Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0427:0141
Extra
PDB:
ATOM 1 O3' C A 426 55.671 113.286 30.534 1.00 54.62 O
ATOM 2 P A A 427 54.875 114.294 31.503 1.00 55.58 P
ATOM 3 OP1 A A 427 54.157 113.455 32.491 1.00 56.04 O
ATOM 4 OP2 A A 427 54.109 115.267 30.677 1.00 53.14 O
ATOM 5 O5' A A 427 56.036 115.075 32.270 1.00 55.10 O
ATOM 6 C5' A A 427 56.949 114.376 33.151 1.00 53.00 C
ATOM 7 C4' A A 427 57.968 115.335 33.727 1.00 52.47 C
ATOM 8 O4' A A 427 58.926 115.729 32.707 1.00 53.93 O
ATOM 9 C3' A A 427 57.410 116.648 34.239 1.00 51.61 C
ATOM 10 O3' A A 427 56.861 116.526 35.537 1.00 51.06 O
ATOM 11 C2' A A 427 58.628 117.557 34.182 1.00 52.77 C
ATOM 12 O2' A A 427 59.536 117.338 35.240 1.00 53.24 O
ATOM 13 C1' A A 427 59.273 117.098 32.874 1.00 53.63 C
ATOM 14 N9 A A 427 58.739 117.843 31.733 1.00 55.63 N
ATOM 15 C8 A A 427 57.739 117.446 30.875 1.00 56.76 C
ATOM 16 N7 A A 427 57.440 118.338 29.963 1.00 57.22 N
ATOM 17 C5 A A 427 58.308 119.386 30.227 1.00 54.94 C
ATOM 18 C6 A A 427 58.498 120.617 29.606 1.00 54.13 C
ATOM 19 N6 A A 427 57.804 121.022 28.545 1.00 54.14 N
ATOM 20 N1 A A 427 59.442 121.432 30.110 1.00 54.25 N
ATOM 21 C2 A A 427 60.143 121.021 31.165 1.00 53.66 C
ATOM 22 N3 A A 427 60.063 119.883 31.834 1.00 54.16 N
ATOM 23 C4 A A 427 59.114 119.096 31.310 1.00 54.95 C
ATOM 24 P C A 428 55.657 117.494 35.980 1.00 52.53 P
ATOM 25 OP1 C A 428 55.288 117.135 37.374 1.00 51.62 O
ATOM 26 OP2 C A 428 54.619 117.487 34.917 1.00 54.46 O
ATOM 27 O5' C A 428 56.301 118.951 35.993 1.00 54.91 O
TER
ATOM 1 O3' A B 140 61.786 122.694 40.614 1.00 54.49 O
ATOM 2 P C B 141 62.996 121.762 40.145 1.00 54.13 P
ATOM 3 OP1 C B 141 63.027 120.583 41.038 1.00 53.45 O
ATOM 4 OP2 C B 141 64.206 122.608 40.000 1.00 53.85 O
ATOM 5 O5' C B 141 62.535 121.257 38.708 1.00 55.45 O
ATOM 6 C5' C B 141 61.345 120.453 38.551 1.00 55.05 C
ATOM 7 C4' C B 141 61.071 120.213 37.087 1.00 54.30 C
ATOM 8 O4' C B 141 60.751 121.478 36.455 1.00 54.51 O
ATOM 9 C3' C B 141 62.259 119.686 36.294 1.00 54.23 C
ATOM 10 O3' C B 141 62.409 118.272 36.380 1.00 52.39 O
ATOM 11 C2' C B 141 61.934 120.143 34.883 1.00 55.00 C
ATOM 12 O2' C B 141 60.979 119.308 34.267 1.00 55.88 O
ATOM 13 C1' C B 141 61.323 121.518 35.155 1.00 56.31 C
ATOM 14 N1 C B 141 62.316 122.615 35.109 1.00 58.72 N
ATOM 15 C2 C B 141 62.482 123.318 33.918 1.00 58.79 C
ATOM 16 O2 C B 141 61.817 122.988 32.927 1.00 59.67 O
ATOM 17 N3 C B 141 63.361 124.342 33.874 1.00 58.58 N
ATOM 18 C4 C B 141 64.059 124.671 34.956 1.00 57.64 C
ATOM 19 N4 C B 141 64.889 125.703 34.866 1.00 58.85 N
ATOM 20 C5 C B 141 63.931 123.960 36.177 1.00 57.70 C
ATOM 21 C6 C B 141 63.058 122.948 36.211 1.00 59.40 C
ATOM 22 P C B 142 63.883 117.635 36.430 1.00 51.05 P
ATOM 23 OP1 C B 142 63.792 116.153 36.356 1.00 50.71 O
ATOM 24 OP2 C B 142 64.572 118.271 37.579 1.00 50.70 O
ATOM 25 O5' C B 142 64.568 118.151 35.088 1.00 49.98 O
TER
ATOM 2 P A A 427 54.875 114.294 31.503 1.00 55.58 P
ATOM 3 OP1 A A 427 54.157 113.455 32.491 1.00 56.04 O
ATOM 4 OP2 A A 427 54.109 115.267 30.677 1.00 53.14 O
ATOM 5 O5' A A 427 56.036 115.075 32.270 1.00 55.10 O
ATOM 6 C5' A A 427 56.949 114.376 33.151 1.00 53.00 C
ATOM 7 C4' A A 427 57.968 115.335 33.727 1.00 52.47 C
ATOM 8 O4' A A 427 58.926 115.729 32.707 1.00 53.93 O
ATOM 9 C3' A A 427 57.410 116.648 34.239 1.00 51.61 C
ATOM 10 O3' A A 427 56.861 116.526 35.537 1.00 51.06 O
ATOM 11 C2' A A 427 58.628 117.557 34.182 1.00 52.77 C
ATOM 12 O2' A A 427 59.536 117.338 35.240 1.00 53.24 O
ATOM 13 C1' A A 427 59.273 117.098 32.874 1.00 53.63 C
ATOM 14 N9 A A 427 58.739 117.843 31.733 1.00 55.63 N
ATOM 15 C8 A A 427 57.739 117.446 30.875 1.00 56.76 C
ATOM 16 N7 A A 427 57.440 118.338 29.963 1.00 57.22 N
ATOM 17 C5 A A 427 58.308 119.386 30.227 1.00 54.94 C
ATOM 18 C6 A A 427 58.498 120.617 29.606 1.00 54.13 C
ATOM 19 N6 A A 427 57.804 121.022 28.545 1.00 54.14 N
ATOM 20 N1 A A 427 59.442 121.432 30.110 1.00 54.25 N
ATOM 21 C2 A A 427 60.143 121.021 31.165 1.00 53.66 C
ATOM 22 N3 A A 427 60.063 119.883 31.834 1.00 54.16 N
ATOM 23 C4 A A 427 59.114 119.096 31.310 1.00 54.95 C
ATOM 24 P C A 428 55.657 117.494 35.980 1.00 52.53 P
ATOM 25 OP1 C A 428 55.288 117.135 37.374 1.00 51.62 O
ATOM 26 OP2 C A 428 54.619 117.487 34.917 1.00 54.46 O
ATOM 27 O5' C A 428 56.301 118.951 35.993 1.00 54.91 O
TER
ATOM 1 O3' A B 140 61.786 122.694 40.614 1.00 54.49 O
ATOM 2 P C B 141 62.996 121.762 40.145 1.00 54.13 P
ATOM 3 OP1 C B 141 63.027 120.583 41.038 1.00 53.45 O
ATOM 4 OP2 C B 141 64.206 122.608 40.000 1.00 53.85 O
ATOM 5 O5' C B 141 62.535 121.257 38.708 1.00 55.45 O
ATOM 6 C5' C B 141 61.345 120.453 38.551 1.00 55.05 C
ATOM 7 C4' C B 141 61.071 120.213 37.087 1.00 54.30 C
ATOM 8 O4' C B 141 60.751 121.478 36.455 1.00 54.51 O
ATOM 9 C3' C B 141 62.259 119.686 36.294 1.00 54.23 C
ATOM 10 O3' C B 141 62.409 118.272 36.380 1.00 52.39 O
ATOM 11 C2' C B 141 61.934 120.143 34.883 1.00 55.00 C
ATOM 12 O2' C B 141 60.979 119.308 34.267 1.00 55.88 O
ATOM 13 C1' C B 141 61.323 121.518 35.155 1.00 56.31 C
ATOM 14 N1 C B 141 62.316 122.615 35.109 1.00 58.72 N
ATOM 15 C2 C B 141 62.482 123.318 33.918 1.00 58.79 C
ATOM 16 O2 C B 141 61.817 122.988 32.927 1.00 59.67 O
ATOM 17 N3 C B 141 63.361 124.342 33.874 1.00 58.58 N
ATOM 18 C4 C B 141 64.059 124.671 34.956 1.00 57.64 C
ATOM 19 N4 C B 141 64.889 125.703 34.866 1.00 58.85 N
ATOM 20 C5 C B 141 63.931 123.960 36.177 1.00 57.70 C
ATOM 21 C6 C B 141 63.058 122.948 36.211 1.00 59.40 C
ATOM 22 P C B 142 63.883 117.635 36.430 1.00 51.05 P
ATOM 23 OP1 C B 142 63.792 116.153 36.356 1.00 50.71 O
ATOM 24 OP2 C B 142 64.572 118.271 37.579 1.00 50.70 O
ATOM 25 O5' C B 142 64.568 118.151 35.088 1.00 49.98 O
TER
Atoms:
OP1: (54.157,113.455,32.491)
OP2: (54.109,115.267,30.677)
C3': (57.410,116.648,34.239)
C1': (59.273,117.098,32.874)
C5': (56.949,114.376,33.151)
O4': (58.926,115.729,32.707)
C8: (57.739,117.446,30.875)
O2': (59.536,117.338,35.240)
C6: (58.498,120.617,29.606)
C5: (58.308,119.386,30.227)
C4: (59.114,119.096,31.310)
P: (54.875,114.294,31.503)
C4': (57.968,115.335,33.727)
C2': (58.628,117.557,34.182)
C2: (60.143,121.021,31.165)
N1: (59.442,121.432,30.110)
N3: (60.063,119.883,31.834)
N6: (57.804,121.022,28.545)
N7: (57.440,118.338,29.963)
N9: (58.739,117.843,31.733)
O5': (56.036,115.075,32.270)
O3': (56.861,116.526,35.537)
OP2: (54.109,115.267,30.677)
C3': (57.410,116.648,34.239)
C1': (59.273,117.098,32.874)
C5': (56.949,114.376,33.151)
O4': (58.926,115.729,32.707)
C8: (57.739,117.446,30.875)
O2': (59.536,117.338,35.240)
C6: (58.498,120.617,29.606)
C5: (58.308,119.386,30.227)
C4: (59.114,119.096,31.310)
P: (54.875,114.294,31.503)
C4': (57.968,115.335,33.727)
C2': (58.628,117.557,34.182)
C2: (60.143,121.021,31.165)
N1: (59.442,121.432,30.110)
N3: (60.063,119.883,31.834)
N6: (57.804,121.022,28.545)
N7: (57.440,118.338,29.963)
N9: (58.739,117.843,31.733)
O5': (56.036,115.075,32.270)
O3': (56.861,116.526,35.537)
C2: (62.482,123.318,33.918)
OP1: (63.027,120.583,41.038)
OP2: (64.206,122.608,40.000)
C4: (64.059,124.671,34.956)
O5': (62.535,121.257,38.708)
C3': (62.259,119.686,36.294)
C1': (61.323,121.518,35.155)
O4': (60.751,121.478,36.455)
C5': (61.345,120.453,38.551)
P: (62.996,121.762,40.145)
O2: (61.817,122.988,32.927)
C4': (61.071,120.213,37.087)
C2': (61.934,120.143,34.883)
O2': (60.979,119.308,34.267)
N1: (62.316,122.615,35.109)
N3: (63.361,124.342,33.874)
N4: (64.889,125.703,34.866)
C6: (63.058,122.948,36.211)
C5: (63.931,123.960,36.177)
O3': (62.409,118.272,36.380)
OP1: (63.027,120.583,41.038)
OP2: (64.206,122.608,40.000)
C4: (64.059,124.671,34.956)
O5': (62.535,121.257,38.708)
C3': (62.259,119.686,36.294)
C1': (61.323,121.518,35.155)
O4': (60.751,121.478,36.455)
C5': (61.345,120.453,38.551)
P: (62.996,121.762,40.145)
O2: (61.817,122.988,32.927)
C4': (61.071,120.213,37.087)
C2': (61.934,120.143,34.883)
O2': (60.979,119.308,34.267)
N1: (62.316,122.615,35.109)
N3: (63.361,124.342,33.874)
N4: (64.889,125.703,34.866)
C6: (63.058,122.948,36.211)
C5: (63.931,123.960,36.177)
O3': (62.409,118.272,36.380)
Image (generated by PyMOL):