Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E9:E24
Extra
PDB:
ATOM 1 O3' A A 8 0.874 33.502 113.564 1.00 82.90 O
ATOM 2 P A A 9 -0.715 33.321 113.498 1.00 98.62 P
ATOM 3 OP1 A A 9 -1.321 34.580 112.991 1.00104.28 O
ATOM 4 OP2 A A 9 -1.133 32.781 114.823 1.00 67.10 O
ATOM 5 O5' A A 9 -0.916 32.193 112.394 1.00 84.86 O
ATOM 6 C5' A A 9 -0.386 32.358 111.083 1.00 89.86 C
ATOM 7 C4' A A 9 -0.388 31.035 110.354 1.00101.53 C
ATOM 8 O4' A A 9 0.568 30.133 110.977 1.00102.43 O
ATOM 9 C3' A A 9 -1.709 30.285 110.402 1.00103.54 C
ATOM 10 O3' A A 9 -2.576 30.737 109.365 1.00105.53 O
ATOM 11 C2' A A 9 -1.258 28.845 110.184 1.00 98.35 C
ATOM 12 O2' A A 9 -0.981 28.580 108.826 1.00118.22 O
ATOM 13 C1' A A 9 0.051 28.812 110.978 1.00 87.28 C
ATOM 14 N9 A A 9 -0.129 28.394 112.369 1.00 84.30 N
ATOM 15 C8 A A 9 -0.222 29.201 113.476 1.00 84.07 C
ATOM 16 N7 A A 9 -0.404 28.544 114.596 1.00 83.21 N
ATOM 17 C5 A A 9 -0.424 27.214 114.203 1.00 79.00 C
ATOM 18 C6 A A 9 -0.582 26.022 114.923 1.00 80.83 C
ATOM 19 N6 A A 9 -0.754 25.976 116.243 1.00 79.30 N
ATOM 20 N1 A A 9 -0.557 24.861 114.232 1.00 79.53 N
ATOM 21 C2 A A 9 -0.384 24.911 112.909 1.00 71.53 C
ATOM 22 N3 A A 9 -0.223 25.970 112.118 1.00 78.20 N
ATOM 23 C4 A A 9 -0.252 27.105 112.835 1.00 78.09 C
ATOM 24 P G A 10 -4.128 31.027 109.686 1.00109.75 P
ATOM 25 OP1 G A 10 -4.703 31.714 108.501 1.00113.57 O
ATOM 26 OP2 G A 10 -4.222 31.665 111.025 1.00 98.53 O
ATOM 27 O5' G A 10 -4.787 29.582 109.792 1.00106.10 O
TER
ATOM 1 O3' A B 23 -5.569 23.213 104.761 1.00 77.97 O
ATOM 2 P C B 24 -4.128 23.420 104.083 1.00 82.68 P
ATOM 3 OP1 C B 24 -4.218 24.474 103.042 1.00 82.27 O
ATOM 4 OP2 C B 24 -3.608 22.078 103.725 1.00 78.56 O
ATOM 5 O5' C B 24 -3.245 23.986 105.275 1.00 78.53 O
ATOM 6 C5' C B 24 -3.631 25.169 105.962 1.00 79.87 C
ATOM 7 C4' C B 24 -2.701 25.416 107.119 1.00 69.76 C
ATOM 8 O4' C B 24 -2.911 24.407 108.141 1.00 86.56 O
ATOM 9 C3' C B 24 -1.234 25.286 106.764 1.00 74.18 C
ATOM 10 O3' C B 24 -0.785 26.485 106.153 1.00 66.92 O
ATOM 11 C2' C B 24 -0.608 24.982 108.120 1.00 81.33 C
ATOM 12 O2' C B 24 -0.467 26.115 108.950 1.00 77.61 O
ATOM 13 C1' C B 24 -1.669 24.062 108.734 1.00 88.11 C
ATOM 14 N1 C B 24 -1.426 22.629 108.492 1.00 87.01 N
ATOM 15 C2 C B 24 -0.776 21.877 109.477 1.00 83.34 C
ATOM 16 O2 C B 24 -0.418 22.440 110.521 1.00 85.32 O
ATOM 17 N3 C B 24 -0.557 20.560 109.267 1.00 77.52 N
ATOM 18 C4 C B 24 -0.957 19.990 108.130 1.00 72.13 C
ATOM 19 N4 C B 24 -0.721 18.688 107.968 1.00 63.64 N
ATOM 20 C5 C B 24 -1.618 20.731 107.107 1.00 76.49 C
ATOM 21 C6 C B 24 -1.830 22.035 107.327 1.00 83.09 C
ATOM 22 P A B 25 0.670 26.548 105.488 1.00 76.02 P
ATOM 23 OP1 A B 25 0.813 27.843 104.772 1.00 92.10 O
ATOM 24 OP2 A B 25 0.931 25.286 104.763 1.00 66.34 O
ATOM 25 O5' A B 25 1.604 26.606 106.768 1.00 74.97 O
TER
ATOM 2 P A A 9 -0.715 33.321 113.498 1.00 98.62 P
ATOM 3 OP1 A A 9 -1.321 34.580 112.991 1.00104.28 O
ATOM 4 OP2 A A 9 -1.133 32.781 114.823 1.00 67.10 O
ATOM 5 O5' A A 9 -0.916 32.193 112.394 1.00 84.86 O
ATOM 6 C5' A A 9 -0.386 32.358 111.083 1.00 89.86 C
ATOM 7 C4' A A 9 -0.388 31.035 110.354 1.00101.53 C
ATOM 8 O4' A A 9 0.568 30.133 110.977 1.00102.43 O
ATOM 9 C3' A A 9 -1.709 30.285 110.402 1.00103.54 C
ATOM 10 O3' A A 9 -2.576 30.737 109.365 1.00105.53 O
ATOM 11 C2' A A 9 -1.258 28.845 110.184 1.00 98.35 C
ATOM 12 O2' A A 9 -0.981 28.580 108.826 1.00118.22 O
ATOM 13 C1' A A 9 0.051 28.812 110.978 1.00 87.28 C
ATOM 14 N9 A A 9 -0.129 28.394 112.369 1.00 84.30 N
ATOM 15 C8 A A 9 -0.222 29.201 113.476 1.00 84.07 C
ATOM 16 N7 A A 9 -0.404 28.544 114.596 1.00 83.21 N
ATOM 17 C5 A A 9 -0.424 27.214 114.203 1.00 79.00 C
ATOM 18 C6 A A 9 -0.582 26.022 114.923 1.00 80.83 C
ATOM 19 N6 A A 9 -0.754 25.976 116.243 1.00 79.30 N
ATOM 20 N1 A A 9 -0.557 24.861 114.232 1.00 79.53 N
ATOM 21 C2 A A 9 -0.384 24.911 112.909 1.00 71.53 C
ATOM 22 N3 A A 9 -0.223 25.970 112.118 1.00 78.20 N
ATOM 23 C4 A A 9 -0.252 27.105 112.835 1.00 78.09 C
ATOM 24 P G A 10 -4.128 31.027 109.686 1.00109.75 P
ATOM 25 OP1 G A 10 -4.703 31.714 108.501 1.00113.57 O
ATOM 26 OP2 G A 10 -4.222 31.665 111.025 1.00 98.53 O
ATOM 27 O5' G A 10 -4.787 29.582 109.792 1.00106.10 O
TER
ATOM 1 O3' A B 23 -5.569 23.213 104.761 1.00 77.97 O
ATOM 2 P C B 24 -4.128 23.420 104.083 1.00 82.68 P
ATOM 3 OP1 C B 24 -4.218 24.474 103.042 1.00 82.27 O
ATOM 4 OP2 C B 24 -3.608 22.078 103.725 1.00 78.56 O
ATOM 5 O5' C B 24 -3.245 23.986 105.275 1.00 78.53 O
ATOM 6 C5' C B 24 -3.631 25.169 105.962 1.00 79.87 C
ATOM 7 C4' C B 24 -2.701 25.416 107.119 1.00 69.76 C
ATOM 8 O4' C B 24 -2.911 24.407 108.141 1.00 86.56 O
ATOM 9 C3' C B 24 -1.234 25.286 106.764 1.00 74.18 C
ATOM 10 O3' C B 24 -0.785 26.485 106.153 1.00 66.92 O
ATOM 11 C2' C B 24 -0.608 24.982 108.120 1.00 81.33 C
ATOM 12 O2' C B 24 -0.467 26.115 108.950 1.00 77.61 O
ATOM 13 C1' C B 24 -1.669 24.062 108.734 1.00 88.11 C
ATOM 14 N1 C B 24 -1.426 22.629 108.492 1.00 87.01 N
ATOM 15 C2 C B 24 -0.776 21.877 109.477 1.00 83.34 C
ATOM 16 O2 C B 24 -0.418 22.440 110.521 1.00 85.32 O
ATOM 17 N3 C B 24 -0.557 20.560 109.267 1.00 77.52 N
ATOM 18 C4 C B 24 -0.957 19.990 108.130 1.00 72.13 C
ATOM 19 N4 C B 24 -0.721 18.688 107.968 1.00 63.64 N
ATOM 20 C5 C B 24 -1.618 20.731 107.107 1.00 76.49 C
ATOM 21 C6 C B 24 -1.830 22.035 107.327 1.00 83.09 C
ATOM 22 P A B 25 0.670 26.548 105.488 1.00 76.02 P
ATOM 23 OP1 A B 25 0.813 27.843 104.772 1.00 92.10 O
ATOM 24 OP2 A B 25 0.931 25.286 104.763 1.00 66.34 O
ATOM 25 O5' A B 25 1.604 26.606 106.768 1.00 74.97 O
TER
Atoms:
OP1: (-1.321,34.580,112.991)
OP2: (-1.133,32.781,114.823)
C3': (-1.709,30.285,110.402)
C1': (0.051,28.812,110.978)
C5': (-0.386,32.358,111.083)
O4': (0.568,30.133,110.977)
C8: (-0.222,29.201,113.476)
O2': (-0.981,28.580,108.826)
C6: (-0.582,26.022,114.923)
C5: (-0.424,27.214,114.203)
C4: (-0.252,27.105,112.835)
P: (-0.715,33.321,113.498)
C4': (-0.388,31.035,110.354)
C2': (-1.258,28.845,110.184)
C2: (-0.384,24.911,112.909)
N1: (-0.557,24.861,114.232)
N3: (-0.223,25.970,112.118)
N6: (-0.754,25.976,116.243)
N7: (-0.404,28.544,114.596)
N9: (-0.129,28.394,112.369)
O5': (-0.916,32.193,112.394)
O3': (-2.576,30.737,109.365)
OP2: (-1.133,32.781,114.823)
C3': (-1.709,30.285,110.402)
C1': (0.051,28.812,110.978)
C5': (-0.386,32.358,111.083)
O4': (0.568,30.133,110.977)
C8: (-0.222,29.201,113.476)
O2': (-0.981,28.580,108.826)
C6: (-0.582,26.022,114.923)
C5: (-0.424,27.214,114.203)
C4: (-0.252,27.105,112.835)
P: (-0.715,33.321,113.498)
C4': (-0.388,31.035,110.354)
C2': (-1.258,28.845,110.184)
C2: (-0.384,24.911,112.909)
N1: (-0.557,24.861,114.232)
N3: (-0.223,25.970,112.118)
N6: (-0.754,25.976,116.243)
N7: (-0.404,28.544,114.596)
N9: (-0.129,28.394,112.369)
O5': (-0.916,32.193,112.394)
O3': (-2.576,30.737,109.365)
C2: (-0.776,21.877,109.477)
OP1: (-4.218,24.474,103.042)
OP2: (-3.608,22.078,103.725)
C4: (-0.957,19.990,108.130)
O5': (-3.245,23.986,105.275)
C3': (-1.234,25.286,106.764)
C1': (-1.669,24.062,108.734)
O4': (-2.911,24.407,108.141)
C5': (-3.631,25.169,105.962)
P: (-4.128,23.420,104.083)
O2: (-0.418,22.440,110.521)
C4': (-2.701,25.416,107.119)
C2': (-0.608,24.982,108.120)
O2': (-0.467,26.115,108.950)
N1: (-1.426,22.629,108.492)
N3: (-0.557,20.560,109.267)
N4: (-0.721,18.688,107.968)
C6: (-1.830,22.035,107.327)
C5: (-1.618,20.731,107.107)
O3': (-0.785,26.485,106.153)
OP1: (-4.218,24.474,103.042)
OP2: (-3.608,22.078,103.725)
C4: (-0.957,19.990,108.130)
O5': (-3.245,23.986,105.275)
C3': (-1.234,25.286,106.764)
C1': (-1.669,24.062,108.734)
O4': (-2.911,24.407,108.141)
C5': (-3.631,25.169,105.962)
P: (-4.128,23.420,104.083)
O2: (-0.418,22.440,110.521)
C4': (-2.701,25.416,107.119)
C2': (-0.608,24.982,108.120)
O2': (-0.467,26.115,108.950)
N1: (-1.426,22.629,108.492)
N3: (-0.557,20.560,109.267)
N4: (-0.721,18.688,107.968)
C6: (-1.830,22.035,107.327)
C5: (-1.618,20.731,107.107)
O3': (-0.785,26.485,106.153)
Image (generated by PyMOL):