOM 14 N1 C A 279 56.365 123.615 -1.148 1.00 74.88 N
ATOM 15 C2 C A 279 55.575 122.547 -0.669 1.00 75.24 C
ATOM 16 O2 C A 279 54.440 122.362 -1.153 1.00 76.18 O
ATOM 17 N3 C A 279 56.065 121.752 0.314 1.00 74.83 N
ATOM 18 C4 C A 279 57.274 121.994 0.830 1.00 75.12 C
ATOM 19 N4 C A 279 57.726 121.169 1.785 1.00 74.91 N
ATOM 20 C5 C A 279 58.079 123.090 0.388 1.00 74.86 C
ATOM 21 C6 C A 279 57.592 123.864 -0.593 1.00 74.88 C
ATOM 22 P G A 280 53.883 128.646 -0.698 1.00 75.15 P
ATOM 23 OP1 G A 280 52.990 129.693 -1.266 1.00 74.68 O
ATOM 24 OP2 G A 280 55.063 129.047 0.119 1.00 74.70 O
ATOM 25 O5' G A 280 52.979 127.650 0.159 1.00 74.62 O
TER
ATOM 1 O3' A B 348 53.461 112.912 4.423 1.00 84.45 O
ATOM 2 P C B 349 54.200 112.627 3.027 1.00 86.61 P
ATOM 3 OP1 C B 349 54.293 111.152 2.873 1.00 87.11 O
ATOM 4 OP2 C B 349 55.437 113.453 2.983 1.00 87.31 O
ATOM 5 O5' C B 349 53.184 113.183 1.932 1.00 85.39 O
ATOM 6 C5' C B 349 51.856 112.641 1.816 1.00 85.65 C
ATOM 7 C4' C B 349 51.001 113.542 0.961 1.00 86.64 C
ATOM 8 O4' C B 349 50.897 114.845 1.600 1.00 86.62 O
ATOM 9 C3' C B 349 51.563 113.852 -0.418 1.00 87.65 C
ATOM 10 O3' C B 349 51.309 112.797 -1.352 1.00 89.45 O
ATOM 11 C2' C B 349 50.870 115.170 -0.755 1.00 86.52 C
ATOM 12 O2' C B 349 49.525 115.008 -1.163 1.00 85.77 O
ATOM 13 C1' C B 349 50.887 115.866 0.610 1.00 85.48 C
ATOM 14 N1 C B 349 52.067 116.734 0.816 1.00 84.02 N
ATOM 15 C2 C B 349 51.994 118.082 0.423 1.00 83.64 C
ATOM 16 O2 C B 349 50.940 118.508 -0.084 1.00 83.62 O
ATOM 17 N3 C B 349 53.074 118.885 0.607 1.00 82.87 N
ATOM 18 C4 C B 349 54.189 118.390 1.157 1.00 82.82 C
ATOM 19 N4 C B 349 55.227 119.217 1.320 1.00 81.99 N
ATOM 20 C5 C B 349 54.289 117.025 1.564 1.00 82.56 C
ATOM 21 C6 C B 349 53.217 116.242 1.378 1.00 83.25 C
ATOM 22 P G B 350 52.444 112.377 -2.424 1.00 90.76 P
ATOM 23 OP1 G B 350 51.884 111.252 -3.226 1.00 90.26 O
ATOM 24 OP2 G B 350 53.749 112.194 -1.716 1.00 89.18 O
ATOM 25 O5' G B 350 52.558 113.654 -3.380 1.00 89.95 O
TER
Atoms:
C2: (55.575,122.547,-0.669)
OP1: (59.270,129.566,-0.885)
OP2: (59.909,127.582,0.618)
C4: (57.274,121.994,0.830)
O5': (58.195,127.330,-1.185)
C3': (55.322,126.676,-1.693)
C1': (55.854,124.438,-2.264)
O4': (56.894,125.282,-2.735)
C5': (57.607,127.587,-2.478)
P: (59.509,128.107,-0.714)
O2: (54.440,122.362,-1.153)
C4': (56.437,126.660,-2.728)
C2': (54.652,125.326,-1.923)
O2': (53.761,125.334,-3.022)
N1: (56.365,123.615,-1.148)
N3: (56.065,121.752,0.314)
N4: (57.726,121.169,1.785)
C6: (57.592,123.864,-0.593)
C5: (58.079,123.090,0.388)
O3': (54.416,127.754,-1.929)
OP1: (59.270,129.566,-0.885)
OP2: (59.909,127.582,0.618)
C4: (57.274,121.994,0.830)
O5': (58.195,127.330,-1.185)
C3': (55.322,126.676,-1.693)
C1': (55.854,124.438,-2.264)
O4': (56.894,125.282,-2.735)
C5': (57.607,127.587,-2.478)
P: (59.509,128.107,-0.714)
O2: (54.440,122.362,-1.153)
C4': (56.437,126.660,-2.728)
C2': (54.652,125.326,-1.923)
O2': (53.761,125.334,-3.022)
N1: (56.365,123.615,-1.148)
N3: (56.065,121.752,0.314)
N4: (57.726,121.169,1.785)
C6: (57.592,123.864,-0.593)
C5: (58.079,123.090,0.388)
O3': (54.416,127.754,-1.929)
C2: (51.994,118.082,0.423)
OP1: (54.293,111.152,2.873)
OP2: (55.437,113.453,2.983)
C4: (54.189,118.390,1.157)
O5': (53.184,113.183,1.932)
C3': (51.563,113.852,-0.418)
C1': (50.887,115.866,0.610)
O4': (50.897,114.845,1.600)
C5': (51.856,112.641,1.816)
P: (54.200,112.627,3.027)
O2: (50.940,118.508,-0.084)
C4': (51.001,113.542,0.961)
C2': (50.870,115.170,-0.755)
O2': (49.525,115.008,-1.163)
N1: (52.067,116.734,0.816)
N3: (53.074,118.885,0.607)
N4: (55.227,119.217,1.320)
C6: (53.217,116.242,1.378)
C5: (54.289,117.025,1.564)
O3': (51.309,112.797,-1.352)
OP1: (54.293,111.152,2.873)
OP2: (55.437,113.453,2.983)
C4: (54.189,118.390,1.157)
O5': (53.184,113.183,1.932)
C3': (51.563,113.852,-0.418)
C1': (50.887,115.866,0.610)
O4': (50.897,114.845,1.600)
C5': (51.856,112.641,1.816)
P: (54.200,112.627,3.027)
O2: (50.940,118.508,-0.084)
C4': (51.001,113.542,0.961)
C2': (50.870,115.170,-0.755)
O2': (49.525,115.008,-1.163)
N1: (52.067,116.734,0.816)
N3: (53.074,118.885,0.607)
N4: (55.227,119.217,1.320)
C6: (53.217,116.242,1.378)
C5: (54.289,117.025,1.564)
O3': (51.309,112.797,-1.352)
Image (generated by PyMOL):