ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:0279:0349

Extra

PDB:
ATOM 1 O3' C A 278 61.538 128.502 -1.706 1.00 78.48 O
ATOM 2 P C A 279 60.417 128.986 -0.666 1.00 78.20 P
ATOM 3 OP1 C A 279 60.179 130.427 -0.918 1.00 78.81 O
ATOM 4 OP2 C A 279 60.831 128.538 0.686 1.00 78.62 O
ATOM 5 O5' C A 279 59.109 128.181 -1.093 1.00 77.14 O
ATOM 6 C5' C A 279 58.441 128.467 -2.334 1.00 77.12 C
ATOM 7 C4' C A 279 57.201 127.617 -2.476 1.00 77.62 C
ATOM 8 O4' C A 279 57.564 126.213 -2.423 1.00 78.36 O
ATOM 9 C3' C A 279 56.150 127.760 -1.387 1.00 77.29 C
ATOM 10 O3' C A 279 55.310 128.884 -1.623 1.00 76.35 O
ATOM 11 C2' C A 279 55.371 126.455 -1.517 1.00 77.62 C
ATOM 12 O2' C A 279 54.421 126.473 -2.565 1.00 77.19 O
ATOM 13 C1' C A 279 56.484 125.468 -1.877 1.00 77.97 C
ATOM 14 N1 C A 279 56.972 124.661 -0.743 1.00 77.87 N
ATOM 15 C2 C A 279 56.192 123.582 -0.301 1.00 77.20 C
ATOM 16 O2 C A 279 55.095 123.367 -0.842 1.00 76.45 O
ATOM 17 N3 C A 279 56.650 122.807 0.710 1.00 77.86 N
ATOM 18 C4 C A 279 57.823 123.082 1.287 1.00 77.68 C
ATOM 19 N4 C A 279 58.239 122.282 2.275 1.00 77.59 N
ATOM 20 C5 C A 279 58.623 124.187 0.875 1.00 77.64 C
ATOM 21 C6 C A 279 58.165 124.942 -0.134 1.00 78.06 C
ATOM 22 P G A 280 54.672 129.680 -0.383 1.00 76.15 P
ATOM 23 OP1 G A 280 53.666 130.629 -0.920 1.00 76.54 O
ATOM 24 OP2 G A 280 55.796 130.189 0.443 1.00 76.54 O
ATOM 25 O5' G A 280 53.877 128.570 0.437 1.00 75.51 O
TER

ATOM 1 O3' A B 348 53.944 113.922 5.128 1.00 79.78 O
ATOM 2 P C B 349 54.641 113.581 3.725 1.00 81.62 P
ATOM 3 OP1 C B 349 54.709 112.100 3.616 1.00 80.96 O
ATOM 4 OP2 C B 349 55.883 114.384 3.619 1.00 82.33 O
ATOM 5 O5' C B 349 53.616 114.144 2.644 1.00 82.47 O
ATOM 6 C5' C B 349 52.308 113.570 2.493 1.00 84.37 C
ATOM 7 C4' C B 349 51.487 114.399 1.537 1.00 86.26 C
ATOM 8 O4' C B 349 51.275 115.717 2.108 1.00 86.65 O
ATOM 9 C3' C B 349 52.130 114.683 0.188 1.00 87.72 C
ATOM 10 O3' C B 349 51.979 113.595 -0.723 1.00 90.31 O
ATOM 11 C2' C B 349 51.387 115.937 -0.255 1.00 87.15 C
ATOM 12 O2' C B 349 50.090 115.660 -0.749 1.00 86.41 O
ATOM 13 C1' C B 349 51.264 116.690 1.072 1.00 86.70 C
ATOM 14 N1 C B 349 52.371 117.642 1.308 1.00 86.44 N
ATOM 15 C2 C B 349 52.268 118.950 0.793 1.00 85.35 C
ATOM 16 O2 C B 349 51.244 119.279 0.170 1.00 83.86 O
ATOM 17 N3 C B 349 53.289 119.818 0.990 1.00 84.76 N
ATOM 18 C4 C B 349 54.374 119.432 1.671 1.00 85.42 C
ATOM 19 N4 C B 349 55.360 120.318 1.834 1.00 84.92 N
ATOM 20 C5 C B 349 54.498 118.117 2.213 1.00 85.81 C
ATOM 21 C6 C B 349 53.485 117.265 2.010 1.00 86.40 C
ATOM 22 P G B 350 53.154 113.260 -1.774 1.00 92.17 P
ATOM 23 OP1 G B 350 52.686 112.111 -2.595 1.00 91.78 O
ATOM 24 OP2 G B 350 54.447 113.156 -1.042 1.00 90.68 O
ATOM 25 O5' G B 350 53.217 114.553 -2.707 1.00 91.80 O
TER

Atoms:
C2: (56.192,123.582,-0.301)
OP1: (60.179,130.427,-0.918)
OP2: (60.831,128.538,0.686)
C4: (57.823,123.082,1.287)
O5': (59.109,128.181,-1.093)
C3': (56.150,127.760,-1.387)
C1': (56.484,125.468,-1.877)
O4': (57.564,126.213,-2.423)
C5': (58.441,128.467,-2.334)
P: (60.417,128.986,-0.666)
O2: (55.095,123.367,-0.842)
C4': (57.201,127.617,-2.476)
C2': (55.371,126.455,-1.517)
O2': (54.421,126.473,-2.565)
N1: (56.972,124.661,-0.743)
N3: (56.650,122.807,0.710)
N4: (58.239,122.282,2.275)
C6: (58.165,124.942,-0.134)
C5: (58.623,124.187,0.875)
O3': (55.310,128.884,-1.623)
C2: (52.268,118.950,0.793)
OP1: (54.709,112.100,3.616)
OP2: (55.883,114.384,3.619)
C4: (54.374,119.432,1.671)
O5': (53.616,114.144,2.644)
C3': (52.130,114.683,0.188)
C1': (51.264,116.690,1.072)
O4': (51.275,115.717,2.108)
C5': (52.308,113.570,2.493)
P: (54.641,113.581,3.725)
O2: (51.244,119.279,0.170)
C4': (51.487,114.399,1.537)
C2': (51.387,115.937,-0.255)
O2': (50.090,115.660,-0.749)
N1: (52.371,117.642,1.308)
N3: (53.289,119.818,0.990)
N4: (55.360,120.318,1.834)
C6: (53.485,117.265,2.010)
C5: (54.498,118.117,2.213)
O3': (51.979,113.595,-0.723)
Image (generated by PyMOL):
PyMOL image
show in jmol