Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01040:01028
Extra
PDB:
ATOM 1 O3' C A1039 38.505 107.140 103.154 1.00 46.96 O
ATOM 2 P A A1040 37.593 106.853 101.871 1.00 49.04 P
ATOM 3 OP1 A A1040 37.574 108.090 101.045 1.00 49.54 O
ATOM 4 OP2 A A1040 36.309 106.262 102.337 1.00 47.95 O
ATOM 5 O5' A A1040 38.415 105.752 101.068 1.00 45.73 O
ATOM 6 C5' A A1040 38.595 104.440 101.605 1.00 41.77 C
ATOM 7 C4' A A1040 38.450 103.412 100.517 1.00 39.91 C
ATOM 8 O4' A A1040 39.421 103.676 99.480 1.00 39.78 O
ATOM 9 C3' A A1040 38.738 101.993 100.969 1.00 40.51 C
ATOM 10 O3' A A1040 37.554 101.419 101.508 1.00 40.65 O
ATOM 11 C2' A A1040 39.192 101.314 99.681 1.00 40.08 C
ATOM 12 O2' A A1040 38.121 100.923 98.843 1.00 39.34 O
ATOM 13 C1' A A1040 39.949 102.453 98.997 1.00 38.93 C
ATOM 14 N9 A A1040 41.398 102.467 99.207 1.00 36.32 N
ATOM 15 C8 A A1040 42.115 103.116 100.182 1.00 34.46 C
ATOM 16 N7 A A1040 43.411 102.983 100.057 1.00 33.95 N
ATOM 17 C5 A A1040 43.558 102.179 98.934 1.00 34.12 C
ATOM 18 C6 A A1040 44.690 101.669 98.269 1.00 33.52 C
ATOM 19 N6 A A1040 45.945 101.893 98.659 1.00 33.13 N
ATOM 20 N1 A A1040 44.483 100.905 97.176 1.00 33.38 N
ATOM 21 C2 A A1040 43.230 100.667 96.790 1.00 31.73 C
ATOM 22 N3 A A1040 42.092 101.082 97.330 1.00 32.77 N
ATOM 23 C4 A A1040 42.327 101.844 98.410 1.00 34.22 C
ATOM 24 P A A1041 37.477 101.052 103.069 1.00 38.87 P
ATOM 25 OP1 A A1041 36.073 101.342 103.462 1.00 38.20 O
ATOM 26 OP2 A A1041 38.594 101.695 103.810 1.00 37.47 O
ATOM 27 O5' A A1041 37.733 99.480 103.092 1.00 37.34 O
TER
ATOM 1 O3' C B1027 35.270 94.604 97.283 1.00 28.21 O
ATOM 2 P C B1028 35.113 95.582 96.032 1.00 28.35 P
ATOM 3 OP1 C B1028 33.888 96.393 96.257 1.00 23.76 O
ATOM 4 OP2 C B1028 35.248 94.761 94.799 1.00 25.22 O
ATOM 5 O5' C B1028 36.387 96.528 96.142 1.00 28.46 O
ATOM 6 C5' C B1028 36.465 97.545 97.158 1.00 28.66 C
ATOM 7 C4' C B1028 37.760 98.314 97.037 1.00 29.43 C
ATOM 8 O4' C B1028 38.883 97.452 97.353 1.00 28.69 O
ATOM 9 C3' C B1028 38.097 98.859 95.656 1.00 28.97 C
ATOM 10 O3' C B1028 37.429 100.085 95.407 1.00 28.68 O
ATOM 11 C2' C B1028 39.593 99.071 95.768 1.00 28.25 C
ATOM 12 O2' C B1028 39.868 100.218 96.536 1.00 30.28 O
ATOM 13 C1' C B1028 40.005 97.849 96.585 1.00 28.38 C
ATOM 14 N1 C B1028 40.431 96.719 95.749 1.00 28.81 N
ATOM 15 C2 C B1028 41.733 96.708 95.275 1.00 29.96 C
ATOM 16 O2 C B1028 42.464 97.679 95.523 1.00 31.91 O
ATOM 17 N3 C B1028 42.166 95.648 94.551 1.00 30.05 N
ATOM 18 C4 C B1028 41.339 94.635 94.291 1.00 27.83 C
ATOM 19 N4 C B1028 41.816 93.596 93.605 1.00 27.17 N
ATOM 20 C5 C B1028 39.991 94.638 94.730 1.00 28.69 C
ATOM 21 C6 C B1028 39.581 95.690 95.452 1.00 29.38 C
ATOM 22 P A B1029 37.013 100.472 93.908 1.00 28.67 P
ATOM 23 OP1 A B1029 36.412 101.827 93.973 1.00 26.35 O
ATOM 24 OP2 A B1029 36.231 99.355 93.333 1.00 28.05 O
ATOM 25 O5' A B1029 38.401 100.525 93.122 1.00 28.55 O
TER
ATOM 2 P A A1040 37.593 106.853 101.871 1.00 49.04 P
ATOM 3 OP1 A A1040 37.574 108.090 101.045 1.00 49.54 O
ATOM 4 OP2 A A1040 36.309 106.262 102.337 1.00 47.95 O
ATOM 5 O5' A A1040 38.415 105.752 101.068 1.00 45.73 O
ATOM 6 C5' A A1040 38.595 104.440 101.605 1.00 41.77 C
ATOM 7 C4' A A1040 38.450 103.412 100.517 1.00 39.91 C
ATOM 8 O4' A A1040 39.421 103.676 99.480 1.00 39.78 O
ATOM 9 C3' A A1040 38.738 101.993 100.969 1.00 40.51 C
ATOM 10 O3' A A1040 37.554 101.419 101.508 1.00 40.65 O
ATOM 11 C2' A A1040 39.192 101.314 99.681 1.00 40.08 C
ATOM 12 O2' A A1040 38.121 100.923 98.843 1.00 39.34 O
ATOM 13 C1' A A1040 39.949 102.453 98.997 1.00 38.93 C
ATOM 14 N9 A A1040 41.398 102.467 99.207 1.00 36.32 N
ATOM 15 C8 A A1040 42.115 103.116 100.182 1.00 34.46 C
ATOM 16 N7 A A1040 43.411 102.983 100.057 1.00 33.95 N
ATOM 17 C5 A A1040 43.558 102.179 98.934 1.00 34.12 C
ATOM 18 C6 A A1040 44.690 101.669 98.269 1.00 33.52 C
ATOM 19 N6 A A1040 45.945 101.893 98.659 1.00 33.13 N
ATOM 20 N1 A A1040 44.483 100.905 97.176 1.00 33.38 N
ATOM 21 C2 A A1040 43.230 100.667 96.790 1.00 31.73 C
ATOM 22 N3 A A1040 42.092 101.082 97.330 1.00 32.77 N
ATOM 23 C4 A A1040 42.327 101.844 98.410 1.00 34.22 C
ATOM 24 P A A1041 37.477 101.052 103.069 1.00 38.87 P
ATOM 25 OP1 A A1041 36.073 101.342 103.462 1.00 38.20 O
ATOM 26 OP2 A A1041 38.594 101.695 103.810 1.00 37.47 O
ATOM 27 O5' A A1041 37.733 99.480 103.092 1.00 37.34 O
TER
ATOM 1 O3' C B1027 35.270 94.604 97.283 1.00 28.21 O
ATOM 2 P C B1028 35.113 95.582 96.032 1.00 28.35 P
ATOM 3 OP1 C B1028 33.888 96.393 96.257 1.00 23.76 O
ATOM 4 OP2 C B1028 35.248 94.761 94.799 1.00 25.22 O
ATOM 5 O5' C B1028 36.387 96.528 96.142 1.00 28.46 O
ATOM 6 C5' C B1028 36.465 97.545 97.158 1.00 28.66 C
ATOM 7 C4' C B1028 37.760 98.314 97.037 1.00 29.43 C
ATOM 8 O4' C B1028 38.883 97.452 97.353 1.00 28.69 O
ATOM 9 C3' C B1028 38.097 98.859 95.656 1.00 28.97 C
ATOM 10 O3' C B1028 37.429 100.085 95.407 1.00 28.68 O
ATOM 11 C2' C B1028 39.593 99.071 95.768 1.00 28.25 C
ATOM 12 O2' C B1028 39.868 100.218 96.536 1.00 30.28 O
ATOM 13 C1' C B1028 40.005 97.849 96.585 1.00 28.38 C
ATOM 14 N1 C B1028 40.431 96.719 95.749 1.00 28.81 N
ATOM 15 C2 C B1028 41.733 96.708 95.275 1.00 29.96 C
ATOM 16 O2 C B1028 42.464 97.679 95.523 1.00 31.91 O
ATOM 17 N3 C B1028 42.166 95.648 94.551 1.00 30.05 N
ATOM 18 C4 C B1028 41.339 94.635 94.291 1.00 27.83 C
ATOM 19 N4 C B1028 41.816 93.596 93.605 1.00 27.17 N
ATOM 20 C5 C B1028 39.991 94.638 94.730 1.00 28.69 C
ATOM 21 C6 C B1028 39.581 95.690 95.452 1.00 29.38 C
ATOM 22 P A B1029 37.013 100.472 93.908 1.00 28.67 P
ATOM 23 OP1 A B1029 36.412 101.827 93.973 1.00 26.35 O
ATOM 24 OP2 A B1029 36.231 99.355 93.333 1.00 28.05 O
ATOM 25 O5' A B1029 38.401 100.525 93.122 1.00 28.55 O
TER
Atoms:
OP1: (37.574,108.090,101.045)
OP2: (36.309,106.262,102.337)
C3': (38.738,101.993,100.969)
C1': (39.949,102.453,98.997)
C5': (38.595,104.440,101.605)
O4': (39.421,103.676,99.480)
C8: (42.115,103.116,100.182)
O2': (38.121,100.923,98.843)
C6: (44.690,101.669,98.269)
C5: (43.558,102.179,98.934)
C4: (42.327,101.844,98.410)
P: (37.593,106.853,101.871)
C4': (38.450,103.412,100.517)
C2': (39.192,101.314,99.681)
C2: (43.230,100.667,96.790)
N1: (44.483,100.905,97.176)
N3: (42.092,101.082,97.330)
N6: (45.945,101.893,98.659)
N7: (43.411,102.983,100.057)
N9: (41.398,102.467,99.207)
O5': (38.415,105.752,101.068)
O3': (37.554,101.419,101.508)
OP2: (36.309,106.262,102.337)
C3': (38.738,101.993,100.969)
C1': (39.949,102.453,98.997)
C5': (38.595,104.440,101.605)
O4': (39.421,103.676,99.480)
C8: (42.115,103.116,100.182)
O2': (38.121,100.923,98.843)
C6: (44.690,101.669,98.269)
C5: (43.558,102.179,98.934)
C4: (42.327,101.844,98.410)
P: (37.593,106.853,101.871)
C4': (38.450,103.412,100.517)
C2': (39.192,101.314,99.681)
C2: (43.230,100.667,96.790)
N1: (44.483,100.905,97.176)
N3: (42.092,101.082,97.330)
N6: (45.945,101.893,98.659)
N7: (43.411,102.983,100.057)
N9: (41.398,102.467,99.207)
O5': (38.415,105.752,101.068)
O3': (37.554,101.419,101.508)
C2: (41.733,96.708,95.275)
OP1: (33.888,96.393,96.257)
OP2: (35.248,94.761,94.799)
C4: (41.339,94.635,94.291)
O5': (36.387,96.528,96.142)
C3': (38.097,98.859,95.656)
C1': (40.005,97.849,96.585)
O4': (38.883,97.452,97.353)
C5': (36.465,97.545,97.158)
P: (35.113,95.582,96.032)
O2: (42.464,97.679,95.523)
C4': (37.760,98.314,97.037)
C2': (39.593,99.071,95.768)
O2': (39.868,100.218,96.536)
N1: (40.431,96.719,95.749)
N3: (42.166,95.648,94.551)
N4: (41.816,93.596,93.605)
C6: (39.581,95.690,95.452)
C5: (39.991,94.638,94.730)
O3': (37.429,100.085,95.407)
OP1: (33.888,96.393,96.257)
OP2: (35.248,94.761,94.799)
C4: (41.339,94.635,94.291)
O5': (36.387,96.528,96.142)
C3': (38.097,98.859,95.656)
C1': (40.005,97.849,96.585)
O4': (38.883,97.452,97.353)
C5': (36.465,97.545,97.158)
P: (35.113,95.582,96.032)
O2: (42.464,97.679,95.523)
C4': (37.760,98.314,97.037)
C2': (39.593,99.071,95.768)
O2': (39.868,100.218,96.536)
N1: (40.431,96.719,95.749)
N3: (42.166,95.648,94.551)
N4: (41.816,93.596,93.605)
C6: (39.581,95.690,95.452)
C5: (39.991,94.638,94.730)
O3': (37.429,100.085,95.407)
Image (generated by PyMOL):