ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2589:A2587

Extra

PDB:
ATOM 1 O3' A A2588 121.277 -85.728 37.770 1.00 58.69 O
ATOM 2 P A A2589 119.986 -86.127 38.617 1.00 69.63 P
ATOM 3 OP1 A A2589 119.203 -87.078 37.804 1.00 94.75 O
ATOM 4 OP2 A A2589 119.339 -84.884 39.057 1.00 87.94 O
ATOM 5 O5' A A2589 120.627 -86.870 39.853 1.00 85.73 O
ATOM 6 C5' A A2589 121.453 -88.001 39.666 1.00 84.09 C
ATOM 7 C4' A A2589 121.261 -88.986 40.782 1.00 83.89 C
ATOM 8 O4' A A2589 122.364 -88.885 41.706 1.00 76.66 O
ATOM 9 C3' A A2589 120.041 -88.761 41.657 1.00 79.39 C
ATOM 10 O3' A A2589 118.841 -89.249 41.087 1.00 77.61 O
ATOM 11 C2' A A2589 120.440 -89.455 42.947 1.00 73.34 C
ATOM 12 O2' A A2589 120.332 -90.857 42.820 1.00 80.32 O
ATOM 13 C1' A A2589 121.909 -89.085 43.023 1.00 74.03 C
ATOM 14 N9 A A2589 122.087 -87.834 43.741 1.00 56.02 N
ATOM 15 C8 A A2589 122.514 -86.633 43.253 1.00 61.30 C
ATOM 16 N7 A A2589 122.537 -85.693 44.158 1.00 61.32 N
ATOM 17 C5 A A2589 122.080 -86.338 45.300 1.00 61.22 C
ATOM 18 C6 A A2589 121.859 -85.906 46.616 1.00 57.50 C
ATOM 19 N6 A A2589 122.066 -84.653 47.017 1.00 54.36 N
ATOM 20 N1 A A2589 121.400 -86.804 47.515 1.00 52.52 N
ATOM 21 C2 A A2589 121.178 -88.049 47.089 1.00 59.09 C
ATOM 22 N3 A A2589 121.338 -88.588 45.881 1.00 54.10 N
ATOM 23 C4 A A2589 121.796 -87.659 45.043 1.00 57.01 C
ATOM 24 P G A2590 117.509 -88.336 41.067 1.00 78.51 P
ATOM 25 OP1 G A2590 116.587 -88.946 40.091 1.00 87.41 O
ATOM 26 OP2 G A2590 117.927 -86.927 40.865 1.00 53.15 O
ATOM 27 O5' G A2590 116.942 -88.535 42.534 1.00 71.96 O
TER

ATOM 1 O3' C B2586 122.081 -76.711 43.568 1.00 60.00 O
ATOM 2 P U B2587 122.740 -76.451 42.135 1.00 37.30 P
ATOM 3 OP1 U B2587 124.195 -76.540 42.309 1.00 79.33 O
ATOM 4 OP2 U B2587 122.159 -75.204 41.600 1.00 74.35 O
ATOM 5 O5' U B2587 122.233 -77.691 41.301 1.00 55.33 O
ATOM 6 C5' U B2587 122.629 -77.890 39.958 1.00 61.35 C
ATOM 7 C4' U B2587 122.109 -79.200 39.446 1.00 71.05 C
ATOM 8 O4' U B2587 122.514 -80.235 40.376 1.00 69.44 O
ATOM 9 C3' U B2587 120.590 -79.291 39.354 1.00 60.62 C
ATOM 10 O3' U B2587 120.216 -80.201 38.320 1.00 54.18 O
ATOM 11 C2' U B2587 120.225 -79.886 40.703 1.00 57.46 C
ATOM 12 O2' U B2587 118.981 -80.539 40.733 1.00 64.12 O
ATOM 13 C1' U B2587 121.376 -80.863 40.920 1.00 67.29 C
ATOM 14 N1 U B2587 121.658 -81.173 42.343 1.00 59.49 N
ATOM 15 C2 U B2587 121.857 -82.493 42.767 1.00 55.36 C
ATOM 16 O2 U B2587 121.829 -83.477 42.063 1.00 50.56 O
ATOM 17 N3 U B2587 122.113 -82.651 44.100 1.00 58.02 N
ATOM 18 C4 U B2587 122.199 -81.659 45.043 1.00 59.52 C
ATOM 19 O4 U B2587 122.431 -81.963 46.205 1.00 58.50 O
ATOM 20 C5 U B2587 121.993 -80.339 44.542 1.00 62.50 C
ATOM 21 C6 U B2587 121.739 -80.141 43.244 1.00 61.92 C
ATOM 22 P A B2588 120.841 -80.085 36.854 1.00 57.85 P
ATOM 23 OP1 A B2588 121.653 -78.861 36.814 1.00117.60 O
ATOM 24 OP2 A B2588 119.738 -80.224 35.898 1.00122.21 O
ATOM 25 O5' A B2588 121.772 -81.365 36.790 1.00 63.33 O
TER

Atoms:
OP1: (119.203,-87.078,37.804)
OP2: (119.339,-84.884,39.057)
C3': (120.041,-88.761,41.657)
C1': (121.909,-89.085,43.023)
C5': (121.453,-88.001,39.666)
O4': (122.364,-88.885,41.706)
C8: (122.514,-86.633,43.253)
O2': (120.332,-90.857,42.820)
C6: (121.859,-85.906,46.616)
C5: (122.080,-86.338,45.300)
C4: (121.796,-87.659,45.043)
P: (119.986,-86.127,38.617)
C4': (121.261,-88.986,40.782)
C2': (120.440,-89.455,42.947)
C2: (121.178,-88.049,47.089)
N1: (121.400,-86.804,47.515)
N3: (121.338,-88.588,45.881)
N6: (122.066,-84.653,47.017)
N7: (122.537,-85.693,44.158)
N9: (122.087,-87.834,43.741)
O5': (120.627,-86.870,39.853)
O3': (118.841,-89.249,41.087)
C4: (122.199,-81.659,45.043)
N3: (122.113,-82.651,44.100)
OP1: (124.195,-76.540,42.309)
OP2: (122.159,-75.204,41.600)
C2: (121.857,-82.493,42.767)
C1': (121.376,-80.863,40.920)
C3': (120.590,-79.291,39.354)
O5': (122.233,-77.691,41.301)
O4': (122.514,-80.235,40.376)
C5': (122.629,-77.890,39.958)
P: (122.740,-76.451,42.135)
C4': (122.109,-79.200,39.446)
C2': (120.225,-79.886,40.703)
O2': (118.981,-80.539,40.733)
N1: (121.658,-81.173,42.343)
O4: (122.431,-81.963,46.205)
O2: (121.829,-83.477,42.063)
C6: (121.739,-80.141,43.244)
C5: (121.993,-80.339,44.542)
O3': (120.216,-80.201,38.320)
Image (generated by PyMOL):
PyMOL image
show in jmol