ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FFK:0558:0573

Extra

PDB:
ATOM 1 O3' C A 557 -4.316 98.700 121.722 1.00 48.83 O
ATOM 2 P C A 558 -4.640 97.844 123.037 1.00 50.75 P
ATOM 3 OP1 C A 558 -3.943 98.520 124.170 1.00 50.57 O
ATOM 4 OP2 C A 558 -4.370 96.396 122.758 1.00 49.01 O
ATOM 5 O5' C A 558 -6.215 98.032 123.215 1.00 52.34 O
ATOM 6 C5' C A 558 -6.777 99.329 123.492 1.00 54.77 C
ATOM 7 C4' C A 558 -8.275 99.295 123.317 1.00 56.78 C
ATOM 8 O4' C A 558 -8.574 98.901 121.950 1.00 56.54 O
ATOM 9 C3' C A 558 -9.002 98.270 124.180 1.00 58.41 C
ATOM 10 O3' C A 558 -9.306 98.770 125.479 1.00 60.58 O
ATOM 11 C2' C A 558 -10.251 97.963 123.364 1.00 57.71 C
ATOM 12 O2' C A 558 -11.257 98.940 123.536 1.00 57.70 O
ATOM 13 C1' C A 558 -9.713 98.050 121.934 1.00 56.69 C
ATOM 14 N1 C A 558 -9.309 96.735 121.400 1.00 55.09 N
ATOM 15 C2 C A 558 -10.284 95.918 120.811 1.00 55.09 C
ATOM 16 O2 C A 558 -11.461 96.320 120.767 1.00 55.73 O
ATOM 17 N3 C A 558 -9.921 94.714 120.305 1.00 54.28 N
ATOM 18 C4 C A 558 -8.645 94.322 120.363 1.00 53.98 C
ATOM 19 N4 C A 558 -8.328 93.142 119.822 1.00 54.25 N
ATOM 20 C5 C A 558 -7.636 95.127 120.969 1.00 53.66 C
ATOM 21 C6 C A 558 -8.008 96.313 121.471 1.00 54.39 C
ATOM 22 P G A 559 -9.065 97.823 126.766 1.00 63.66 P
ATOM 23 OP1 G A 559 -9.410 98.636 127.974 1.00 63.41 O
ATOM 24 OP2 G A 559 -7.712 97.174 126.672 1.00 63.12 O
ATOM 25 O5' G A 559 -10.149 96.665 126.598 1.00 64.01 O
TER

ATOM 1 O3' C B 572 -10.981 84.049 116.346 1.00 54.04 O
ATOM 2 P C B 573 -10.880 84.781 114.916 1.00 54.32 P
ATOM 3 OP1 C B 573 -11.827 84.088 113.973 1.00 53.16 O
ATOM 4 OP2 C B 573 -9.432 84.861 114.564 1.00 53.99 O
ATOM 5 O5' C B 573 -11.418 86.259 115.203 1.00 53.24 O
ATOM 6 C5' C B 573 -12.773 86.478 115.610 1.00 53.57 C
ATOM 7 C4' C B 573 -12.936 87.858 116.215 1.00 54.53 C
ATOM 8 O4' C B 573 -12.090 88.003 117.386 1.00 55.43 O
ATOM 9 C3' C B 573 -12.568 89.039 115.331 1.00 54.90 C
ATOM 10 O3' C B 573 -13.645 89.402 114.477 1.00 54.10 O
ATOM 11 C2' C B 573 -12.285 90.140 116.346 1.00 55.88 C
ATOM 12 O2' C B 573 -13.476 90.755 116.800 1.00 56.21 O
ATOM 13 C1' C B 573 -11.656 89.355 117.499 1.00 56.13 C
ATOM 14 N1 C B 573 -10.176 89.392 117.478 1.00 57.22 N
ATOM 15 C2 C B 573 -9.503 90.509 118.031 1.00 57.83 C
ATOM 16 O2 C B 573 -10.169 91.450 118.512 1.00 57.41 O
ATOM 17 N3 C B 573 -8.143 90.531 118.020 1.00 58.12 N
ATOM 18 C4 C B 573 -7.461 89.514 117.478 1.00 58.73 C
ATOM 19 N4 C B 573 -6.122 89.584 117.468 1.00 58.79 N
ATOM 20 C5 C B 573 -8.119 88.378 116.911 1.00 58.92 C
ATOM 21 C6 C B 573 -9.459 88.359 116.931 1.00 58.36 C
ATOM 22 P A B 574 -13.334 89.937 112.994 1.00 53.20 P
ATOM 23 OP1 A B 574 -12.615 91.235 113.146 1.00 53.98 O
ATOM 24 OP2 A B 574 -14.596 89.889 112.207 1.00 54.36 O
ATOM 25 O5' A B 574 -12.343 88.844 112.385 1.00 52.51 O
TER

Atoms:
C2: (-10.284,95.918,120.811)
OP1: (-3.943,98.520,124.170)
OP2: (-4.370,96.396,122.758)
C4: (-8.645,94.322,120.363)
O5': (-6.215,98.032,123.215)
C3': (-9.002,98.270,124.180)
C1': (-9.713,98.050,121.934)
O4': (-8.574,98.901,121.950)
C5': (-6.777,99.329,123.492)
P: (-4.640,97.844,123.037)
O2: (-11.461,96.320,120.767)
C4': (-8.275,99.295,123.317)
C2': (-10.251,97.963,123.364)
O2': (-11.257,98.940,123.536)
N1: (-9.309,96.735,121.400)
N3: (-9.921,94.714,120.305)
N4: (-8.328,93.142,119.822)
C6: (-8.008,96.313,121.471)
C5: (-7.636,95.127,120.969)
O3': (-9.306,98.770,125.479)
C2: (-9.503,90.509,118.031)
OP1: (-11.827,84.088,113.973)
OP2: (-9.432,84.861,114.564)
C4: (-7.461,89.514,117.478)
O5': (-11.418,86.259,115.203)
C3': (-12.568,89.039,115.331)
C1': (-11.656,89.355,117.499)
O4': (-12.090,88.003,117.386)
C5': (-12.773,86.478,115.610)
P: (-10.880,84.781,114.916)
O2: (-10.169,91.450,118.512)
C4': (-12.936,87.858,116.215)
C2': (-12.285,90.140,116.346)
O2': (-13.476,90.755,116.800)
N1: (-10.176,89.392,117.478)
N3: (-8.143,90.531,118.020)
N4: (-6.122,89.584,117.468)
C6: (-9.459,88.359,116.931)
C5: (-8.119,88.378,116.911)
O3': (-13.645,89.402,114.477)
Image (generated by PyMOL):
PyMOL image
show in jmol