Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NYI:A5:B18
Extra
PDB:
ATOM 1 O3' U A 4 20.541 16.673 29.270 1.00 32.39 O
ATOM 2 P C A 5 20.628 16.259 27.738 1.00 33.35 P
ATOM 3 OP1 C A 5 20.344 17.538 27.065 1.00 36.16 O
ATOM 4 OP2 C A 5 19.714 15.138 27.455 1.00 34.08 O
ATOM 5 O5' C A 5 22.150 15.887 27.446 1.00 33.24 O
ATOM 6 C5' C A 5 23.046 16.977 27.431 1.00 34.52 C
ATOM 7 C4' C A 5 24.489 16.575 27.251 1.00 35.48 C
ATOM 8 O4' C A 5 24.969 15.980 28.479 1.00 35.73 O
ATOM 9 C3' C A 5 24.692 15.547 26.164 1.00 37.26 C
ATOM 10 O3' C A 5 24.950 16.175 24.920 1.00 36.46 O
ATOM 11 C2' C A 5 25.921 14.827 26.690 1.00 39.01 C
ATOM 12 O2' C A 5 27.104 15.542 26.437 1.00 42.83 O
ATOM 13 C1' C A 5 25.655 14.786 28.184 1.00 38.40 C
ATOM 14 N1 C A 5 24.884 13.545 28.511 1.00 39.11 N
ATOM 15 C2 C A 5 25.603 12.352 28.695 1.00 39.17 C
ATOM 16 O2 C A 5 26.837 12.408 28.592 1.00 39.04 O
ATOM 17 N3 C A 5 24.928 11.194 28.971 1.00 38.60 N
ATOM 18 C4 C A 5 23.593 11.216 29.054 1.00 38.80 C
ATOM 19 N4 C A 5 22.943 10.090 29.324 1.00 37.85 N
ATOM 20 C5 C A 5 22.839 12.419 28.866 1.00 40.26 C
ATOM 21 C6 C A 5 23.516 13.541 28.590 1.00 39.89 C
ATOM 22 P U A 6 24.575 15.408 23.567 1.00 36.73 P
ATOM 23 OP1 U A 6 24.770 16.318 22.409 1.00 37.15 O
ATOM 24 OP2 U A 6 23.272 14.712 23.738 1.00 35.23 O
ATOM 25 O5' U A 6 25.763 14.347 23.485 1.00 37.88 O
TER
ATOM 1 O3' U B 17 34.284 4.219 28.038 1.00 49.36 O
ATOM 2 P C B 18 33.754 4.802 29.439 1.00 47.81 P
ATOM 3 OP1 C B 18 34.848 4.699 30.423 1.00 47.77 O
ATOM 4 OP2 C B 18 32.372 4.368 29.746 1.00 47.30 O
ATOM 5 O5' C B 18 33.571 6.331 29.062 1.00 47.82 O
ATOM 6 C5' C B 18 33.345 6.658 27.715 1.00 48.02 C
ATOM 7 C4' C B 18 33.660 8.115 27.486 1.00 48.31 C
ATOM 8 O4' C B 18 32.588 8.640 26.665 1.00 49.24 O
ATOM 9 C3' C B 18 33.674 8.945 28.760 1.00 48.42 C
ATOM 10 O3' C B 18 35.010 9.153 29.180 1.00 46.73 O
ATOM 11 C2' C B 18 33.036 10.244 28.299 1.00 49.15 C
ATOM 12 O2' C B 18 34.006 11.029 27.639 1.00 51.24 O
ATOM 13 C1' C B 18 31.997 9.764 27.299 1.00 48.76 C
ATOM 14 N1 C B 18 30.651 9.440 27.903 1.00 47.55 N
ATOM 15 C2 C B 18 29.722 10.468 27.980 1.00 47.01 C
ATOM 16 O2 C B 18 30.052 11.560 27.552 1.00 48.91 O
ATOM 17 N3 C B 18 28.495 10.251 28.501 1.00 46.69 N
ATOM 18 C4 C B 18 28.177 9.041 28.951 1.00 47.37 C
ATOM 19 N4 C B 18 26.952 8.880 29.457 1.00 47.06 N
ATOM 20 C5 C B 18 29.104 7.946 28.886 1.00 47.58 C
ATOM 21 C6 C B 18 30.316 8.192 28.366 1.00 47.45 C
ATOM 22 P A B 19 35.301 9.610 30.687 1.00 47.19 P
ATOM 23 OP1 A B 19 36.751 9.923 30.783 1.00 45.56 O
ATOM 24 OP2 A B 19 34.565 8.761 31.668 1.00 43.08 O
ATOM 25 O5' A B 19 34.544 11.013 30.705 1.00 47.78 O
TER
ATOM 2 P C A 5 20.628 16.259 27.738 1.00 33.35 P
ATOM 3 OP1 C A 5 20.344 17.538 27.065 1.00 36.16 O
ATOM 4 OP2 C A 5 19.714 15.138 27.455 1.00 34.08 O
ATOM 5 O5' C A 5 22.150 15.887 27.446 1.00 33.24 O
ATOM 6 C5' C A 5 23.046 16.977 27.431 1.00 34.52 C
ATOM 7 C4' C A 5 24.489 16.575 27.251 1.00 35.48 C
ATOM 8 O4' C A 5 24.969 15.980 28.479 1.00 35.73 O
ATOM 9 C3' C A 5 24.692 15.547 26.164 1.00 37.26 C
ATOM 10 O3' C A 5 24.950 16.175 24.920 1.00 36.46 O
ATOM 11 C2' C A 5 25.921 14.827 26.690 1.00 39.01 C
ATOM 12 O2' C A 5 27.104 15.542 26.437 1.00 42.83 O
ATOM 13 C1' C A 5 25.655 14.786 28.184 1.00 38.40 C
ATOM 14 N1 C A 5 24.884 13.545 28.511 1.00 39.11 N
ATOM 15 C2 C A 5 25.603 12.352 28.695 1.00 39.17 C
ATOM 16 O2 C A 5 26.837 12.408 28.592 1.00 39.04 O
ATOM 17 N3 C A 5 24.928 11.194 28.971 1.00 38.60 N
ATOM 18 C4 C A 5 23.593 11.216 29.054 1.00 38.80 C
ATOM 19 N4 C A 5 22.943 10.090 29.324 1.00 37.85 N
ATOM 20 C5 C A 5 22.839 12.419 28.866 1.00 40.26 C
ATOM 21 C6 C A 5 23.516 13.541 28.590 1.00 39.89 C
ATOM 22 P U A 6 24.575 15.408 23.567 1.00 36.73 P
ATOM 23 OP1 U A 6 24.770 16.318 22.409 1.00 37.15 O
ATOM 24 OP2 U A 6 23.272 14.712 23.738 1.00 35.23 O
ATOM 25 O5' U A 6 25.763 14.347 23.485 1.00 37.88 O
TER
ATOM 1 O3' U B 17 34.284 4.219 28.038 1.00 49.36 O
ATOM 2 P C B 18 33.754 4.802 29.439 1.00 47.81 P
ATOM 3 OP1 C B 18 34.848 4.699 30.423 1.00 47.77 O
ATOM 4 OP2 C B 18 32.372 4.368 29.746 1.00 47.30 O
ATOM 5 O5' C B 18 33.571 6.331 29.062 1.00 47.82 O
ATOM 6 C5' C B 18 33.345 6.658 27.715 1.00 48.02 C
ATOM 7 C4' C B 18 33.660 8.115 27.486 1.00 48.31 C
ATOM 8 O4' C B 18 32.588 8.640 26.665 1.00 49.24 O
ATOM 9 C3' C B 18 33.674 8.945 28.760 1.00 48.42 C
ATOM 10 O3' C B 18 35.010 9.153 29.180 1.00 46.73 O
ATOM 11 C2' C B 18 33.036 10.244 28.299 1.00 49.15 C
ATOM 12 O2' C B 18 34.006 11.029 27.639 1.00 51.24 O
ATOM 13 C1' C B 18 31.997 9.764 27.299 1.00 48.76 C
ATOM 14 N1 C B 18 30.651 9.440 27.903 1.00 47.55 N
ATOM 15 C2 C B 18 29.722 10.468 27.980 1.00 47.01 C
ATOM 16 O2 C B 18 30.052 11.560 27.552 1.00 48.91 O
ATOM 17 N3 C B 18 28.495 10.251 28.501 1.00 46.69 N
ATOM 18 C4 C B 18 28.177 9.041 28.951 1.00 47.37 C
ATOM 19 N4 C B 18 26.952 8.880 29.457 1.00 47.06 N
ATOM 20 C5 C B 18 29.104 7.946 28.886 1.00 47.58 C
ATOM 21 C6 C B 18 30.316 8.192 28.366 1.00 47.45 C
ATOM 22 P A B 19 35.301 9.610 30.687 1.00 47.19 P
ATOM 23 OP1 A B 19 36.751 9.923 30.783 1.00 45.56 O
ATOM 24 OP2 A B 19 34.565 8.761 31.668 1.00 43.08 O
ATOM 25 O5' A B 19 34.544 11.013 30.705 1.00 47.78 O
TER
Atoms:
C2: (25.603,12.352,28.695)
OP1: (20.344,17.538,27.065)
OP2: (19.714,15.138,27.455)
C4: (23.593,11.216,29.054)
O5': (22.150,15.887,27.446)
C3': (24.692,15.547,26.164)
C1': (25.655,14.786,28.184)
O4': (24.969,15.980,28.479)
C5': (23.046,16.977,27.431)
P: (20.628,16.259,27.738)
O2: (26.837,12.408,28.592)
C4': (24.489,16.575,27.251)
C2': (25.921,14.827,26.690)
O2': (27.104,15.542,26.437)
N1: (24.884,13.545,28.511)
N3: (24.928,11.194,28.971)
N4: (22.943,10.090,29.324)
C6: (23.516,13.541,28.590)
C5: (22.839,12.419,28.866)
O3': (24.950,16.175,24.920)
OP1: (20.344,17.538,27.065)
OP2: (19.714,15.138,27.455)
C4: (23.593,11.216,29.054)
O5': (22.150,15.887,27.446)
C3': (24.692,15.547,26.164)
C1': (25.655,14.786,28.184)
O4': (24.969,15.980,28.479)
C5': (23.046,16.977,27.431)
P: (20.628,16.259,27.738)
O2: (26.837,12.408,28.592)
C4': (24.489,16.575,27.251)
C2': (25.921,14.827,26.690)
O2': (27.104,15.542,26.437)
N1: (24.884,13.545,28.511)
N3: (24.928,11.194,28.971)
N4: (22.943,10.090,29.324)
C6: (23.516,13.541,28.590)
C5: (22.839,12.419,28.866)
O3': (24.950,16.175,24.920)
C2: (29.722,10.468,27.980)
OP1: (34.848,4.699,30.423)
OP2: (32.372,4.368,29.746)
C4: (28.177,9.041,28.951)
O5': (33.571,6.331,29.062)
C3': (33.674,8.945,28.760)
C1': (31.997,9.764,27.299)
O4': (32.588,8.640,26.665)
C5': (33.345,6.658,27.715)
P: (33.754,4.802,29.439)
O2: (30.052,11.560,27.552)
C4': (33.660,8.115,27.486)
C2': (33.036,10.244,28.299)
O2': (34.006,11.029,27.639)
N1: (30.651,9.440,27.903)
N3: (28.495,10.251,28.501)
N4: (26.952,8.880,29.457)
C6: (30.316,8.192,28.366)
C5: (29.104,7.946,28.886)
O3': (35.010,9.153,29.180)
OP1: (34.848,4.699,30.423)
OP2: (32.372,4.368,29.746)
C4: (28.177,9.041,28.951)
O5': (33.571,6.331,29.062)
C3': (33.674,8.945,28.760)
C1': (31.997,9.764,27.299)
O4': (32.588,8.640,26.665)
C5': (33.345,6.658,27.715)
P: (33.754,4.802,29.439)
O2: (30.052,11.560,27.552)
C4': (33.660,8.115,27.486)
C2': (33.036,10.244,28.299)
O2': (34.006,11.029,27.639)
N1: (30.651,9.440,27.903)
N3: (28.495,10.251,28.501)
N4: (26.952,8.880,29.457)
C6: (30.316,8.192,28.366)
C5: (29.104,7.946,28.886)
O3': (35.010,9.153,29.180)
Image (generated by PyMOL):