Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 5.054 79.572 67.944 1.00 50.37 O
ATOM 2 P C A1234 5.330 79.689 66.369 1.00 49.38 P
ATOM 3 OP1 C A1234 4.698 78.501 65.734 1.00 53.56 O
ATOM 4 OP2 C A1234 6.770 79.948 66.157 1.00 50.99 O
ATOM 5 O5' C A1234 4.521 80.986 65.937 1.00 47.70 O
ATOM 6 C5' C A1234 3.097 80.992 65.962 1.00 46.96 C
ATOM 7 C4' C A1234 2.572 82.376 65.693 1.00 49.68 C
ATOM 8 O4' C A1234 2.976 83.263 66.767 1.00 50.25 O
ATOM 9 C3' C A1234 3.094 83.078 64.452 1.00 51.12 C
ATOM 10 O3' C A1234 2.478 82.622 63.254 1.00 52.94 O
ATOM 11 C2' C A1234 2.765 84.530 64.768 1.00 51.65 C
ATOM 12 O2' C A1234 1.407 84.856 64.581 1.00 52.51 O
ATOM 13 C1' C A1234 3.093 84.586 66.263 1.00 51.27 C
ATOM 14 N1 C A1234 4.467 85.072 66.487 1.00 50.59 N
ATOM 15 C2 C A1234 4.703 86.451 66.440 1.00 51.65 C
ATOM 16 O2 C A1234 3.741 87.222 66.268 1.00 52.05 O
ATOM 17 N3 C A1234 5.965 86.910 66.580 1.00 51.61 N
ATOM 18 C4 C A1234 6.966 86.053 66.767 1.00 51.64 C
ATOM 19 N4 C A1234 8.197 86.549 66.878 1.00 53.65 N
ATOM 20 C5 C A1234 6.751 84.646 66.845 1.00 50.94 C
ATOM 21 C6 C A1234 5.499 84.204 66.706 1.00 49.65 C
ATOM 22 P U A1235 3.383 82.349 61.952 1.00 53.91 P
ATOM 23 OP1 U A1235 2.503 81.941 60.831 1.00 57.82 O
ATOM 24 OP2 U A1235 4.504 81.471 62.352 1.00 52.92 O
ATOM 25 O5' U A1235 3.935 83.795 61.588 1.00 55.84 O
TER
ATOM 1 O3' A B1239 8.022 98.307 65.961 1.00 89.78 O
ATOM 2 P C B1240 7.407 98.138 67.439 1.00 88.34 P
ATOM 3 OP1 C B1240 7.490 99.452 68.125 1.00 89.34 O
ATOM 4 OP2 C B1240 8.000 96.935 68.082 1.00 89.26 O
ATOM 5 O5' C B1240 5.868 97.843 67.186 1.00 86.08 O
ATOM 6 C5' C B1240 5.067 97.283 68.226 1.00 81.83 C
ATOM 7 C4' C B1240 3.707 96.918 67.703 1.00 77.98 C
ATOM 8 O4' C B1240 3.827 96.021 66.567 1.00 76.62 O
ATOM 9 C3' C B1240 2.889 96.130 68.702 1.00 76.81 C
ATOM 10 O3' C B1240 2.292 96.990 69.653 1.00 75.44 O
ATOM 11 C2' C B1240 1.897 95.403 67.809 1.00 75.92 C
ATOM 12 O2' C B1240 0.835 96.234 67.383 1.00 75.85 O
ATOM 13 C1' C B1240 2.789 95.049 66.614 1.00 75.09 C
ATOM 14 N1 C B1240 3.407 93.707 66.715 1.00 72.57 N
ATOM 15 C2 C B1240 2.584 92.567 66.647 1.00 71.08 C
ATOM 16 O2 C B1240 1.356 92.710 66.507 1.00 71.78 O
ATOM 17 N3 C B1240 3.148 91.341 66.736 1.00 68.85 N
ATOM 18 C4 C B1240 4.467 91.222 66.886 1.00 67.62 C
ATOM 19 N4 C B1240 4.976 89.994 66.970 1.00 65.88 N
ATOM 20 C5 C B1240 5.324 92.357 66.958 1.00 69.15 C
ATOM 21 C6 C B1240 4.759 93.568 66.870 1.00 70.34 C
ATOM 22 P U B1241 2.338 96.595 71.203 1.00 74.57 P
ATOM 23 OP1 U B1241 1.486 97.575 71.919 1.00 75.38 O
ATOM 24 OP2 U B1241 3.754 96.416 71.612 1.00 72.90 O
ATOM 25 O5' U B1241 1.608 95.182 71.240 1.00 72.63 O
TER
ATOM 2 P C A1234 5.330 79.689 66.369 1.00 49.38 P
ATOM 3 OP1 C A1234 4.698 78.501 65.734 1.00 53.56 O
ATOM 4 OP2 C A1234 6.770 79.948 66.157 1.00 50.99 O
ATOM 5 O5' C A1234 4.521 80.986 65.937 1.00 47.70 O
ATOM 6 C5' C A1234 3.097 80.992 65.962 1.00 46.96 C
ATOM 7 C4' C A1234 2.572 82.376 65.693 1.00 49.68 C
ATOM 8 O4' C A1234 2.976 83.263 66.767 1.00 50.25 O
ATOM 9 C3' C A1234 3.094 83.078 64.452 1.00 51.12 C
ATOM 10 O3' C A1234 2.478 82.622 63.254 1.00 52.94 O
ATOM 11 C2' C A1234 2.765 84.530 64.768 1.00 51.65 C
ATOM 12 O2' C A1234 1.407 84.856 64.581 1.00 52.51 O
ATOM 13 C1' C A1234 3.093 84.586 66.263 1.00 51.27 C
ATOM 14 N1 C A1234 4.467 85.072 66.487 1.00 50.59 N
ATOM 15 C2 C A1234 4.703 86.451 66.440 1.00 51.65 C
ATOM 16 O2 C A1234 3.741 87.222 66.268 1.00 52.05 O
ATOM 17 N3 C A1234 5.965 86.910 66.580 1.00 51.61 N
ATOM 18 C4 C A1234 6.966 86.053 66.767 1.00 51.64 C
ATOM 19 N4 C A1234 8.197 86.549 66.878 1.00 53.65 N
ATOM 20 C5 C A1234 6.751 84.646 66.845 1.00 50.94 C
ATOM 21 C6 C A1234 5.499 84.204 66.706 1.00 49.65 C
ATOM 22 P U A1235 3.383 82.349 61.952 1.00 53.91 P
ATOM 23 OP1 U A1235 2.503 81.941 60.831 1.00 57.82 O
ATOM 24 OP2 U A1235 4.504 81.471 62.352 1.00 52.92 O
ATOM 25 O5' U A1235 3.935 83.795 61.588 1.00 55.84 O
TER
ATOM 1 O3' A B1239 8.022 98.307 65.961 1.00 89.78 O
ATOM 2 P C B1240 7.407 98.138 67.439 1.00 88.34 P
ATOM 3 OP1 C B1240 7.490 99.452 68.125 1.00 89.34 O
ATOM 4 OP2 C B1240 8.000 96.935 68.082 1.00 89.26 O
ATOM 5 O5' C B1240 5.868 97.843 67.186 1.00 86.08 O
ATOM 6 C5' C B1240 5.067 97.283 68.226 1.00 81.83 C
ATOM 7 C4' C B1240 3.707 96.918 67.703 1.00 77.98 C
ATOM 8 O4' C B1240 3.827 96.021 66.567 1.00 76.62 O
ATOM 9 C3' C B1240 2.889 96.130 68.702 1.00 76.81 C
ATOM 10 O3' C B1240 2.292 96.990 69.653 1.00 75.44 O
ATOM 11 C2' C B1240 1.897 95.403 67.809 1.00 75.92 C
ATOM 12 O2' C B1240 0.835 96.234 67.383 1.00 75.85 O
ATOM 13 C1' C B1240 2.789 95.049 66.614 1.00 75.09 C
ATOM 14 N1 C B1240 3.407 93.707 66.715 1.00 72.57 N
ATOM 15 C2 C B1240 2.584 92.567 66.647 1.00 71.08 C
ATOM 16 O2 C B1240 1.356 92.710 66.507 1.00 71.78 O
ATOM 17 N3 C B1240 3.148 91.341 66.736 1.00 68.85 N
ATOM 18 C4 C B1240 4.467 91.222 66.886 1.00 67.62 C
ATOM 19 N4 C B1240 4.976 89.994 66.970 1.00 65.88 N
ATOM 20 C5 C B1240 5.324 92.357 66.958 1.00 69.15 C
ATOM 21 C6 C B1240 4.759 93.568 66.870 1.00 70.34 C
ATOM 22 P U B1241 2.338 96.595 71.203 1.00 74.57 P
ATOM 23 OP1 U B1241 1.486 97.575 71.919 1.00 75.38 O
ATOM 24 OP2 U B1241 3.754 96.416 71.612 1.00 72.90 O
ATOM 25 O5' U B1241 1.608 95.182 71.240 1.00 72.63 O
TER
Atoms:
C2: (4.703,86.451,66.440)
OP1: (4.698,78.501,65.734)
OP2: (6.770,79.948,66.157)
C4: (6.966,86.053,66.767)
O5': (4.521,80.986,65.937)
C3': (3.094,83.078,64.452)
C1': (3.093,84.586,66.263)
O4': (2.976,83.263,66.767)
C5': (3.097,80.992,65.962)
P: (5.330,79.689,66.369)
O2: (3.741,87.222,66.268)
C4': (2.572,82.376,65.693)
C2': (2.765,84.530,64.768)
O2': (1.407,84.856,64.581)
N1: (4.467,85.072,66.487)
N3: (5.965,86.910,66.580)
N4: (8.197,86.549,66.878)
C6: (5.499,84.204,66.706)
C5: (6.751,84.646,66.845)
O3': (2.478,82.622,63.254)
OP1: (4.698,78.501,65.734)
OP2: (6.770,79.948,66.157)
C4: (6.966,86.053,66.767)
O5': (4.521,80.986,65.937)
C3': (3.094,83.078,64.452)
C1': (3.093,84.586,66.263)
O4': (2.976,83.263,66.767)
C5': (3.097,80.992,65.962)
P: (5.330,79.689,66.369)
O2: (3.741,87.222,66.268)
C4': (2.572,82.376,65.693)
C2': (2.765,84.530,64.768)
O2': (1.407,84.856,64.581)
N1: (4.467,85.072,66.487)
N3: (5.965,86.910,66.580)
N4: (8.197,86.549,66.878)
C6: (5.499,84.204,66.706)
C5: (6.751,84.646,66.845)
O3': (2.478,82.622,63.254)
C2: (2.584,92.567,66.647)
OP1: (7.490,99.452,68.125)
OP2: (8.000,96.935,68.082)
C4: (4.467,91.222,66.886)
O5': (5.868,97.843,67.186)
C3': (2.889,96.130,68.702)
C1': (2.789,95.049,66.614)
O4': (3.827,96.021,66.567)
C5': (5.067,97.283,68.226)
P: (7.407,98.138,67.439)
O2: (1.356,92.710,66.507)
C4': (3.707,96.918,67.703)
C2': (1.897,95.403,67.809)
O2': (0.835,96.234,67.383)
N1: (3.407,93.707,66.715)
N3: (3.148,91.341,66.736)
N4: (4.976,89.994,66.970)
C6: (4.759,93.568,66.870)
C5: (5.324,92.357,66.958)
O3': (2.292,96.990,69.653)
OP1: (7.490,99.452,68.125)
OP2: (8.000,96.935,68.082)
C4: (4.467,91.222,66.886)
O5': (5.868,97.843,67.186)
C3': (2.889,96.130,68.702)
C1': (2.789,95.049,66.614)
O4': (3.827,96.021,66.567)
C5': (5.067,97.283,68.226)
P: (7.407,98.138,67.439)
O2: (1.356,92.710,66.507)
C4': (3.707,96.918,67.703)
C2': (1.897,95.403,67.809)
O2': (0.835,96.234,67.383)
N1: (3.407,93.707,66.715)
N3: (3.148,91.341,66.736)
N4: (4.976,89.994,66.970)
C6: (4.759,93.568,66.870)
C5: (5.324,92.357,66.958)
O3': (2.292,96.990,69.653)
Image (generated by PyMOL):