Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A235:A273
Extra
PDB:
ATOM 1 O3' U A 234 -8.346 85.926 103.754 1.00 29.56 O
ATOM 2 P C A 235 -7.889 84.376 103.832 1.00 42.15 P
ATOM 3 OP1 C A 235 -8.008 83.764 102.488 1.00 34.02 O
ATOM 4 OP2 C A 235 -8.607 83.766 104.986 1.00 34.32 O
ATOM 5 O5' C A 235 -6.335 84.454 104.184 1.00 16.21 O
ATOM 6 C5' C A 235 -5.892 85.166 105.353 1.00 14.96 C
ATOM 7 C4' C A 235 -4.459 84.828 105.682 1.00 15.37 C
ATOM 8 O4' C A 235 -4.257 83.399 105.532 1.00 15.51 O
ATOM 9 C3' C A 235 -3.361 85.457 104.841 1.00 13.66 C
ATOM 10 O3' C A 235 -3.046 86.763 105.334 1.00 14.56 O
ATOM 11 C2' C A 235 -2.201 84.490 105.075 1.00 14.60 C
ATOM 12 O2' C A 235 -1.540 84.694 106.306 1.00 14.21 O
ATOM 13 C1' C A 235 -2.914 83.143 105.176 1.00 15.90 C
ATOM 14 N1 C A 235 -2.868 82.417 103.897 1.00 4.78 N
ATOM 15 C2 C A 235 -1.653 81.858 103.494 1.00 4.45 C
ATOM 16 O2 C A 235 -0.680 81.959 104.237 1.00 1.49 O
ATOM 17 N3 C A 235 -1.568 81.233 102.302 1.00 4.81 N
ATOM 18 C4 C A 235 -2.649 81.149 101.518 1.00 3.45 C
ATOM 19 N4 C A 235 -2.526 80.528 100.346 1.00 3.74 N
ATOM 20 C5 C A 235 -3.908 81.698 101.905 1.00 3.32 C
ATOM 21 C6 C A 235 -3.974 82.311 103.096 1.00 2.74 C
ATOM 22 P A A 236 -2.461 87.891 104.344 1.00 40.63 P
ATOM 23 OP1 A A 236 -2.386 89.109 105.173 1.00 29.05 O
ATOM 24 OP2 A A 236 -3.204 87.915 103.056 1.00 27.71 O
ATOM 25 O5' A A 236 -0.970 87.454 104.037 1.00 25.31 O
TER
ATOM 1 O3' A B 272 7.396 76.943 102.944 1.00 25.90 O
ATOM 2 P C B 273 6.555 76.041 103.979 1.00 24.24 P
ATOM 3 OP1 C B 273 7.547 75.187 104.691 1.00 29.78 O
ATOM 4 OP2 C B 273 5.416 75.410 103.267 1.00 28.27 O
ATOM 5 O5' C B 273 5.944 77.083 105.017 1.00 19.72 O
ATOM 6 C5' C B 273 6.778 77.683 106.028 1.00 19.08 C
ATOM 7 C4' C B 273 6.002 78.703 106.830 1.00 18.21 C
ATOM 8 O4' C B 273 5.684 79.828 105.981 1.00 17.55 O
ATOM 9 C3' C B 273 4.662 78.255 107.387 1.00 18.48 C
ATOM 10 O3' C B 273 4.776 77.571 108.624 1.00 19.93 O
ATOM 11 C2' C B 273 3.915 79.568 107.549 1.00 18.79 C
ATOM 12 O2' C B 273 4.276 80.230 108.743 1.00 22.14 O
ATOM 13 C1' C B 273 4.425 80.357 106.346 1.00 17.28 C
ATOM 14 N1 C B 273 3.526 80.242 105.195 1.00 33.97 N
ATOM 15 C2 C B 273 2.347 80.987 105.189 1.00 33.86 C
ATOM 16 O2 C B 273 2.094 81.725 106.157 1.00 33.87 O
ATOM 17 N3 C B 273 1.506 80.882 104.132 1.00 35.51 N
ATOM 18 C4 C B 273 1.803 80.068 103.119 1.00 34.30 C
ATOM 19 N4 C B 273 0.937 79.991 102.108 1.00 32.88 N
ATOM 20 C5 C B 273 2.998 79.297 103.101 1.00 31.99 C
ATOM 21 C6 C B 273 3.825 79.416 104.147 1.00 32.55 C
ATOM 22 P G B 274 3.620 76.540 109.054 1.00 36.06 P
ATOM 23 OP1 G B 274 3.921 76.090 110.444 1.00 46.54 O
ATOM 24 OP2 G B 274 3.478 75.535 107.963 1.00 45.22 O
ATOM 25 O5' G B 274 2.288 77.419 109.072 1.00 28.37 O
TER
ATOM 2 P C A 235 -7.889 84.376 103.832 1.00 42.15 P
ATOM 3 OP1 C A 235 -8.008 83.764 102.488 1.00 34.02 O
ATOM 4 OP2 C A 235 -8.607 83.766 104.986 1.00 34.32 O
ATOM 5 O5' C A 235 -6.335 84.454 104.184 1.00 16.21 O
ATOM 6 C5' C A 235 -5.892 85.166 105.353 1.00 14.96 C
ATOM 7 C4' C A 235 -4.459 84.828 105.682 1.00 15.37 C
ATOM 8 O4' C A 235 -4.257 83.399 105.532 1.00 15.51 O
ATOM 9 C3' C A 235 -3.361 85.457 104.841 1.00 13.66 C
ATOM 10 O3' C A 235 -3.046 86.763 105.334 1.00 14.56 O
ATOM 11 C2' C A 235 -2.201 84.490 105.075 1.00 14.60 C
ATOM 12 O2' C A 235 -1.540 84.694 106.306 1.00 14.21 O
ATOM 13 C1' C A 235 -2.914 83.143 105.176 1.00 15.90 C
ATOM 14 N1 C A 235 -2.868 82.417 103.897 1.00 4.78 N
ATOM 15 C2 C A 235 -1.653 81.858 103.494 1.00 4.45 C
ATOM 16 O2 C A 235 -0.680 81.959 104.237 1.00 1.49 O
ATOM 17 N3 C A 235 -1.568 81.233 102.302 1.00 4.81 N
ATOM 18 C4 C A 235 -2.649 81.149 101.518 1.00 3.45 C
ATOM 19 N4 C A 235 -2.526 80.528 100.346 1.00 3.74 N
ATOM 20 C5 C A 235 -3.908 81.698 101.905 1.00 3.32 C
ATOM 21 C6 C A 235 -3.974 82.311 103.096 1.00 2.74 C
ATOM 22 P A A 236 -2.461 87.891 104.344 1.00 40.63 P
ATOM 23 OP1 A A 236 -2.386 89.109 105.173 1.00 29.05 O
ATOM 24 OP2 A A 236 -3.204 87.915 103.056 1.00 27.71 O
ATOM 25 O5' A A 236 -0.970 87.454 104.037 1.00 25.31 O
TER
ATOM 1 O3' A B 272 7.396 76.943 102.944 1.00 25.90 O
ATOM 2 P C B 273 6.555 76.041 103.979 1.00 24.24 P
ATOM 3 OP1 C B 273 7.547 75.187 104.691 1.00 29.78 O
ATOM 4 OP2 C B 273 5.416 75.410 103.267 1.00 28.27 O
ATOM 5 O5' C B 273 5.944 77.083 105.017 1.00 19.72 O
ATOM 6 C5' C B 273 6.778 77.683 106.028 1.00 19.08 C
ATOM 7 C4' C B 273 6.002 78.703 106.830 1.00 18.21 C
ATOM 8 O4' C B 273 5.684 79.828 105.981 1.00 17.55 O
ATOM 9 C3' C B 273 4.662 78.255 107.387 1.00 18.48 C
ATOM 10 O3' C B 273 4.776 77.571 108.624 1.00 19.93 O
ATOM 11 C2' C B 273 3.915 79.568 107.549 1.00 18.79 C
ATOM 12 O2' C B 273 4.276 80.230 108.743 1.00 22.14 O
ATOM 13 C1' C B 273 4.425 80.357 106.346 1.00 17.28 C
ATOM 14 N1 C B 273 3.526 80.242 105.195 1.00 33.97 N
ATOM 15 C2 C B 273 2.347 80.987 105.189 1.00 33.86 C
ATOM 16 O2 C B 273 2.094 81.725 106.157 1.00 33.87 O
ATOM 17 N3 C B 273 1.506 80.882 104.132 1.00 35.51 N
ATOM 18 C4 C B 273 1.803 80.068 103.119 1.00 34.30 C
ATOM 19 N4 C B 273 0.937 79.991 102.108 1.00 32.88 N
ATOM 20 C5 C B 273 2.998 79.297 103.101 1.00 31.99 C
ATOM 21 C6 C B 273 3.825 79.416 104.147 1.00 32.55 C
ATOM 22 P G B 274 3.620 76.540 109.054 1.00 36.06 P
ATOM 23 OP1 G B 274 3.921 76.090 110.444 1.00 46.54 O
ATOM 24 OP2 G B 274 3.478 75.535 107.963 1.00 45.22 O
ATOM 25 O5' G B 274 2.288 77.419 109.072 1.00 28.37 O
TER
Atoms:
C2: (-1.653,81.858,103.494)
OP1: (-8.008,83.764,102.488)
OP2: (-8.607,83.766,104.986)
C4: (-2.649,81.149,101.518)
O5': (-6.335,84.454,104.184)
C3': (-3.361,85.457,104.841)
C1': (-2.914,83.143,105.176)
O4': (-4.257,83.399,105.532)
C5': (-5.892,85.166,105.353)
P: (-7.889,84.376,103.832)
O2: (-0.680,81.959,104.237)
C4': (-4.459,84.828,105.682)
C2': (-2.201,84.490,105.075)
O2': (-1.540,84.694,106.306)
N1: (-2.868,82.417,103.897)
N3: (-1.568,81.233,102.302)
N4: (-2.526,80.528,100.346)
C6: (-3.974,82.311,103.096)
C5: (-3.908,81.698,101.905)
O3': (-3.046,86.763,105.334)
OP1: (-8.008,83.764,102.488)
OP2: (-8.607,83.766,104.986)
C4: (-2.649,81.149,101.518)
O5': (-6.335,84.454,104.184)
C3': (-3.361,85.457,104.841)
C1': (-2.914,83.143,105.176)
O4': (-4.257,83.399,105.532)
C5': (-5.892,85.166,105.353)
P: (-7.889,84.376,103.832)
O2: (-0.680,81.959,104.237)
C4': (-4.459,84.828,105.682)
C2': (-2.201,84.490,105.075)
O2': (-1.540,84.694,106.306)
N1: (-2.868,82.417,103.897)
N3: (-1.568,81.233,102.302)
N4: (-2.526,80.528,100.346)
C6: (-3.974,82.311,103.096)
C5: (-3.908,81.698,101.905)
O3': (-3.046,86.763,105.334)
C2: (2.347,80.987,105.189)
OP1: (7.547,75.187,104.691)
OP2: (5.416,75.410,103.267)
C4: (1.803,80.068,103.119)
O5': (5.944,77.083,105.017)
C3': (4.662,78.255,107.387)
C1': (4.425,80.357,106.346)
O4': (5.684,79.828,105.981)
C5': (6.778,77.683,106.028)
P: (6.555,76.041,103.979)
O2: (2.094,81.725,106.157)
C4': (6.002,78.703,106.830)
C2': (3.915,79.568,107.549)
O2': (4.276,80.230,108.743)
N1: (3.526,80.242,105.195)
N3: (1.506,80.882,104.132)
N4: (0.937,79.991,102.108)
C6: (3.825,79.416,104.147)
C5: (2.998,79.297,103.101)
O3': (4.776,77.571,108.624)
OP1: (7.547,75.187,104.691)
OP2: (5.416,75.410,103.267)
C4: (1.803,80.068,103.119)
O5': (5.944,77.083,105.017)
C3': (4.662,78.255,107.387)
C1': (4.425,80.357,106.346)
O4': (5.684,79.828,105.981)
C5': (6.778,77.683,106.028)
P: (6.555,76.041,103.979)
O2: (2.094,81.725,106.157)
C4': (6.002,78.703,106.830)
C2': (3.915,79.568,107.549)
O2': (4.276,80.230,108.743)
N1: (3.526,80.242,105.195)
N3: (1.506,80.882,104.132)
N4: (0.937,79.991,102.108)
C6: (3.825,79.416,104.147)
C5: (2.998,79.297,103.101)
O3': (4.776,77.571,108.624)
Image (generated by PyMOL):