Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1308:A701
Extra
PDB:
ATOM 1 O3' U A1307 30.543 -26.269 -40.368 1.00 51.32 O
ATOM 2 P A A1308 32.087 -26.628 -40.171 1.00 51.98 P
ATOM 3 OP1 A A1308 32.905 -25.442 -40.525 1.00 48.71 O
ATOM 4 OP2 A A1308 32.280 -27.906 -40.887 1.00 36.89 O
ATOM 5 O5' A A1308 32.241 -26.926 -38.614 1.00 39.51 O
ATOM 6 C5' A A1308 32.160 -25.880 -37.638 1.00 47.87 C
ATOM 7 C4' A A1308 32.961 -26.241 -36.391 1.00 55.12 C
ATOM 8 O4' A A1308 32.270 -27.226 -35.571 1.00 52.50 O
ATOM 9 C3' A A1308 34.324 -26.869 -36.633 1.00 50.53 C
ATOM 10 O3' A A1308 35.302 -25.898 -36.946 1.00 44.86 O
ATOM 11 C2' A A1308 34.613 -27.594 -35.327 1.00 49.85 C
ATOM 12 O2' A A1308 35.110 -26.690 -34.356 1.00 50.42 O
ATOM 13 C1' A A1308 33.216 -28.070 -34.925 1.00 46.89 C
ATOM 14 N9 A A1308 32.921 -29.465 -35.278 1.00 46.22 N
ATOM 15 C8 A A1308 32.169 -29.929 -36.332 1.00 46.67 C
ATOM 16 N7 A A1308 32.060 -31.237 -36.372 1.00 48.71 N
ATOM 17 C5 A A1308 32.794 -31.665 -35.275 1.00 48.92 C
ATOM 18 C6 A A1308 33.069 -32.949 -34.764 1.00 49.77 C
ATOM 19 N6 A A1308 32.600 -34.074 -35.306 1.00 54.65 N
ATOM 20 N1 A A1308 33.847 -33.034 -33.662 1.00 48.55 N
ATOM 21 C2 A A1308 34.307 -31.903 -33.117 1.00 52.16 C
ATOM 22 N3 A A1308 34.112 -30.639 -33.498 1.00 53.90 N
ATOM 23 C4 A A1308 33.336 -30.587 -34.596 1.00 52.28 C
ATOM 24 P A A1309 36.207 -26.116 -38.240 1.00 50.68 P
ATOM 25 OP1 A A1309 36.202 -24.882 -39.069 1.00 45.21 O
ATOM 26 OP2 A A1309 35.719 -27.379 -38.821 1.00 55.24 O
ATOM 27 O5' A A1309 37.667 -26.442 -37.674 1.00 53.58 O
TER
ATOM 1 O3' C B 700 41.331 -25.030 -30.862 1.00 35.71 O
ATOM 2 P C B 701 39.989 -24.945 -29.996 1.00 46.56 P
ATOM 3 OP1 C B 701 39.328 -23.640 -30.252 1.00 37.89 O
ATOM 4 OP2 C B 701 40.351 -25.334 -28.603 1.00 43.23 O
ATOM 5 O5' C B 701 39.100 -26.128 -30.589 1.00 44.68 O
ATOM 6 C5' C B 701 38.566 -26.058 -31.904 1.00 47.30 C
ATOM 7 C4' C B 701 37.432 -27.038 -32.040 1.00 46.79 C
ATOM 8 O4' C B 701 37.965 -28.386 -32.092 1.00 48.35 O
ATOM 9 C3' C B 701 36.469 -27.037 -30.864 1.00 40.98 C
ATOM 10 O3' C B 701 35.444 -26.057 -30.991 1.00 37.78 O
ATOM 11 C2' C B 701 35.924 -28.456 -30.886 1.00 45.87 C
ATOM 12 O2' C B 701 34.882 -28.641 -31.812 1.00 51.11 O
ATOM 13 C1' C B 701 37.137 -29.255 -31.343 1.00 45.75 C
ATOM 14 N1 C B 701 37.894 -29.711 -30.174 1.00 44.05 N
ATOM 15 C2 C B 701 37.439 -30.812 -29.477 1.00 45.65 C
ATOM 16 O2 C B 701 36.443 -31.402 -29.890 1.00 49.56 O
ATOM 17 N3 C B 701 38.103 -31.213 -28.370 1.00 46.34 N
ATOM 18 C4 C B 701 39.199 -30.557 -27.973 1.00 46.44 C
ATOM 19 N4 C B 701 39.827 -30.971 -26.873 1.00 48.69 N
ATOM 20 C5 C B 701 39.700 -29.440 -28.685 1.00 48.66 C
ATOM 21 C6 C B 701 39.021 -29.051 -29.766 1.00 47.16 C
ATOM 22 P U B 702 34.589 -25.623 -29.695 1.00 38.68 P
ATOM 23 OP1 U B 702 33.499 -24.728 -30.140 1.00 42.44 O
ATOM 24 OP2 U B 702 35.548 -25.147 -28.673 1.00 50.35 O
ATOM 25 O5' U B 702 33.938 -26.974 -29.158 1.00 36.29 O
TER
ATOM 2 P A A1308 32.087 -26.628 -40.171 1.00 51.98 P
ATOM 3 OP1 A A1308 32.905 -25.442 -40.525 1.00 48.71 O
ATOM 4 OP2 A A1308 32.280 -27.906 -40.887 1.00 36.89 O
ATOM 5 O5' A A1308 32.241 -26.926 -38.614 1.00 39.51 O
ATOM 6 C5' A A1308 32.160 -25.880 -37.638 1.00 47.87 C
ATOM 7 C4' A A1308 32.961 -26.241 -36.391 1.00 55.12 C
ATOM 8 O4' A A1308 32.270 -27.226 -35.571 1.00 52.50 O
ATOM 9 C3' A A1308 34.324 -26.869 -36.633 1.00 50.53 C
ATOM 10 O3' A A1308 35.302 -25.898 -36.946 1.00 44.86 O
ATOM 11 C2' A A1308 34.613 -27.594 -35.327 1.00 49.85 C
ATOM 12 O2' A A1308 35.110 -26.690 -34.356 1.00 50.42 O
ATOM 13 C1' A A1308 33.216 -28.070 -34.925 1.00 46.89 C
ATOM 14 N9 A A1308 32.921 -29.465 -35.278 1.00 46.22 N
ATOM 15 C8 A A1308 32.169 -29.929 -36.332 1.00 46.67 C
ATOM 16 N7 A A1308 32.060 -31.237 -36.372 1.00 48.71 N
ATOM 17 C5 A A1308 32.794 -31.665 -35.275 1.00 48.92 C
ATOM 18 C6 A A1308 33.069 -32.949 -34.764 1.00 49.77 C
ATOM 19 N6 A A1308 32.600 -34.074 -35.306 1.00 54.65 N
ATOM 20 N1 A A1308 33.847 -33.034 -33.662 1.00 48.55 N
ATOM 21 C2 A A1308 34.307 -31.903 -33.117 1.00 52.16 C
ATOM 22 N3 A A1308 34.112 -30.639 -33.498 1.00 53.90 N
ATOM 23 C4 A A1308 33.336 -30.587 -34.596 1.00 52.28 C
ATOM 24 P A A1309 36.207 -26.116 -38.240 1.00 50.68 P
ATOM 25 OP1 A A1309 36.202 -24.882 -39.069 1.00 45.21 O
ATOM 26 OP2 A A1309 35.719 -27.379 -38.821 1.00 55.24 O
ATOM 27 O5' A A1309 37.667 -26.442 -37.674 1.00 53.58 O
TER
ATOM 1 O3' C B 700 41.331 -25.030 -30.862 1.00 35.71 O
ATOM 2 P C B 701 39.989 -24.945 -29.996 1.00 46.56 P
ATOM 3 OP1 C B 701 39.328 -23.640 -30.252 1.00 37.89 O
ATOM 4 OP2 C B 701 40.351 -25.334 -28.603 1.00 43.23 O
ATOM 5 O5' C B 701 39.100 -26.128 -30.589 1.00 44.68 O
ATOM 6 C5' C B 701 38.566 -26.058 -31.904 1.00 47.30 C
ATOM 7 C4' C B 701 37.432 -27.038 -32.040 1.00 46.79 C
ATOM 8 O4' C B 701 37.965 -28.386 -32.092 1.00 48.35 O
ATOM 9 C3' C B 701 36.469 -27.037 -30.864 1.00 40.98 C
ATOM 10 O3' C B 701 35.444 -26.057 -30.991 1.00 37.78 O
ATOM 11 C2' C B 701 35.924 -28.456 -30.886 1.00 45.87 C
ATOM 12 O2' C B 701 34.882 -28.641 -31.812 1.00 51.11 O
ATOM 13 C1' C B 701 37.137 -29.255 -31.343 1.00 45.75 C
ATOM 14 N1 C B 701 37.894 -29.711 -30.174 1.00 44.05 N
ATOM 15 C2 C B 701 37.439 -30.812 -29.477 1.00 45.65 C
ATOM 16 O2 C B 701 36.443 -31.402 -29.890 1.00 49.56 O
ATOM 17 N3 C B 701 38.103 -31.213 -28.370 1.00 46.34 N
ATOM 18 C4 C B 701 39.199 -30.557 -27.973 1.00 46.44 C
ATOM 19 N4 C B 701 39.827 -30.971 -26.873 1.00 48.69 N
ATOM 20 C5 C B 701 39.700 -29.440 -28.685 1.00 48.66 C
ATOM 21 C6 C B 701 39.021 -29.051 -29.766 1.00 47.16 C
ATOM 22 P U B 702 34.589 -25.623 -29.695 1.00 38.68 P
ATOM 23 OP1 U B 702 33.499 -24.728 -30.140 1.00 42.44 O
ATOM 24 OP2 U B 702 35.548 -25.147 -28.673 1.00 50.35 O
ATOM 25 O5' U B 702 33.938 -26.974 -29.158 1.00 36.29 O
TER
Atoms:
OP1: (32.905,-25.442,-40.525)
OP2: (32.280,-27.906,-40.887)
C3': (34.324,-26.869,-36.633)
C1': (33.216,-28.070,-34.925)
C5': (32.160,-25.880,-37.638)
O4': (32.270,-27.226,-35.571)
C8: (32.169,-29.929,-36.332)
O2': (35.110,-26.690,-34.356)
C6: (33.069,-32.949,-34.764)
C5: (32.794,-31.665,-35.275)
C4: (33.336,-30.587,-34.596)
P: (32.087,-26.628,-40.171)
C4': (32.961,-26.241,-36.391)
C2': (34.613,-27.594,-35.327)
C2: (34.307,-31.903,-33.117)
N1: (33.847,-33.034,-33.662)
N3: (34.112,-30.639,-33.498)
N6: (32.600,-34.074,-35.306)
N7: (32.060,-31.237,-36.372)
N9: (32.921,-29.465,-35.278)
O5': (32.241,-26.926,-38.614)
O3': (35.302,-25.898,-36.946)
OP2: (32.280,-27.906,-40.887)
C3': (34.324,-26.869,-36.633)
C1': (33.216,-28.070,-34.925)
C5': (32.160,-25.880,-37.638)
O4': (32.270,-27.226,-35.571)
C8: (32.169,-29.929,-36.332)
O2': (35.110,-26.690,-34.356)
C6: (33.069,-32.949,-34.764)
C5: (32.794,-31.665,-35.275)
C4: (33.336,-30.587,-34.596)
P: (32.087,-26.628,-40.171)
C4': (32.961,-26.241,-36.391)
C2': (34.613,-27.594,-35.327)
C2: (34.307,-31.903,-33.117)
N1: (33.847,-33.034,-33.662)
N3: (34.112,-30.639,-33.498)
N6: (32.600,-34.074,-35.306)
N7: (32.060,-31.237,-36.372)
N9: (32.921,-29.465,-35.278)
O5': (32.241,-26.926,-38.614)
O3': (35.302,-25.898,-36.946)
C2: (37.439,-30.812,-29.477)
OP1: (39.328,-23.640,-30.252)
OP2: (40.351,-25.334,-28.603)
C4: (39.199,-30.557,-27.973)
O5': (39.100,-26.128,-30.589)
C3': (36.469,-27.037,-30.864)
C1': (37.137,-29.255,-31.343)
O4': (37.965,-28.386,-32.092)
C5': (38.566,-26.058,-31.904)
P: (39.989,-24.945,-29.996)
O2: (36.443,-31.402,-29.890)
C4': (37.432,-27.038,-32.040)
C2': (35.924,-28.456,-30.886)
O2': (34.882,-28.641,-31.812)
N1: (37.894,-29.711,-30.174)
N3: (38.103,-31.213,-28.370)
N4: (39.827,-30.971,-26.873)
C6: (39.021,-29.051,-29.766)
C5: (39.700,-29.440,-28.685)
O3': (35.444,-26.057,-30.991)
OP1: (39.328,-23.640,-30.252)
OP2: (40.351,-25.334,-28.603)
C4: (39.199,-30.557,-27.973)
O5': (39.100,-26.128,-30.589)
C3': (36.469,-27.037,-30.864)
C1': (37.137,-29.255,-31.343)
O4': (37.965,-28.386,-32.092)
C5': (38.566,-26.058,-31.904)
P: (39.989,-24.945,-29.996)
O2: (36.443,-31.402,-29.890)
C4': (37.432,-27.038,-32.040)
C2': (35.924,-28.456,-30.886)
O2': (34.882,-28.641,-31.812)
N1: (37.894,-29.711,-30.174)
N3: (38.103,-31.213,-28.370)
N4: (39.827,-30.971,-26.873)
C6: (39.021,-29.051,-29.766)
C5: (39.700,-29.440,-28.685)
O3': (35.444,-26.057,-30.991)
Image (generated by PyMOL):