Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61184:61188
Extra
PDB:
ATOM 1 O3' A A1183 237.295 -28.868 264.777 1.00 78.46 O
ATOM 2 P C A1184 236.143 -28.270 263.847 1.00 81.94 P
ATOM 3 OP1 C A1184 236.730 -27.119 263.139 1.00 81.76 O
ATOM 4 OP2 C A1184 234.960 -28.059 264.699 1.00 82.25 O
ATOM 5 O5' C A1184 235.867 -29.432 262.829 1.00 81.80 O
ATOM 6 C5' C A1184 236.726 -29.629 261.723 1.00 81.53 C
ATOM 7 C4' C A1184 235.993 -30.265 260.583 1.00 81.47 C
ATOM 8 O4' C A1184 235.284 -31.425 261.073 1.00 81.64 O
ATOM 9 C3' C A1184 234.936 -29.390 259.943 1.00 81.52 C
ATOM 10 O3' C A1184 234.751 -29.819 258.610 1.00 81.39 O
ATOM 11 C2' C A1184 233.701 -29.738 260.750 1.00 81.81 C
ATOM 12 O2' C A1184 232.466 -29.421 260.120 1.00 81.93 O
ATOM 13 C1' C A1184 233.892 -31.235 260.903 1.00 81.82 C
ATOM 14 N1 C A1184 233.210 -31.801 262.067 1.00 82.09 N
ATOM 15 C2 C A1184 232.268 -32.800 261.824 1.00 82.23 C
ATOM 16 O2 C A1184 232.064 -33.150 260.632 1.00 82.12 O
ATOM 17 N3 C A1184 231.647 -33.317 262.916 1.00 82.51 N
ATOM 18 C4 C A1184 231.933 -32.865 264.160 1.00 82.64 C
ATOM 19 N4 C A1184 231.301 -33.396 265.224 1.00 82.93 N
ATOM 20 C5 C A1184 232.887 -31.832 264.396 1.00 82.50 C
ATOM 21 C6 C A1184 233.502 -31.335 263.322 1.00 82.22 C
ATOM 22 P U A1185 235.469 -29.038 257.432 1.00 85.62 P
ATOM 23 OP1 U A1185 236.124 -27.843 258.039 1.00 85.59 O
ATOM 24 OP2 U A1185 234.459 -28.849 256.365 1.00 85.64 O
ATOM 25 O5' U A1185 236.563 -30.065 256.956 1.00 85.47 O
TER
ATOM 1 O3' A B1187 243.265 -31.563 260.578 1.00 76.88 O
ATOM 2 P A B1188 242.382 -32.139 261.786 1.00 68.20 P
ATOM 3 OP1 A B1188 241.354 -31.138 262.091 1.00 68.26 O
ATOM 4 OP2 A B1188 243.321 -32.544 262.858 1.00 68.32 O
ATOM 5 O5' A B1188 241.698 -33.443 261.161 1.00 68.18 O
ATOM 6 C5' A B1188 240.283 -33.572 261.050 1.00 68.24 C
ATOM 7 C4' A B1188 239.612 -33.884 262.377 1.00 68.44 C
ATOM 8 O4' A B1188 238.390 -33.095 262.479 1.00 68.54 O
ATOM 9 C3' A B1188 239.137 -35.329 262.584 1.00 68.54 C
ATOM 10 O3' A B1188 240.130 -36.194 263.115 1.00 68.55 O
ATOM 11 C2' A B1188 237.933 -35.148 263.495 1.00 68.75 C
ATOM 12 O2' A B1188 238.352 -34.825 264.810 1.00 68.87 O
ATOM 13 C1' A B1188 237.312 -33.911 262.868 1.00 68.70 C
ATOM 14 N9 A B1188 236.556 -34.267 261.646 1.00 68.65 N
ATOM 15 C8 A B1188 236.961 -34.064 260.354 1.00 68.45 C
ATOM 16 N7 A B1188 236.162 -34.514 259.442 1.00 68.46 N
ATOM 17 C5 A B1188 235.137 -35.076 260.181 1.00 68.68 C
ATOM 18 C6 A B1188 233.957 -35.742 259.788 1.00 68.83 C
ATOM 19 N6 A B1188 233.621 -35.942 258.513 1.00 68.77 N
ATOM 20 N1 A B1188 233.134 -36.204 260.758 1.00 69.08 N
ATOM 21 C2 A B1188 233.481 -35.998 262.042 1.00 69.16 C
ATOM 22 N3 A B1188 234.568 -35.388 262.534 1.00 69.04 N
ATOM 23 C4 A B1188 235.369 -34.945 261.540 1.00 68.80 C
ATOM 24 P C B1189 240.044 -37.787 262.864 1.00 73.52 P
ATOM 25 OP1 C B1189 240.965 -38.436 263.806 1.00 73.59 O
ATOM 26 OP2 C B1189 240.236 -38.021 261.415 1.00 73.38 O
ATOM 27 O5' C B1189 238.553 -38.116 263.265 1.00 73.68 O
TER
ATOM 2 P C A1184 236.143 -28.270 263.847 1.00 81.94 P
ATOM 3 OP1 C A1184 236.730 -27.119 263.139 1.00 81.76 O
ATOM 4 OP2 C A1184 234.960 -28.059 264.699 1.00 82.25 O
ATOM 5 O5' C A1184 235.867 -29.432 262.829 1.00 81.80 O
ATOM 6 C5' C A1184 236.726 -29.629 261.723 1.00 81.53 C
ATOM 7 C4' C A1184 235.993 -30.265 260.583 1.00 81.47 C
ATOM 8 O4' C A1184 235.284 -31.425 261.073 1.00 81.64 O
ATOM 9 C3' C A1184 234.936 -29.390 259.943 1.00 81.52 C
ATOM 10 O3' C A1184 234.751 -29.819 258.610 1.00 81.39 O
ATOM 11 C2' C A1184 233.701 -29.738 260.750 1.00 81.81 C
ATOM 12 O2' C A1184 232.466 -29.421 260.120 1.00 81.93 O
ATOM 13 C1' C A1184 233.892 -31.235 260.903 1.00 81.82 C
ATOM 14 N1 C A1184 233.210 -31.801 262.067 1.00 82.09 N
ATOM 15 C2 C A1184 232.268 -32.800 261.824 1.00 82.23 C
ATOM 16 O2 C A1184 232.064 -33.150 260.632 1.00 82.12 O
ATOM 17 N3 C A1184 231.647 -33.317 262.916 1.00 82.51 N
ATOM 18 C4 C A1184 231.933 -32.865 264.160 1.00 82.64 C
ATOM 19 N4 C A1184 231.301 -33.396 265.224 1.00 82.93 N
ATOM 20 C5 C A1184 232.887 -31.832 264.396 1.00 82.50 C
ATOM 21 C6 C A1184 233.502 -31.335 263.322 1.00 82.22 C
ATOM 22 P U A1185 235.469 -29.038 257.432 1.00 85.62 P
ATOM 23 OP1 U A1185 236.124 -27.843 258.039 1.00 85.59 O
ATOM 24 OP2 U A1185 234.459 -28.849 256.365 1.00 85.64 O
ATOM 25 O5' U A1185 236.563 -30.065 256.956 1.00 85.47 O
TER
ATOM 1 O3' A B1187 243.265 -31.563 260.578 1.00 76.88 O
ATOM 2 P A B1188 242.382 -32.139 261.786 1.00 68.20 P
ATOM 3 OP1 A B1188 241.354 -31.138 262.091 1.00 68.26 O
ATOM 4 OP2 A B1188 243.321 -32.544 262.858 1.00 68.32 O
ATOM 5 O5' A B1188 241.698 -33.443 261.161 1.00 68.18 O
ATOM 6 C5' A B1188 240.283 -33.572 261.050 1.00 68.24 C
ATOM 7 C4' A B1188 239.612 -33.884 262.377 1.00 68.44 C
ATOM 8 O4' A B1188 238.390 -33.095 262.479 1.00 68.54 O
ATOM 9 C3' A B1188 239.137 -35.329 262.584 1.00 68.54 C
ATOM 10 O3' A B1188 240.130 -36.194 263.115 1.00 68.55 O
ATOM 11 C2' A B1188 237.933 -35.148 263.495 1.00 68.75 C
ATOM 12 O2' A B1188 238.352 -34.825 264.810 1.00 68.87 O
ATOM 13 C1' A B1188 237.312 -33.911 262.868 1.00 68.70 C
ATOM 14 N9 A B1188 236.556 -34.267 261.646 1.00 68.65 N
ATOM 15 C8 A B1188 236.961 -34.064 260.354 1.00 68.45 C
ATOM 16 N7 A B1188 236.162 -34.514 259.442 1.00 68.46 N
ATOM 17 C5 A B1188 235.137 -35.076 260.181 1.00 68.68 C
ATOM 18 C6 A B1188 233.957 -35.742 259.788 1.00 68.83 C
ATOM 19 N6 A B1188 233.621 -35.942 258.513 1.00 68.77 N
ATOM 20 N1 A B1188 233.134 -36.204 260.758 1.00 69.08 N
ATOM 21 C2 A B1188 233.481 -35.998 262.042 1.00 69.16 C
ATOM 22 N3 A B1188 234.568 -35.388 262.534 1.00 69.04 N
ATOM 23 C4 A B1188 235.369 -34.945 261.540 1.00 68.80 C
ATOM 24 P C B1189 240.044 -37.787 262.864 1.00 73.52 P
ATOM 25 OP1 C B1189 240.965 -38.436 263.806 1.00 73.59 O
ATOM 26 OP2 C B1189 240.236 -38.021 261.415 1.00 73.38 O
ATOM 27 O5' C B1189 238.553 -38.116 263.265 1.00 73.68 O
TER
Atoms:
C2: (232.268,-32.800,261.824)
OP1: (236.730,-27.119,263.139)
OP2: (234.960,-28.059,264.699)
C4: (231.933,-32.865,264.160)
O5': (235.867,-29.432,262.829)
C3': (234.936,-29.390,259.943)
C1': (233.892,-31.235,260.903)
O4': (235.284,-31.425,261.073)
C5': (236.726,-29.629,261.723)
P: (236.143,-28.270,263.847)
O2: (232.064,-33.150,260.632)
C4': (235.993,-30.265,260.583)
C2': (233.701,-29.738,260.750)
O2': (232.466,-29.421,260.120)
N1: (233.210,-31.801,262.067)
N3: (231.647,-33.317,262.916)
N4: (231.301,-33.396,265.224)
C6: (233.502,-31.335,263.322)
C5: (232.887,-31.832,264.396)
O3': (234.751,-29.819,258.610)
OP1: (236.730,-27.119,263.139)
OP2: (234.960,-28.059,264.699)
C4: (231.933,-32.865,264.160)
O5': (235.867,-29.432,262.829)
C3': (234.936,-29.390,259.943)
C1': (233.892,-31.235,260.903)
O4': (235.284,-31.425,261.073)
C5': (236.726,-29.629,261.723)
P: (236.143,-28.270,263.847)
O2: (232.064,-33.150,260.632)
C4': (235.993,-30.265,260.583)
C2': (233.701,-29.738,260.750)
O2': (232.466,-29.421,260.120)
N1: (233.210,-31.801,262.067)
N3: (231.647,-33.317,262.916)
N4: (231.301,-33.396,265.224)
C6: (233.502,-31.335,263.322)
C5: (232.887,-31.832,264.396)
O3': (234.751,-29.819,258.610)
OP1: (241.354,-31.138,262.091)
OP2: (243.321,-32.544,262.858)
C3': (239.137,-35.329,262.584)
C1': (237.312,-33.911,262.868)
C5': (240.283,-33.572,261.050)
O4': (238.390,-33.095,262.479)
C8: (236.961,-34.064,260.354)
O2': (238.352,-34.825,264.810)
C6: (233.957,-35.742,259.788)
C5: (235.137,-35.076,260.181)
C4: (235.369,-34.945,261.540)
P: (242.382,-32.139,261.786)
C4': (239.612,-33.884,262.377)
C2': (237.933,-35.148,263.495)
C2: (233.481,-35.998,262.042)
N1: (233.134,-36.204,260.758)
N3: (234.568,-35.388,262.534)
N6: (233.621,-35.942,258.513)
N7: (236.162,-34.514,259.442)
N9: (236.556,-34.267,261.646)
O5': (241.698,-33.443,261.161)
O3': (240.130,-36.194,263.115)
OP2: (243.321,-32.544,262.858)
C3': (239.137,-35.329,262.584)
C1': (237.312,-33.911,262.868)
C5': (240.283,-33.572,261.050)
O4': (238.390,-33.095,262.479)
C8: (236.961,-34.064,260.354)
O2': (238.352,-34.825,264.810)
C6: (233.957,-35.742,259.788)
C5: (235.137,-35.076,260.181)
C4: (235.369,-34.945,261.540)
P: (242.382,-32.139,261.786)
C4': (239.612,-33.884,262.377)
C2': (237.933,-35.148,263.495)
C2: (233.481,-35.998,262.042)
N1: (233.134,-36.204,260.758)
N3: (234.568,-35.388,262.534)
N6: (233.621,-35.942,258.513)
N7: (236.162,-34.514,259.442)
N9: (236.556,-34.267,261.646)
O5': (241.698,-33.443,261.161)
O3': (240.130,-36.194,263.115)
Image (generated by PyMOL):